Difference between revisions of "BGIOSGA009616"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA009616|
Description = Putative uncharacterized protein|
Definition = Oryza sativa Indica Group BGIOSGA009616, complete gene.|
tag = OSJNBA0...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA009616| | GeneName = BGIOSGA009616| | ||
Revision as of 15:30, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA009616 |
|---|---|
| Description |
Putative uncharacterized protein |
| Definition |
Oryza sativa Indica Group BGIOSGA009616, complete gene. |
| LocusTag |
OSJNBA0087C10.4 |
| Ensembl Transcript ID |
BGIOSGA009616-TA |
| Ensembl Protein ID |
BGIOSGA009616-PA |
| Length |
5973 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:37855666..37861638 |
| Sequence Coding Region |
37861505..37861638,37861334..37861391,37861122..37861226,37860732..37860789,37860472..37860647 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome03:37855666..37861638 source=RiceIndica03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome03:37855666..37861638 source=RiceIndica03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGCCCCTCCGAACACTCGTTATCTTCCTCCTCCTCCTCCTCGCGCTCGTCCCGGCACTCTCGCGCCCGGATGGCGGCGGCGGCGGCTTCTATGACCCGGCGCGCGTCACCCAGCTATCCTGGCGCCCCAGGGCGTTCCTGTACAGCGGCTTCCTCTCGCACGACGAGTGCGACCACCTCGTCAATCTGGCGAAGGGGAGGATGGAGAAGTCGATGGTTGCAGACAATGATTCCGGCAAGAGTATCATGAGCCAGGTGCGCACCAGCTCCGGCACCTTCTTATCGAAGCACGAGGACGACATTGTTTCTGGAATTGAAAAGCGTGTAGCTGCTTGGACATTTCTTCCTGAAGAAAACGCCGAGTCAATTCAGATTCTGCATTATGAGCTTGGTCAGAAGTATGATGCCCACTTCGATTATTTCCATGACAAGAACAACCTTAAGCGTGGGGGTCATCGAGTCGCCACTGTGCTTATGTACTTGACCGATGTCAAAAAGGGTGGAGAGACTGTATTTCCAAATGCTGCGGGAAGGCATTTACAACTCAAGGATGAAACTTGGTCTGATTGTGCAAGATCTGGCCTGGCAGTGAAGCCAAAGAAAGGCGATGCGCTACTGTTCTTCAGTCTCCATGTTAACGCGACAACGGATCCAGCCAGTCTTCATGGAAGCTGTCCGGTGATCGAAGGCGAGAAATGGTCTGCAACGAAATGGATCCATGTCAGATCATTTGATAATCCTCCGGATGTAAGCCTGGATTTGCCGTGTTCCGATGAAAACGAGCGCTGCACGAGATGGGCTGCTGTTGGAGAGTGTTACAGGAACCCAAAATACATGGTTGGCACCAAGGATTCGCTCGGATTCTGCCGCAAGAGCTGCGGGGTATGCAGCAGATCACTTGGGAAAGATATTGGATTCAAAATAAAGGTATCACATAGTGATGCTTTGATGATCCTCAAATCCTGGATTGCTTCACAGACTTCTTTTAGTGCAAGTATGGACCAGATGTGCAAATTCTACACCTTTGTGTCAGAAGGTTTTGCCACTGCAACGATTGACATTAAACGGGAGTTTTTGTCTTGCTCCTCTATATTTACACCATTAAACCGTGCTCGATCTAATGATTTTGTTCCTGGAAAATTCTTGTCCCCAAAAGATCTGTATTGGCATGACCCAACAGGCTGTTCTGAAATAATAACAGAGAAAGTCATTTCAATGAAGAATAAGATTAGTATGTTCCCAAGAAAGATGCTATCTTCAGCCTATCCCAGCCTTTGCGAATTCTTTACTGAGGCATGTGGTGTACCAAAGGTTCCCAAGACATCTGACTATGTTGATATACTTTTAGGGCTGTCGAATGCTGCATTACCTTCAGAAGTAGCCAATCAGGTCTTTCATGTGTTTGCGAGGTGGGCTAATGATCTCCATTCTGCAAATGACAATATGAATGATATATTGTTCTTGGAAGGATCTCTTCAAAAGTTGGAGACAACAATACTGCCAACCTTGGGTGATAAATGGGTCTCTCTCCATCCTTCTTTTGGCCTTGTTTGCTGGGTAGATGATAATGAGTTGATGCAACACTTTGAGGACTACAATGGTGTTAACTTCATACAATTTGGAGAACTTTCTTATGAAGACAAGCAACTGCTGTATGGAAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATTTATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCAACCAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCTATTGCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAATTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAACTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTTTGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATATGGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTCAGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTCGGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAGAATTGGCAAGCAAGGGGAAGCTGCAGCCCACCAACATTTTGTTGATCATTTTGGATCCAATAATGTCAGGTGGGTGAATCAAGAAAATGAAACGGGGTTGCCTTATGACATTGTTGTCACACACAAATCGGGTTTCACAGAATATGTGGAGGTGAAGGCAACAACAAATTCATACAAAAATTGGTTCTACATTACATTGAGGGAATGGCAGTTTGCATTAGAAAAAGGCAATGCCTTTACCATTGCTCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAAGAATCCATACAAACTTTGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCAATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCATTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MAPLRTLVIFLLLLLALVPALSRPDGGGGGFYDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSSGTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRGGHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPKKGDALLFFSLHVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNPPDVSLDLPCSDENERCTRWAAVGECYRNPKYMVGTKDSLGFCRKSCGVCSRSLGKDIGFKIKVSHSDALMILKSWIASQTSFSASMDQMCKFYTFVSEGFATATIDIKREFLSCSSIFTPLNRARSNDFVPGKFLSPKDLYWHDPTGCSEIITEKVISMKNKISMFPRKMLSSAYPSLCEFFTEACGVPKVPKTSDYVDILLGLSNAALPSEVANQVFHVFARWANDLHSANDNMNDILFLEGSLQKLETTILPTLGDKWVSLHPSFGLVCWVDDNELMQHFEDYNGVNFIQFGELSYEDKQLLYGRIAALLKSLGIPALSKVIYREAIFYGTVDNREKVTVISWLLPYMQRYIYKMHRDTYVNFQPNEITKLSNLQVIVVEKLFHKYKLKERESSCKRRFKCNCLLQGNNLYATQEADSHSLFLELSRLFFDGSPDLHFANFLHMVKTMADSGTTAEQIESFIVNNQNVPDLPEHEAVWSFSSLIIADQDVDCQRTEFQSICDSQKTEIRSTCELNISKHQRTSGVASSWPPNDWKTAPDFITSHNSQFTPNQETNLNNVVPSLDLTKTQCENSEDIVGPVDLEGDWITEDDFGSENTVLAERIGATGDEPHMVMSINSANLPAYLDLETGSSANSVVDIELTEFNDKLANVSEKRDRLCIKAPDRDKLLRIGKQGEAAAHQHFVDHFGSNNVRWVNQENETGLPYDIVVTHKSGFTEYVEVKATTNSYKNWFYITLREWQFALEKGNAFTIARVVLKDSKKANDKSNVLILKNPYKLCLNKSVYLALIIPQQYQTKRRYFEGNSDLQSEVNH</aaseq> |
| Gene Sequence |
<dnaseqindica>1..134#248..305#413..517#850..907#992..1167#1247..1307#1432..1724#2192..2304#2492..2885#3084..3401#4164..4421#4753..5973#ATGGCGCCCCTCCGAACACTCGTTATCTTCCTCCTCCTCCTCCTCGCGCTCGTCCCGGCACTCTCGCGCCCGGATGGCGGCGGCGGCGGCTTCTATGACCCGGCGCGCGTCACCCAGCTATCCTGGCGCCCCAGGTCGGTCTGCCTTTGAGCTCTTTCTTGGTTGGGTACTTGGGTCTGCAGTGCTTGGCTGCGCGCCACCTGTTTGGCGATTTGCGTCTGACAGCGCGAGGCTCCTCCTCTTGCAGGGCGTTCCTGTACAGCGGCTTCCTCTCGCACGACGAGTGCGACCACCTCGTCAATCTGGTGAGTTGCTGCTGCTGTGATTCCCTCTTGGTGATGCGAATGGGAGATTGTTGTGAGTTGCGATCTTGATGCTTTTTGTTTTGGGGAATTTGGGGTTGTGACGTTAGGCGAAGGGGAGGATGGAGAAGTCGATGGTTGCAGACAATGATTCCGGCAAGAGTATCATGAGCCAGGTGCGCACCAGCTCCGGCACCTTCTTATCGAAGCACGAGGTAAGCAAAATGTGCATGTTATGCTGCGCAATACCGCTTCTTCAATTTGTTCCTGTATGCTGTTCGGTGCTGCTAATTATATAGCCATAAATTGATCGTATATTCATATATGCGTGGGAGAAAAGAATTTGTCTCTGTGGTTAGTGCATTGGATTAGCTCGATATTGTGTTCGATCATTAGAGATTTCGCCGGATCTGGCTTTATGGTAATGCAAAAGAGATTGATTTGTTCTTCGATTTTAGTTTCTAGAACCTTAGTGTCTTGACTTTGATACGGTACTCTCAAGAGTCAGCATCGCTAACCTACTCCTTTTTATTTTGACCCATTCAAGGACGACATTGTTTCTGGAATTGAAAAGCGTGTAGCTGCTTGGACATTTCTTCCTGAAGGTAATTTCGCGCGACTTTATCTAGTTTGTCTTTTGGAGTTTGGAGCTAGATTACCATTCTCTGGCTGGTCTCTTTCTTGATCAGAAAACGCCGAGTCAATTCAGATTCTGCATTATGAGCTTGGTCAGAAGTATGATGCCCACTTCGATTATTTCCATGACAAGAACAACCTTAAGCGTGGGGGTCATCGAGTCGCCACTGTGCTTATGTACTTGACCGATGTCAAAAAGGGTGGAGAGACTGTATTTCCAAATGCTGCGGTATGCAATTAGCTTTGACATTACCCCCTTGTAATTTCCCAAGACATCTAGTTTAGAAGTTCTTTGCCATTGCTTGCAGGGAAGGCATTTACAACTCAAGGATGAAACTTGGTCTGATTGTGCAAGATCTGGCCTGGCAGGTAGCCTTCACCCCCTATACATTTCTGAACGAAATGGACAATATGAATTGCCTTTCTGCACAAAGTTAATTAACCTCAGTAGTAGGAACTAACGAGACCAATTTATCTTCATCTCCTCTCTCAGTGAAGCCAAAGAAAGGCGATGCGCTACTGTTCTTCAGTCTCCATGTTAACGCGACAACGGATCCAGCCAGTCTTCATGGAAGCTGTCCGGTGATCGAAGGCGAGAAATGGTCTGCAACGAAATGGATCCATGTCAGATCATTTGATAATCCTCCGGATGTAAGCCTGGATTTGCCGTGTTCCGATGAAAACGAGCGCTGCACGAGATGGGCTGCTGTTGGAGAGTGTTACAGGAACCCAAAATACATGGTTGGCACCAAGGATTCGCTCGGATTCTGCCGCAAGAGCTGCGGGGTTTGCGATGCTTAAACCCTGCACCCGCCAAACTGAAGATCTGAAAATCAAAGTGTCATGTTAGGCTGTTAGCTATTTTCGCCCACTTTACTTACACAGTTACACTACTTGAGAAGTTGAGATGTACATAACAGACAAAGCAAGTTTATTAGTATGTGTTTCTGTGTAGTTTAACCTTGAACGATATTGATTGAAAGTAATTGGAACTTTTTTTCAGGTCTAAAGTGCTACTGAAATTTTTCGCAAAAAAGTTGGGAGTATTTCTTTTAGAGGAAAACTACTTCAATTTGCTCTGGTTTCTGTACGCTGCATTCGCTTCGGATTAAAGGTCACTCGTGGGCCTCACGTTTTACCCCAGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAAGAAACTGTATTCACCTTAGGAACATAAACTCATTCCTATATATGGAACAGGTATGCAGCAGATCACTTGGGAAAGATATTGGATTCAAAATAAAGGTATCACATAGTGATGCTTTGATGATCCTCAAATCCTGGATTGCTTCACAGACTTCTTTTAGTGCAAGGTACTTGATTTCAATGTCTGTATTTTAATCATAGCATTTTGTGATCTGCAATTTTAGAGCGTATCAGTCATGTAAGGAGTACTAATCTAAATATTCCCAGTCCCCATCTATATCATGTATGTACTGCAGTTTAAGAATGGGATATCTTTGTTCTAAACTTGGTAATGCTTTGACCTTCTTTTTTCAGTATGGACCAGATGTGCAAATTCTACACCTTTGTGTCAGAAGGTTTTGCCACTGCAACGATTGACATTAAACGGGAGTTTTTGTCTTGCTCCTCTATATTTACACCATTAAACCGTGCTCGATCTAATGATTTTGTTCCTGGAAAATTCTTGTCCCCAAAAGATCTGTATTGGCATGACCCAACAGGCTGTTCTGAAATAATAACAGAGAAAGTCATTTCAATGAAGAATAAGATTAGTATGTTCCCAAGAAAGATGCTATCTTCAGCCTATCCCAGCCTTTGCGAATTCTTTACTGAGGCATGTGGTGTACCAAAGGTTCCCAAGACATCTGACTATGTTGATATACTTTTAGGGCTGTCGAATGCTGCATTACCTTCAGAAGTAGCCAATCAGGTAAGTTGATTTTGTGCATGAATTACCGAAGATTATATTTTGTAATAGCTCATCAGTATAAAGCTTTTATATATTTGAATGTTGTCTGTAGCTATTTCCAGCTAATTATTGTTTTTACAACAAAACACCATTCTACATGATTTTGTCTTGTAAGGTATCTCCTTTAAATTTCCATCTCTCTTTACACTCTCTATGTAGGTCTTTCATGTGTTTGCGAGGTGGGCTAATGATCTCCATTCTGCAAATGACAATATGAATGATATATTGTTCTTGGAAGGATCTCTTCAAAAGTTGGAGACAACAATACTGCCAACCTTGGGTGATAAATGGGTCTCTCTCCATCCTTCTTTTGGCCTTGTTTGCTGGGTAGATGATAATGAGTTGATGCAACACTTTGAGGACTACAATGGTGTTAACTTCATACAATTTGGAGAACTTTCTTATGAAGACAAGCAACTGCTGTATGGAAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTAATTAAAATCCTGTTTTGGGAACGGTCATTGACCTTTTTTATCTACTTTTACCTGGAAGACCATTCATTTTTGTCACTGAGAGAAATTTTAATAATTTCAGTGTTCTTTATTTATGAAAAATATTCTCCAAATTAATCTCTATTAAGAGAACAAATTTTATCATTGAGAGAAAATTTAATAACTTCTGAGTGTTCTTTACTTATGGAAAACATGTTCCAAATTAATCTCTATTAATAGAACAAAAAAAGGGCACAAAATAGAATGATTACTGAACTGGCTGTGGCACCAGTGTGTTTTTCATGCACTTCTCAGATACCTATTTTCTACGATCCACCACTGCTCATCCTGAGTGGGTAGTAGCAAATCGGAGAAACTTCAAGGTGGATGAATCTTGATTATTTTATTTTATGTATTTATTTATTTTGCAAAATATGTTTGGATGATGCTGACTTTACACAGCTTTTCTTTTGCGGGGAACTTTAGCCAGCTGTCAAAATTGACTGCCTTTGATGAGACGCTCAGTTCAGTTGATAGCAGCTGAAAATATGCGTTCTGTCTGAATGCTGCACATGCTTTGATATTTAATTCTTACACATCTTTTACTGATTATGTAAATAAATAAATGCATATTTAACAATTGCATATATACATCAAATTGCTCAAGCATACGAGTAGGAACTTACATATTGAATATTCTTAGCAGCAACTATTGTCCATTTTCTGTATGTTTCTCATCCAGGATTGTTGCCCTTCTCATAGGTTATTTATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCAACCAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCTATTGCAGGTTAGTATCTACCTTTCTATTAACTACCTGCTCTTCATTTGTTTCTTATTCTTATAAGAAAGAGAACTTCTGGAGAAGCCCTTTTTGCTAGAATTCCACCCACAAACAATTGTATTTCAAGTTCTGATTATTTTGATTTATTTTTTTCCACATGTGGAGGCCTGTAGGGTAGCATTATTTATCGACCTCCTTACCTTCTAAGCTTCATGCCTTTTGAACTTTATGCTATGCAAATGCATGCATAATGTACTCATTACTCAACAGTAAAATTTTACTCTGATAAAGTCAGCTCTGATTTCCCAAATCCATTTGTTATGTTCCTTATTTCCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAATTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAACTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTTTGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATATGGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTCAGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTCGGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAGAATTGGCAAGCAAGGGGAAGCTGCAGCCCACCAACATTTTGTTGATCATTTTGGATCCAATAATGTCAGGTGGGTGAATCAAGAAAATGAAACGGGGTTGCCTTATGACATTGTTGTCACACACAAATCGGGTTTCACAGAATATGTGGAGGTGAAGGCAACAACAAATTCATACAAAAATTGGTTCTACATTACATTGAGGGAATGGCAGTTTGCATTAGAAAAAGGCAATGCCTTTACCATTGCTCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAAGAATCCATACAAACTTTGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCAATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCATTGA</dnaseqindica> 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| External Link(s) |
