Difference between revisions of "BGIOSGA014282"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA014282| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014282, complete gene.| tag = OSJNBA0...")
 
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA014282|
 
GeneName = BGIOSGA014282|

Latest revision as of 15:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA014282

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014282, complete gene.

LocusTag

OSJNBA0043L09.8

Ensembl Transcript ID

BGIOSGA014282-TA

Ensembl Protein ID

BGIOSGA014282-PA

Length

5274

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31212528..31217801

Sequence Coding Region

31216541..31217801,31216045..31216161,31215780..31215961,31215491..31215701,31215140..31215377
,31214890..31215040,31214648..31214808,31212924..31213056,31212528..31212842

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31212528..31217801 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31212528..31217801 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATGCCTCCCCTTTCTCATCTGCTTGCTCCTCATCTCCTTCTGCAAGTGCGATGATCAGCTGACACAAGCAAAGCAGCTCCACCCAGGCGACGTGCTTGGCTCCAAGAGCGGGGTGTTTGCGCTCGGGTTCTTCTCCCCTGGAACCTCCAACAAGAGCTTATATCTTGGCATATGGTACCACAACATCCCGCAGCGCACATATGTTTGGGTTGCCAACCGAGACAACCCGATCTCCACACCTTCATCATCCGTGATGCTCGCCATCAGCAATAGCTCTAACCTTGTCTTGTCAGATTCCGAAGGCCGAACTCTTTGGACAACGAACATCACCATAACTGGAGGCGACGGTGCTTATGCAGCGTTACTTGACACAGGAAACTTGGTTCTCCAGCTGCCAAACGAAACAATCATATGGCAAAGCTTTAATCACCCAACTGACACCATTCTGCCCAACATGAAGTTTTTGCTGAGGTACAAGGCACAAGTCAGCAGGCGACTTGTCGCTTGGAAGGGCCCAAATGATCCATCCACCGGGGAATTCTCCTTGAGTGGCGACCCCAGCTTAGACATTCAGGCCTTCATCTGGCATGGGACCAAGCCATATTACCGCTTCGTCGTGATTGGTCGTGTGTCAGTGTCCGGCGAAGCATACGGCAGCAACAACACCTCTTTCATATATCAAACTCTGGTGAACACACAGGATGAATTCTATGTTAGGTACACAACCTCTGATGGCTCAGCAAATGCACGCATCATGCTTGATTACATGGGAACCTTCAGGTTCCTGAGTTGGGATGATAGCTCGTCATCATGGACAGTTCGCTTACAACGCCCAGCGAGCACCATCGACTGCTATACCTACGCCTCATGTGGCCCATTCGGCTACTGTGATGCCATGCTAGCCATCCCAAGGTGCCAATGCCTCGATGGGTTCGAGCCTGACACCACCAACTCTTCGAGAGGATGCCGAAGAAAGCAACAGTTGAGATGCGGAGATGGGAATCATTTTGTGACCATGTCCGGAATGAAGGTCCCTGACAAGTTCATTCCTGTCCCAAACAGAAGCTTTGATGAGTGCACGGCTGAGTGCAACCGCAACTGCTCGTGCACGGTTTATGCTTATGCAAACTTGACCATAGCCGGCACCACGGCAGACCAATCAAGGTGCTTGCTTTGGACTGGGGAGCTAGTCGACACGGGGAGGACTGGTTTAGGTGATGGTCAGAACCTGTACCTCCGGTTGGCCTACTCTCCTGGGTACACTTCTGAAGCCAACAAAAAGAACAAAAAAGTAGTGAAGGTTGTAGTCCCAATTATAGCATGCCTGCTGACATTCACATCCATATACCTTGTCAGGAAGTGGCAAACAAAAGGCAAACAGAGAAATGACGAAAATAAGAAGAGAACAGTGTTAGGAAACTTTACAACTTCTCACGAACTTTTTGAGCAGAATGTAGAATTTCCAAATATTAATTTTGAAGAGGTTGCTACTGCAACAAACAATTTCAGTGATTCCAACATGCTTGGCAAAGGAGGTTTTGGTAAGGTTTATAAGGGGAAGTTGGAAGGAGGCAAAGAAGTTGCTGTCAAAAGACTCGGTACAGGTTCCACACAGGGGGTAGAGCATTTTACAAATGAAGTGGTTCTTATTGCCAAATTGCAGCACAAAAATCTAGTCAGGCTTCTTGGTTGCTGCATTCATGGAGAAGAAAAGCTTCTTATTTATGAATACTTACCAAACAGAAGCCTGGATTACTTCCTTTTTGATGATTCAAAAAAGTCTATGCTTGATTGGCGAACACGGTTCAACATAATCAAAGGAGTAGCTAGAGGACTTGTTTATCTCCACCAAGACTCAAGGATGACAATAATTCACAGAGATCTCAAAGCCAGCAACATTTTATTGGATGAGGAGATGAGCCCCAAAATATCAGATTTTGGTATGGCGAGAATCTTTGGTAGCAACCAGCATCAAGCAAACACTAAGCATGTAGTCGGGACATATGGTTACATGTCACCTGAATATGCGATGGAAGGCATCTTCTCTGTCAAGTCTGACACCTACAGCTTTGGTGTTTTAGTCTTGGAGCTTATAAGTGGCTCTAAGATCAGCTCACCTCATCTGACAATGGATTTTCCAAACCTTATAGCCCGTGCCTGGAGCTTGTGGAAAGATGGAAATGCAGAGGATTTTGTGGACTCAATTATTCTGGAAAGCTATCCAATTAGCGAGTTTTTGCTCTGTATCCACTTAGGACTGTTATGTGTCCAGGAAGACCCAAGTGCTAGACCATTCATGTCATCAGTTGTGGCCATGGGATACGCATCTCCGGAGTACGCATGGCGAGGGGAGATGACACTAAAGTGCGATGTCTACAGCTTTGGAGTCGTTCTTCTCGAAACCCTTAGCGGACAGAGGAATGGTCCCATGTACAGTCTCCTTCCACATGCATGGGAGCTGTGGGAGCAGGGCAGGGTGATGTCCCTCCTTGACGCGACGATCGGTCTCCCTCTCTCAGTCTCAGGGCCTGATCACACCGAGATGGAAGATGAACTGGCGAGGTGCGTGCAGATCGGGCTCCTGTGCGTGCAGGATGCGCCGGAGGAAAGGCCGGCCATGTCGGCGGTCGTCGCGATGCTGACCAGCAAGAGCTCACGGGTGGATCGTCCCAAGAGGCCAGGGGTTCACGGCGGCAGAAGCAGGCCACCGTTGCGCGAGTCGGAGCTGCTGGGCGCCACCGACATTGACGACGATCTCACGTAG</cdnaseq>

Protein Sequence

<aaseq>MACLPFLICLLLISFCKCDDQLTQAKQLHPGDVLGSKSGVFALGFFSPGTSNKSLYLGIWYHNIPQRTYVWVANRDNPISTPSSSVMLAISNSSNLVLSDSEGRTLWTTNITITGGDGAYAALLDTGNLVLQLPNETIIWQSFNHPTDTILPNMKFLLRYKAQVSRRLVAWKGPNDPSTGEFSLSGDPSLDIQAFIWHGTKPYYRFVVIGRVSVSGEAYGSNNTSFIYQTLVNTQDEFYVRYTTSDGSANARIMLDYMGTFRFLSWDDSSSSWTVRLQRPASTIDCYTYASCGPFGYCDAMLAIPRCQCLDGFEPDTTNSSRGCRRKQQLRCGDGNHFVTMSGMKVPDKFIPVPNRSFDECTAECNRNCSCTVYAYANLTIAGTTADQSRCLLWTGELVDTGRTGLGDGQNLYLRLAYSPGYTSEANKKNKKVVKVVVPIIACLLTFTSIYLVRKWQTKGKQRNDENKKRTVLGNFTTSHELFEQNVEFPNINFEEVATATNNFSDSNMLGKGGFGKVYKGKLEGGKEVAVKRLGTGSTQGVEHFTNEVVLIAKLQHKNLVRLLGCCIHGEEKLLIYEYLPNRSLDYFLFDDSKKSMLDWRTRFNIIKGVARGLVYLHQDSRMTIIHRDLKASNILLDEEMSPKISDFGMARIFGSNQHQANTKHVVGTYGYMSPEYAMEGIFSVKSDTYSFGVLVLELISGSKISSPHLTMDFPNLIARAWSLWKDGNAEDFVDSIILESYPISEFLLCIHLGLLCVQEDPSARPFMSSVVAMGYASPEYAWRGEMTLKCDVYSFGVVLLETLSGQRNGPMYSLLPHAWELWEQGRVMSLLDATIGLPLSVSGPDHTEMEDELARCVQIGLLCVQDAPEERPAMSAVVAMLTSKSSRVDRPKRPGVHGGRSRPPLRESELLGATDIDDDLT</aaseq>

Gene Sequence

<dnaseqindica>1..1261#1641..1757#1841..2022#2101..2311#2425..2662#2762..2912#2994..3154#4746..4878#4960..5274#ATGGCATGCCTCCCCTTTCTCATCTGCTTGCTCCTCATCTCCTTCTGCAAGTGCGATGATCAGCTGACACAAGCAAAGCAGCTCCACCCAGGCGACGTGCTTGGCTCCAAGAGCGGGGTGTTTGCGCTCGGGTTCTTCTCCCCTGGAACCTCCAACAAGAGCTTATATCTTGGCATATGGTACCACAACATCCCGCAGCGCACATATGTTTGGGTTGCCAACCGAGACAACCCGATCTCCACACCTTCATCATCCGTGATGCTCGCCATCAGCAATAGCTCTAACCTTGTCTTGTCAGATTCCGAAGGCCGAACTCTTTGGACAACGAACATCACCATAACTGGAGGCGACGGTGCTTATGCAGCGTTACTTGACACAGGAAACTTGGTTCTCCAGCTGCCAAACGAAACAATCATATGGCAAAGCTTTAATCACCCAACTGACACCATTCTGCCCAACATGAAGTTTTTGCTGAGGTACAAGGCACAAGTCAGCAGGCGACTTGTCGCTTGGAAGGGCCCAAATGATCCATCCACCGGGGAATTCTCCTTGAGTGGCGACCCCAGCTTAGACATTCAGGCCTTCATCTGGCATGGGACCAAGCCATATTACCGCTTCGTCGTGATTGGTCGTGTGTCAGTGTCCGGCGAAGCATACGGCAGCAACAACACCTCTTTCATATATCAAACTCTGGTGAACACACAGGATGAATTCTATGTTAGGTACACAACCTCTGATGGCTCAGCAAATGCACGCATCATGCTTGATTACATGGGAACCTTCAGGTTCCTGAGTTGGGATGATAGCTCGTCATCATGGACAGTTCGCTTACAACGCCCAGCGAGCACCATCGACTGCTATACCTACGCCTCATGTGGCCCATTCGGCTACTGTGATGCCATGCTAGCCATCCCAAGGTGCCAATGCCTCGATGGGTTCGAGCCTGACACCACCAACTCTTCGAGAGGATGCCGAAGAAAGCAACAGTTGAGATGCGGAGATGGGAATCATTTTGTGACCATGTCCGGAATGAAGGTCCCTGACAAGTTCATTCCTGTCCCAAACAGAAGCTTTGATGAGTGCACGGCTGAGTGCAACCGCAACTGCTCGTGCACGGTTTATGCTTATGCAAACTTGACCATAGCCGGCACCACGGCAGACCAATCAAGGTGCTTGCTTTGGACTGGGGAGCTAGTCGACACGGGGAGGACTGGTTTAGGTGATGGTCAGAACCTGTACCTCCGGTTGGCCTACTCTCCTGGTATGCCCACCTTTTTTCCCCTGCAGTTGCAATATAACTCTTAGGGCATCCACAATGTACTACAAAAGTAGTCCATAGGGAATAAACTATTCCATTCAGTCATCTATTAACATTGTGCAACTAGTCTATATAAAGAAAATAGCAAAAGGTATCCATATGCATATGGACTACCCATATGACATAAATAATATTATCTATCTCTACTTCTCTCTCTTCTCCTAATGTCACATTGTATCCATATACATTGTGAGGATTGCTATAGGTAAAGTTTATTTATGTGGATCCCATCTATATAGACCACTTTTGCCATATACATTGATGATGCCCTTAGATAGCCTGTACATAGAATTCTGAGAAAAAAAATCACTTTTCTTGATAGGGTACACTTCTGAAGCCAACAAAAAGAACAAAAAAGTAGTGAAGGTTGTAGTCCCAATTATAGCATGCCTGCTGACATTCACATCCATATACCTTGTCAGGAAGTGGCAAACAAAAGGTACAGTGAGGGTCAATACTCAATACTAACTAACACTATGCAGTCTTCCTGTAACTACTGACCGATAATGATGTTCTTATTAGGCAAACAGAGAAATGACGAAAATAAGAAGAGAACAGTGTTAGGAAACTTTACAACTTCTCACGAACTTTTTGAGCAGAATGTAGAATTTCCAAATATTAATTTTGAAGAGGTTGCTACTGCAACAAACAATTTCAGTGATTCCAACATGCTTGGCAAAGGAGGTTTTGGTAAGGTTTATAAGGTAAAAATTTACACTAAGAGTTGTAGCAGTGGACAAGCCTTATAATTTTTATCCTGTTAAAATAATTTTACTATACAGGGGAAGTTGGAAGGAGGCAAAGAAGTTGCTGTCAAAAGACTCGGTACAGGTTCCACACAGGGGGTAGAGCATTTTACAAATGAAGTGGTTCTTATTGCCAAATTGCAGCACAAAAATCTAGTCAGGCTTCTTGGTTGCTGCATTCATGGAGAAGAAAAGCTTCTTATTTATGAATACTTACCAAACAGAAGCCTGGATTACTTCCTTTTTGGTATGTAATAATTATATATTCTCTTTTTACCTTTTTCACTTTTGGTGGGAGAGGCCGAGAGGGTTCCCAAAGCCTGAACAACAATAAGTTTCCTTTCATAATGTCCGTCGTAGATGATTCAAAAAAGTCTATGCTTGATTGGCGAACACGGTTCAACATAATCAAAGGAGTAGCTAGAGGACTTGTTTATCTCCACCAAGACTCAAGGATGACAATAATTCACAGAGATCTCAAAGCCAGCAACATTTTATTGGATGAGGAGATGAGCCCCAAAATATCAGATTTTGGTATGGCGAGAATCTTTGGTAGCAACCAGCATCAAGCAAACACTAAGCATGTAGTCGGGACATAGTGAGTAACTCTTCAACTACCTGTGTATAAAATACAAACTTCTATATACTTGAACGCATTCAAACTACTTACACTCAGTTGGTGACATGATTTAAACAGTGGTTACATGTCACCTGAATATGCGATGGAAGGCATCTTCTCTGTCAAGTCTGACACCTACAGCTTTGGTGTTTTAGTCTTGGAGCTTATAAGTGGCTCTAAGATCAGCTCACCTCATCTGACAATGGATTTTCCAAACCTTATAGCCCGTGTAAGTTGTATGACATATAGTGCACAAAGTTTCAACAGCTAAAGTTTTGCACTAATTAGAAACTCTCTTCTCTTTGTTCAGGCCTGGAGCTTGTGGAAAGATGGAAATGCAGAGGATTTTGTGGACTCAATTATTCTGGAAAGCTATCCAATTAGCGAGTTTTTGCTCTGTATCCACTTAGGACTGTTATGTGTCCAGGAAGACCCAAGTGCTAGACCATTCATGTCATCAGTTGTGGCCATGTTAGAGAATGAGACCACAGCACGTCCTACTCCAAAGCAACCTGCATATTTCGTGCCAAGGAATTATATGGCCGAAAGGACGAGACAGACTCCAACAATCTTAAACACCATGAGCTTTACCACACTACAGGGGCGTTAGAAGTTTGGATTCAGAATCAACCTGTTGCAGAATTCATCACTTGATCTGATCATATGATTGTCCCTCTTTAATTTCAGAATGAGCTGGTTATAGAATTAACCGCTACGGAATGAAATTTACAGGAAACAAAATTGTCCCAGTGAAAATGTGATTGCTCTTTGGGTCATTGGGCTTATGAATTATCATTCATATTCAACAGTTTTCGGATATTATGGCCTTGTTTAGTTCTCAAAAACATCTCATCGAATCTTTGAACACATATATGGAGTATTAAATATAGATAAAAAGAAAAATTAATTGCATAGTTTGCATGTAAATCGCGAGACAAATCTTTTGAGCTTAATTAGGTCATGATTAGCCGTAAGTGCTACAGTAACCCACATGTGCTAATGATGGATTAATTAGGCTCAAAAGATTCGTCTCACAGTTTCCAGGCGAGTTATGAAATTAGTTTTTTCATTCGTGTCCGAAAACCACTTCCGACATCTGGTCAAACGTCCGATGTGACACCCAAAAATTTTCATTTCACCAACTAAACACGCCCTATATGTTTTACGAAAAGAAAAAGGTAAAATCCTTTCGTCGTCAAATTTCACTAAATTATTGGAACTGGAAGGTTGGGTACCTGGGTGCATTTTTGCAATTTGCACTAGGCGATAAAAAAACGAAGAATACGAATCCGCATCTATGTGATTCATCACTGTTTTAATCAGTAGTAGTACTAGTACCTGCACTCGAGGGGCGTTGAAATGGCACGCCTGAACCTGAACCTCCTCGGCGAAACCACGTCACGACCGGAGGTTGCGCGTCTGCTTCGGTTCCCCCTCAGCCGCCGCCGGCGGCTGCGCCGCCGCCGCTTGCCCAACAGCGCGTCAGCACTAGCGGTTCCTCTTTTTGCCGGGTCGGCCGAAGGAACCGGCGACCAATTTTATTAAGATTAGGAGGAATAAAATCAAAGTACAAGTAGTTTTCGCTTGCAACGACAGGTGTCGAATTAGACTGTGGCAGGAACCACAGCCCGGCAAACTAAAGAACTGGAACGTCAACACAACAGAAAGAAAACTAAGAACTGCAATTCTCGAAATAGCCTGCTTCTTTCCACACTAAGATCTCTTCTTTGATAGCCTCTGCTAACTGGTTAGGGCTTCTCGATCTTTGGTCGAAAACACGCGCATTTCTTTCCTTCCAAATCTGCCAGCAAATCAGCATACAAGCGCTGTCGAAGTTTGTCCTGTAGCACTTCCGAAAATATGTTCTGGCCTGCAACCACCACTCTGTCAGGCATGTGTTCTCGCTCCCAGGGATGGGGAAGTAAGCGCTAGCTGATCCATTGCCGCATCCACTAGCGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCGTAGTATTACTGTGTCACTGACATGGTCGAGTTACATTTCCATGAAGGGGATACGCATCTCCGGAGTACGCATGGCGAGGGGAGATGACACTAAAGTGCGATGTCTACAGCTTTGGAGTCGTTCTTCTCGAAACCCTTAGCGGACAGAGGAATGGTCCCATGTACAGTCTCCTTCCACATGTAAGCATCACCATATATACACCAAATCACCAAATATACATATACATTTGGATTAATTCACCAAATCGGCTTTGTGTGCAGGCATGGGAGCTGTGGGAGCAGGGCAGGGTGATGTCCCTCCTTGACGCGACGATCGGTCTCCCTCTCTCAGTCTCAGGGCCTGATCACACCGAGATGGAAGATGAACTGGCGAGGTGCGTGCAGATCGGGCTCCTGTGCGTGCAGGATGCGCCGGAGGAAAGGCCGGCCATGTCGGCGGTCGTCGCGATGCTGACCAGCAAGAGCTCACGGGTGGATCGTCCCAAGAGGCCAGGGGTTCACGGCGGCAGAAGCAGGCCACCGTTGCGCGAGTCGGAGCTGCTGGGCGCCACCGACATTGACGACGATCTCACGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014282