Difference between revisions of "BGIOSGA002804"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA002804| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002804, complete gene.| tag = OsI_004...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA002804|
 
GeneName = BGIOSGA002804|

Revision as of 18:19, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA002804

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002804, complete gene.

LocusTag

OsI_00432

Ensembl Transcript ID

BGIOSGA002804-TA

Ensembl Protein ID

BGIOSGA002804-PA

Length

3286

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3289134..3292419

Sequence Coding Region

3289134..3290160,3290350..3291018,3291995..3292419

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3289134..3292419 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3289134..3292419 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGGCTCGTGCTAGCTTCCTGCTGCTGCTGTCCATCTTCTTGCACTTCATGGCAGTGCGAGGAGCAGACGGAGAAGACGCCGCAGCGTTGCTCGCTTTCAAGGCCGCGGCGGTGGGCAACGGTGGTGGCAACGGCGTGCTTGCGTCGTGGAACGGCAGCGCCGGGCCGTGCAGCTGGGAGGGCGTGGCGTGTGGCCGGCACGGGCGGGTGGTGGCGCTTAGCCTGCCCGGGCATGATCTCTCCGGGACCCTGTCGCCGGCCGTCGGCAACCTGACATCGTTGCGGAAACTCAACCTGAGTTTGAACTGGCTTCACGGTGCCATCCCCGCGAGCCTCGGGCGCCTGCGTCGCCTCAGAACACTCGTTCTGAGCTTCAACACCTTCTCCGGCGAGGTCCCCGGCAACCTGACCTCCTGCACCAGCTTGGAAAAGCTGGTCCTCGGCAGCAACAAGCTCACCGGGAACATACCCGCTGAGCTCGGCAACACGCTGACACGGCTCCAGGTGCTAGGCCTCGACAACAACAGCTTCGTCGGCCATTGGCCGGCTTCACTGGCCAACCTGACGTCCCTGGGATTACTCAACCTCAGGATGAACAGTCTCGAGGGCACAATACCTCCTGAATTCGGCAGCAACATGCCGCGCCTTCTCTCCATAGACATCTGCTCCAACAACCTGAGCGGTGCACTCCCGTCTTCCCTGTACAATCTGTCGTCGCTAAAGGTCTTTGACGCAGGAAACAACTATCTGAATGGAACCATTGCTGCTGATATCGGTGAAAAGCTCCCTAGTCTGCAGTATTTTGGAGTGTTCAACAACCGGTTCAGCGGGGAAATTCCTTCCTCGTTCACCAATCTCACTAACCTCACAAGTCTGCAGCTGTCAGAAAATGGATTTAGTGGCTTTGTGCCACGTGATCTAGGGAGGTTGAATGCTCTGCAGAATCTGCAACTAGCTGTTAATATGCTTGAAGCAGGGGACATGAAGGGGTGGGAATTTGTTGATTCATTGGCGAACTGCAGTGTAATTCCAGAGAGCATTGGGAAGCTGGAAAACTTGACTACGCTATACCTGAATTACAATAGCTTGTCTGGCCATGTACCGTCTTCTGTGGGAAACCTCACCAATCTGATGAAGCTATTCATGCAAGGCAACAACTTGGAAGGACCAATCCCGGCGAATCTTGGTAAGCTGGAAAGCCTGAATGTTCTTGATTTATCAAGAAATCACTTCAATGGTTCGATTCCAAAGGAAATATTGGAGCTACCTTCCATTTCACAGTACTTGAATTTATCATACAACTCCCTCTCTGGACCCCTTCCTTCTGAAGTTGGGAGTTTGACTAGCCTCAACGAGTTGGTTCTGTCAGGAAACCAATTGTCTGGCCAGATACCAAGTAGTATAAAAAATTGCATAGTGCTCACTGTACTGTTATTGGACAGTAACTCGTTCCAAGGAACTATACCTGTGTTTCTGGAGGACATTAAGGGGCTCCGTGTACTTAACCTAACCATGAACAAGTTTTCTGGTGTGATTCCTGATGCCCTTGGTAGCATCCACAACCTGCAAGAGTTGTATCTAGCGTATAACAACTTGTCTGGGCCTATCCCTGCAGTGCTGCAGAATTTGACATCGTTATCAATGCTGGATCTATCCTTCAATGATCTTCAAGGTGAAGTGCCAAAAGAAGAGTATGGGGAAGGCTCTGCGGTCTCAACTCTTGGCGATGTTTATAGTCTGGGCATATTGCTGCTTGAGATGTTTACAGGAATGAGCCCAACAGACGATATGTTCAGAGATTCATTGGACCTGCACAGTTTCTCAGAGGCTGCTCATCCTGACAGAATCCTGGAGATAGCCGATCCGACGCTCTGGGTGCATGTAGACGCCGAGGATAGCATCACAAGGAGCAGAATGCAGGAGTGTTTGATTTCAGTCATTGGCCTCGGCTTGTCCTGCTCAAAGCATCAACCCAGAGAGCGAATGCCAATACAAGATGCAGCCCTGAAGATGCATGCGATCAGAGACGACGCTTACCAGATGTTTTCTGGCTCTCTTTCAGTGGACATGGAAGAGGAGACGAAACAGATTAGCAGCGATTTGAAGCAACAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAMARASFLLLLSIFLHFMAVRGADGEDAAALLAFKAAAVGNGGGNGVLASWNGSAGPCSWEGVACGRHGRVVALSLPGHDLSGTLSPAVGNLTSLRKLNLSLNWLHGAIPASLGRLRRLRTLVLSFNTFSGEVPGNLTSCTSLEKLVLGSNKLTGNIPAELGNTLTRLQVLGLDNNSFVGHWPASLANLTSLGLLNLRMNSLEGTIPPEFGSNMPRLLSIDICSNNLSGALPSSLYNLSSLKVFDAGNNYLNGTIAADIGEKLPSLQYFGVFNNRFSGEIPSSFTNLTNLTSLQLSENGFSGFVPRDLGRLNALQNLQLAVNMLEAGDMKGWEFVDSLANCSVIPESIGKLENLTTLYLNYNSLSGHVPSSVGNLTNLMKLFMQGNNLEGPIPANLGKLESLNVLDLSRNHFNGSIPKEILELPSISQYLNLSYNSLSGPLPSEVGSLTSLNELVLSGNQLSGQIPSSIKNCIVLTVLLLDSNSFQGTIPVFLEDIKGLRVLNLTMNKFSGVIPDALGSIHNLQELYLAYNNLSGPIPAVLQNLTSLSMLDLSFNDLQGEVPKEEYGEGSAVSTLGDVYSLGILLLEMFTGMSPTDDMFRDSLDLHSFSEAAHPDRILEIADPTLWVHVDAEDSITRSRMQECLISVIGLGLSCSKHQPRERMPIQDAALKMHAIRDDAYQMFSGSLSVDMEEETKQISSDLKQQ</aaseq>

Gene Sequence

<dnaseqindica>1..1027#1217..1885#2862..3286#ATGGCGATGGCTCGTGCTAGCTTCCTGCTGCTGCTGTCCATCTTCTTGCACTTCATGGCAGTGCGAGGAGCAGACGGAGAAGACGCCGCAGCGTTGCTCGCTTTCAAGGCCGCGGCGGTGGGCAACGGTGGTGGCAACGGCGTGCTTGCGTCGTGGAACGGCAGCGCCGGGCCGTGCAGCTGGGAGGGCGTGGCGTGTGGCCGGCACGGGCGGGTGGTGGCGCTTAGCCTGCCCGGGCATGATCTCTCCGGGACCCTGTCGCCGGCCGTCGGCAACCTGACATCGTTGCGGAAACTCAACCTGAGTTTGAACTGGCTTCACGGTGCCATCCCCGCGAGCCTCGGGCGCCTGCGTCGCCTCAGAACACTCGTTCTGAGCTTCAACACCTTCTCCGGCGAGGTCCCCGGCAACCTGACCTCCTGCACCAGCTTGGAAAAGCTGGTCCTCGGCAGCAACAAGCTCACCGGGAACATACCCGCTGAGCTCGGCAACACGCTGACACGGCTCCAGGTGCTAGGCCTCGACAACAACAGCTTCGTCGGCCATTGGCCGGCTTCACTGGCCAACCTGACGTCCCTGGGATTACTCAACCTCAGGATGAACAGTCTCGAGGGCACAATACCTCCTGAATTCGGCAGCAACATGCCGCGCCTTCTCTCCATAGACATCTGCTCCAACAACCTGAGCGGTGCACTCCCGTCTTCCCTGTACAATCTGTCGTCGCTAAAGGTCTTTGACGCAGGAAACAACTATCTGAATGGAACCATTGCTGCTGATATCGGTGAAAAGCTCCCTAGTCTGCAGTATTTTGGAGTGTTCAACAACCGGTTCAGCGGGGAAATTCCTTCCTCGTTCACCAATCTCACTAACCTCACAAGTCTGCAGCTGTCAGAAAATGGATTTAGTGGCTTTGTGCCACGTGATCTAGGGAGGTTGAATGCTCTGCAGAATCTGCAACTAGCTGTTAATATGCTTGAAGCAGGGGACATGAAGGGGTGGGAATTTGTTGATTCATTGGCGAACTGCAGTAAGCTAGTGACTTTAGCTCTCAGTAACAATAATTTCACAGGGCAGTTCCCTATTTCGATTGTAAACCTCTCGACGACTCTCCAAACACTTTACTTGGGTGGCAGTAGGATTTCTGGAAGCATCCCCTCTGATTTCGGTAATTTGGTTGGTCTAAGATCATTATACCTGTTTAGTACTGACATATCAGGTGTAATTCCAGAGAGCATTGGGAAGCTGGAAAACTTGACTACGCTATACCTGAATTACAATAGCTTGTCTGGCCATGTACCGTCTTCTGTGGGAAACCTCACCAATCTGATGAAGCTATTCATGCAAGGCAACAACTTGGAAGGACCAATCCCGGCGAATCTTGGTAAGCTGGAAAGCCTGAATGTTCTTGATTTATCAAGAAATCACTTCAATGGTTCGATTCCAAAGGAAATATTGGAGCTACCTTCCATTTCACAGTACTTGAATTTATCATACAACTCCCTCTCTGGACCCCTTCCTTCTGAAGTTGGGAGTTTGACTAGCCTCAACGAGTTGGTTCTGTCAGGAAACCAATTGTCTGGCCAGATACCAAGTAGTATAAAAAATTGCATAGTGCTCACTGTACTGTTATTGGACAGTAACTCGTTCCAAGGAACTATACCTGTGTTTCTGGAGGACATTAAGGGGCTCCGTGTACTTAACCTAACCATGAACAAGTTTTCTGGTGTGATTCCTGATGCCCTTGGTAGCATCCACAACCTGCAAGAGTTGTATCTAGCGTATAACAACTTGTCTGGGCCTATCCCTGCAGTGCTGCAGAATTTGACATCGTTATCAATGCTGGATCTATCCTTCAATGATCTTCAAGGTGAAGTGCCAAAAGAAGGTATTTTTAAGAACTTATCTTACTTGTCTTTAGCTGGAAACAGTGAGCTTTGTGGGGGAATATCTCATCTTAACTTACCTCCATGCTCCACGCATGCTGTTAGAAAGATAAGCAAAGGGTGGTTAAGGTCTCTTAAAATAGCTCTGGCATCAATAGCTGTGGTCTTGTTCTTAGCTCTAGTTATGGTGATTATTATGTTAATTCGTCATAGAAAGCCTGTACATAGGAAGAAGGGCCAGTCCCTAACCCCAGTTGTGGAGGAACAATTTGAAAGAGTTTCTTACCAGGAATTGTCAAATGGAACCAAGGGATTTTCACAGAACAGTTTGATTGGAAAAGGAAGCTATGGTGTAGTCTATAAATGCGCTTTGTTTGATGAGGAAATTATTGTCGCTGTAAAGGTGTTTAACCTTGAACAGTCTGGATCTACTAGAAGTTTTGTGGCAGAATGCGAGGCACTGAGAAGTGTGCGCCACCGTTGTCTCCTAAAGATCATCACTTGCTGCTCAAGCATAAATAACCAAGGTCAAGATTTCAAGGCACTAGTTTTTGAGTTTATGCCCAATGGCAGCTTAAATGGTTGGCTTCATCCAAAATCTGATATGCCCATTGTTGACAATACTTTGAGCCTAACTCAAAGGCTGGACATTGCTGTTGATATTGTGGATGCTCTGGAATATCTTCATATCCACTGCCAGCCGCCGATCGTTCATTGTGATCTCAAGCCAAGCAACATCCTTCTTGCAGAAGACATGAGTGCCCGAGTTGGAGATTTCGGCATATCAAGAATCCTAACTGAAAGCGCGAGCAAAACACAGCAAAATTCAAGCAACACAATCGGAATAAGAGGCTCCATTGGCTATGTTGCTCCAGGTAACTGAATTGTTGTGCTTTGTTTCTTTGCTTTTTACCTCCTAGTTCTTACACAAATTTAACATTCTGGTGAATCTAATGAACTCCTGCAAAATATTTGTAGAGTATGGGGAAGGCTCTGCGGTCTCAACTCTTGGCGATGTTTATAGTCTGGGCATATTGCTGCTTGAGATGTTTACAGGAATGAGCCCAACAGACGATATGTTCAGAGATTCATTGGACCTGCACAGTTTCTCAGAGGCTGCTCATCCTGACAGAATCCTGGAGATAGCCGATCCGACGCTCTGGGTGCATGTAGACGCCGAGGATAGCATCACAAGGAGCAGAATGCAGGAGTGTTTGATTTCAGTCATTGGCCTCGGCTTGTCCTGCTCAAAGCATCAACCCAGAGAGCGAATGCCAATACAAGATGCAGCCCTGAAGATGCATGCGATCAGAGACGACGCTTACCAGATGTTTTCTGGCTCTCTTTCAGTGGACATGGAAGAGGAGACGAAACAGATTAGCAGCGATTTGAAGCAACAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002804