Difference between revisions of "BGIOSGA001524"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA001524| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001524, complete gene.| tag = OsI_021...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA001524|
 
GeneName = BGIOSGA001524|

Revision as of 18:11, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001524

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001524, complete gene.

LocusTag

OsI_02193

Ensembl Transcript ID

BGIOSGA001524-TA

Ensembl Protein ID

BGIOSGA001524-PA

Length

2341

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20476038..20478378

Sequence Coding Region

20478223..20478378,20477379..20478036,20476038..20477155

Genome Context

<gbrowseImage1> name=IndicaChromosome01:20476038..20478378 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:20476038..20478378 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGTTTTATAAACCTAAACGGAAAGCTCAAGATATGATCGATGGTAACGGAACTTCATGTCCGGAGGAGATCAATTGGGATGAGGAGATTAAATATGATCCCGGATTGAGGAAAGAAATTGATGCTTACCATCCTAACCACAGAGAAAAGAAAGATCCAGGATATGATGCATTTGTTGTCAACGGTTGGAATGGGTATCATAGGAAAGAAAGGCTAAGATCACATGTTGGTGAGGTTGGTGGTTTACACTATAATGCAATGAAGAAATGTGATGCTTTGAGAAATAGAAAGCAACACATAGATGTTGCTTATAATCAGATAAGTGAAGTTGCTAAGAAGGCCTATTTTATTCGGTTGAATGGTTCCATTGATACAGCTAGAGTATTGTTGAAGCAAGGATTGCCTTTTCGTGGCCATGATGAGTCAAAAGAATCCTACAATAGAGGGAATTTTAAGGAGTTCTATGATTGCTTAGCAGAACATGATCCAATTTTACACAAAGCCGTGACTACAAATGCTGCAAAGAATAGTTGTTTGTATGCTCCTGAAATTCAGAGGGACATTGCTGAATGTTTTGCAAATGAGATTGTACAGTCTATCCTGGATGATCTTGGGGATGATTTCTTTTGCTTGCTAGTTGATGAGTCAAGAAATGTTTCTTGCAAAGAACAAATGGCTGTGTTCTTGAGGTATGTTGACAAATTTGGGATGGTGAAAGAGAGCTTCGTTGGCCTTGTCCATGTGACTGAAACAAGTTCTGCCCACCTCAAGTCAGCCATTGATTCTCTTCTTGCAAAGTTTAAACTAACTAAGAGAAGGGACATGATTAGAGATATCAATCATGAACAAGTGCAGCAAGCATTAGGTTGTGGGCAACTTGAGACCGGGATAGGGTTAAATCAAGAGCAATGTCTTCAAAGACCTGGAGATACTAGATGGAGTTCTCATTATAAAACTCTGAAAAGTTTGCTTAATATGTTCCCTACAATAGTTCAAGTGCTCAAGGTTGTTGAGAAGGATGACAGAGATTGGAAAAATAGAGATCAAGCATCAAATCTTTTGGTATACTTCCAATCTTTTGACTTTGTATTTTATTTGCACCTCATGTTGACTACATTAGCTGCCACAAATACATTGTCGCAAGCATTGCAACGCAAGGATCAAGACATTGTAAATGCCATTGGATGTCTGAAATCAACTAAACTCCATTTGGATGATCTTAGAACAAATGGTTGGGAAAAGTTATTAGATGATGTGAATCAGTTTTGTGACTTGTATGAAATTGATATGATGGAAATGGAAAGTACATATGTTGATCCCAGACAACCTAGGAAAAAATCAGGAATTACAAACAAGCATCACTATGCAGTGGATTGCTTTAATGATGTTATTGATTGGTTGGTTCAAGAGCTTGATAGCCGTTTTAGTGAGACAACCACTCAATTGCTTGTTTGCTCAGCCGCTTTCAACCCAAGAGACTCATTTCATGCTTTCGATGGAGAGACTTTGATGAGCTTAGCAAAACTATATCCTGATGATTTCAACAATGATGATCTGAGGGACCTTAGACATGACCTTCGCCTTTACATTGGTGATGTGAGAGAAGACAACGAATTCTCCAACATAAACACTATTGCTGAGCTATCTCAAAAGATGGTACAGACAGGAAAACATCAAGTGTATAGATTGGTCTATCGACTTTTGAAGCTTGTGCTAGTATTGCCTGTCGCTACAGCAACAGTTGAGAGATGTTTTTCGGGCATGAAGATTGTAAAAACAAGCTTGGCTAATCGTATGGGTGATCAACAATTGAGTCATAGACTTATTTGCTATATAGAGAAAGAGGAAATGAAAAAAGTTAGCAATGAGGCTGTGGTTCATCGTTTCATGACCATGGAAGGAAAAGGGCGCAAATATGATCTCTAA</cdnaseq>

Protein Sequence

<aaseq>MERFYKPKRKAQDMIDGNGTSCPEEINWDEEIKYDPGLRKEIDAYHPNHREKKDPGYDAFVVNGWNGYHRKERLRSHVGEVGGLHYNAMKKCDALRNRKQHIDVAYNQISEVAKKAYFIRLNGSIDTARVLLKQGLPFRGHDESKESYNRGNFKEFYDCLAEHDPILHKAVTTNAAKNSCLYAPEIQRDIAECFANEIVQSILDDLGDDFFCLLVDESRNVSCKEQMAVFLRYVDKFGMVKESFVGLVHVTETSSAHLKSAIDSLLAKFKLTKRRDMIRDINHEQVQQALGCGQLETGIGLNQEQCLQRPGDTRWSSHYKTLKSLLNMFPTIVQVLKVVEKDDRDWKNRDQASNLLVYFQSFDFVFYLHLMLTTLAATNTLSQALQRKDQDIVNAIGCLKSTKLHLDDLRTNGWEKLLDDVNQFCDLYEIDMMEMESTYVDPRQPRKKSGITNKHHYAVDCFNDVIDWLVQELDSRFSETTTQLLVCSAAFNPRDSFHAFDGETLMSLAKLYPDDFNNDDLRDLRHDLRLYIGDVREDNEFSNINTIAELSQKMVQTGKHQVYRLVYRLLKLVLVLPVATATVERCFSGMKIVKTSLANRMGDQQLSHRLICYIEKEEMKKVSNEAVVHRFMTMEGKGRKYDL</aaseq>

Gene Sequence

<dnaseqindica>1..156#343..1000#1224..2341#ATGGAGAGGTTTTATAAACCTAAACGGAAAGCTCAAGATATGATCGATGGTAACGGAACTTCATGTCCGGAGGAGATCAATTGGGATGAGGAGATTAAATATGATCCCGGATTGAGGAAAGAAATTGATGCTTACCATCCTAACCACAGAGAAAAGGTGAGAAGAAAATACTTGGAGAATGGACCTGTCAGCCTCGCACATTTGATTTTCCTATTACACAACTTGGGGGGAAAGAGAACCTAGAAGATTAATCCAGAATGGTTTGATGAGTTCTCTTGGCTTGAATACAGTAAGGAAAAGGATAGAGCATATTGCTTTTATTGTTTCTTGTTTAGAGAAAAGAAAGATCCAGGATATGATGCATTTGTTGTCAACGGTTGGAATGGGTATCATAGGAAAGAAAGGCTAAGATCACATGTTGGTGAGGTTGGTGGTTTACACTATAATGCAATGAAGAAATGTGATGCTTTGAGAAATAGAAAGCAACACATAGATGTTGCTTATAATCAGATAAGTGAAGTTGCTAAGAAGGCCTATTTTATTCGGTTGAATGGTTCCATTGATACAGCTAGAGTATTGTTGAAGCAAGGATTGCCTTTTCGTGGCCATGATGAGTCAAAAGAATCCTACAATAGAGGGAATTTTAAGGAGTTCTATGATTGCTTAGCAGAACATGATCCAATTTTACACAAAGCCGTGACTACAAATGCTGCAAAGAATAGTTGTTTGTATGCTCCTGAAATTCAGAGGGACATTGCTGAATGTTTTGCAAATGAGATTGTACAGTCTATCCTGGATGATCTTGGGGATGATTTCTTTTGCTTGCTAGTTGATGAGTCAAGAAATGTTTCTTGCAAAGAACAAATGGCTGTGTTCTTGAGGTATGTTGACAAATTTGGGATGGTGAAAGAGAGCTTCGTTGGCCTTGTCCATGTGACTGAAACAAGTTCTGCCCACCTCAAGTCAGCCATTGATTCTCTTCTTGCAAAGTTTAAACTAAGTTTAAAGCAATGTTGAGGCCAAGGATATGATGGTGCTAGCAACATGCGAGGTGAGTTCAATGGGTTGCAGTCATTGATCATGAGAGATAGCAAATCAGCTTATTATGTGCATTGCTTTGCTCATCAACTTCAATTAGTTATTGTGGCAACCGTGAGAAAACATAAGGGCGTTAGCATTTTTTAATATGATTTCTATCTTATCAAATGTGGTGGGTGGGTCAGCTAAGAGAAGGGACATGATTAGAGATATCAATCATGAACAAGTGCAGCAAGCATTAGGTTGTGGGCAACTTGAGACCGGGATAGGGTTAAATCAAGAGCAATGTCTTCAAAGACCTGGAGATACTAGATGGAGTTCTCATTATAAAACTCTGAAAAGTTTGCTTAATATGTTCCCTACAATAGTTCAAGTGCTCAAGGTTGTTGAGAAGGATGACAGAGATTGGAAAAATAGAGATCAAGCATCAAATCTTTTGGTATACTTCCAATCTTTTGACTTTGTATTTTATTTGCACCTCATGTTGACTACATTAGCTGCCACAAATACATTGTCGCAAGCATTGCAACGCAAGGATCAAGACATTGTAAATGCCATTGGATGTCTGAAATCAACTAAACTCCATTTGGATGATCTTAGAACAAATGGTTGGGAAAAGTTATTAGATGATGTGAATCAGTTTTGTGACTTGTATGAAATTGATATGATGGAAATGGAAAGTACATATGTTGATCCCAGACAACCTAGGAAAAAATCAGGAATTACAAACAAGCATCACTATGCAGTGGATTGCTTTAATGATGTTATTGATTGGTTGGTTCAAGAGCTTGATAGCCGTTTTAGTGAGACAACCACTCAATTGCTTGTTTGCTCAGCCGCTTTCAACCCAAGAGACTCATTTCATGCTTTCGATGGAGAGACTTTGATGAGCTTAGCAAAACTATATCCTGATGATTTCAACAATGATGATCTGAGGGACCTTAGACATGACCTTCGCCTTTACATTGGTGATGTGAGAGAAGACAACGAATTCTCCAACATAAACACTATTGCTGAGCTATCTCAAAAGATGGTACAGACAGGAAAACATCAAGTGTATAGATTGGTCTATCGACTTTTGAAGCTTGTGCTAGTATTGCCTGTCGCTACAGCAACAGTTGAGAGATGTTTTTCGGGCATGAAGATTGTAAAAACAAGCTTGGCTAATCGTATGGGTGATCAACAATTGAGTCATAGACTTATTTGCTATATAGAGAAAGAGGAAATGAAAAAAGTTAGCAATGAGGCTGTGGTTCATCGTTTCATGACCATGGAAGGAAAAGGGCGCAAATATGATCTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001524