Difference between revisions of "BGIOSGA016173"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA016173| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016173, complete gene.| tag = OS04G03...")
 
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA016173|
 
GeneName = BGIOSGA016173|

Latest revision as of 16:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA016173

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016173, complete gene.

LocusTag

OS04G0350000

Ensembl Transcript ID

BGIOSGA016173-TA

Ensembl Protein ID

BGIOSGA016173-PA

Length

3910

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14178620..14182529

Sequence Coding Region

14178620..14178892,14178958..14179190,14181389..14182529

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14178620..14182529 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14178620..14182529 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTTGGACGAGGCGGCGGCCAGGGTCTTGGCCTCGTCTAGCTCGATGGGTTCTCTTATCACAATTGCCAAGCACGGGAGCTTGCCCGGAAGGCTGAACGCTGTACTGGCAATCAAGGAGGCCGTGTCGCGGGACGGAGCGTTCGTGGACCTGGCGGATGACAAGATCGTCGACGCGCTGCTCGTGATCATCAAGGCTCTGATCCGCCTGCAGGCCGCCATGGTCGCCACCTACCACCTGGCAAGCTCCGACGAGCGCGTCGCGGCGAGGAGCGTGTCCGAGAAGGCCCTCGTGGTGCTCGACGCAATGCACGCCTCGGAGAAAGGCCGCGCGAGCGCGCGGGGCCACGCCCTTGCAATGCCGGTCCTCGTGAAGAAGATGTTCCGCGTGTCCGACGTGGCCACCAAGCTCTGCCGCCGCCACCGCTCGCTGGGCTCGGTCAAGGGAGGGGCCGGTGAGACCGCTCGGACGGTGAGAAGAAAGCCGACGGTGGGTACTGGCCGACTGGATAGGTTGGATGATGCTATGGAAAAATTCAAACACATGATTGATATTGGTGTACCACTGGACACAGCTGTTTACGGTTGTCTGATTCAGGGTCAATGTAATCGTGGTGATTTGGTGAAAGCCAAGGAATTGATTTCTGATATGTTGAGCAAGGGCATTCCTCCTCCTTGCATCAAGTTCTTCACCTCGATTATAAACAACCTATGTAAGGAAGGAAGGGTAGCGGAAGGGAAAGATATCGTGGACTTGATTATACATACCGGTCAGAGGCCTAATCTTATCACGTTCAATTCACTGGTAGATGGATATTGCTTAGTTGGCAATATGAAGGAAGCTGTTGGATTACTTGATTCTATGGAGTCAGTTGGTGTTGAACCTGACATTTATACATATAACACACTTGTTGATGGTTATTGTAAACATGGAAGGATTGACGACGCGTTGACTCTATTCAGAGATATGTTGCACAAGAGAGTGACACTTACAAGTGTTTCATACAACATCATTCTCCATGGGTTATTTCAAGCTAGGAGGACAGTTGTTGCAAAGGAAATGTTCCATGAGATGATTGAAAGTGGAATGGCTGTGAGCATTCACACATATGCTACTGTTCTTGGAGGACTTTGTAGAAATAACTGCACCGATGAAGCTAACATGCTGTTGGAGAAATTGTTTTCTATGAATGTTAAGTTTGATATCCTTACTTTCAATATTGTGATTAGAGCAATGTTCAAAGTTGGCAGAATGCAAGAAGCTAAGGAATTGTTTGCTGCTATCTCTACCTATGGGTTGGTGCCTACTATACTTACCTATAGGGTGATGATAACAAATCTTATAAAAGAGGAATCATTCGAAGATGCTGACAATCTCTTTTCATCAATGGAGAAGAGTGGCTGTACTCCTGACTCTTGCATATTAAATGAGATCATTAGAATGTTACTCAATAAAGGTGAGATTGCCAAGGCTGGACATTATTTGTCTAAAATTGATAAGAAGGGTATCTTGCCTGAAGCTACAACCACTTCCTTGTTAATTTATCTATTTTCAGTGAATGGGAAATATCGAGAATACATAAAATTGCTCCCTGAAAAGTATCGTTTTCTAAGGGAGCAAACTGCAGTTGATAATTGTATCTGA</cdnaseq>

Protein Sequence

<aaseq>MPLDEAAARVLASSSSMGSLITIAKHGSLPGRLNAVLAIKEAVSRDGAFVDLADDKIVDALLVIIKALIRLQAAMVATYHLASSDERVAARSVSEKALVVLDAMHASEKGRASARGHALAMPVLVKKMFRVSDVATKLCRRHRSLGSVKGGAGETARTVRRKPTVGTGRLDRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLREQTAVDNCI</aaseq>

Gene Sequence

<dnaseqindica>1..273#339..571#2770..3910#ATGCCGTTGGACGAGGCGGCGGCCAGGGTCTTGGCCTCGTCTAGCTCGATGGGTTCTCTTATCACAATTGCCAAGCACGGGAGCTTGCCCGGAAGGCTGAACGCTGTACTGGCAATCAAGGAGGCCGTGTCGCGGGACGGAGCGTTCGTGGACCTGGCGGATGACAAGATCGTCGACGCGCTGCTCGTGATCATCAAGGCTCTGATCCGCCTGCAGGCCGCCATGGTCGCCACCTACCACCTGGCAAGCTCCGACGAGCGCGTCGCGGCGAGGGTAGCATACTAGCATCCACGGGGCTCGTCCCAACACTCATCGAGGCCCTCGTAGACGACGACAAGAGCGTGTCCGAGAAGGCCCTCGTGGTGCTCGACGCAATGCACGCCTCGGAGAAAGGCCGCGCGAGCGCGCGGGGCCACGCCCTTGCAATGCCGGTCCTCGTGAAGAAGATGTTCCGCGTGTCCGACGTGGCCACCAAGCTCTGCCGCCGCCACCGCTCGCTGGGCTCGGTCAAGGGAGGGGCCGGTGAGACCGCTCGGACGGTGAGAAGAAAGCCGACGGTGGGTACTGGCCGGTAAGGAGGACAGACGACGACAGCCGGCGGGAGAGAAGCTAGATCGCCCATGCCGTCTCCCAATCCACCCCGACCGGTGCGTGGAGCGGCGACGACCAGCGGCGATGTGGAGGAGGGCGTCGGCGTCAGTGGCGGCGGCAGAGGAGGGATGGGGATCCGGCCAAGGTCGTCGACACCCTAGATCTGAGGGCGCTGCACCACCTAGGTGTGGATGCTGGTGCTCCTGTTCTTCTTCACCGGCAAGGGCGCCATGGCGCAGCTCAACATCGAGACCGGCGTCCCCATCAGTTAAATCGAGCCACTCATCCTCTTCAATGTGCCCACCGCCTTCGCCACGCCAGTCGCCAGCTCCACCGAGCGACGAGAGCGAGCGAGAGGCCATGGCCGCCGCCGTCGCCACCGCGGCCGCAGAGCTCACCGTGTCCAAGTCATCGGCCCTCGGCCCTCCTCTCCGCCGCGCTACTACCTCGCCAGCCGCCGCCCGCGCCGGCCTTCCCCTTCGCCGCGCCGCCCGCGCCACCGTGCGTCGCCACCTCACCCCGACGACAACGCACGGCCACGACAATGGCGCGTCTCCCCATCTGTCGCCGGCTGCGTCGAGAAGAGAGAAGAGAAGAAATAAAAGAAAAGAGAAAAAATAGAAGAAATAAGACGAGGATGATGACGTGGCGTCCTGACACGTGGGGCTGGATCCCACGCTGACTCAGCCGCCACGTCGGACAAAACCGGTGTCAAAACCAGCTAGAGACCTAAAGCGAACGGTTCTGTAAGTTGAAGAATGTTATATATCTGGTATTGCGGTTGGGGATGATTTTGTAACTCGACGACAAGTTGAGGGATCTTCGGTGTACTTTTTCCAAAGGAAAGCACCAACACATATAGGCCGCTATTGTCCATGTGGCCCATGAGGTCCTCTCGAACCCAGCCGTCGAACGAGCTTGTGCGCCTTGGCTTCTAACGCCGCCGGCTGGCCGGCCGGCGGCGGCGGCGGCGGCGGAGGAGAAGCCCTGGCGGTTGACGACGGCGCCGCGCAGATCCACGTCGGTCATGTCGCAGACAACCGCACCCATGTCCCTCCTCCGTCTCTCCTCCATCCTCGCCAGCACCGCCACCGCCGCCGCCTCCTCCACGGCGGCGTCGACCACCACCGCGGCGACGGCATCGCCGGCACGCCCATCCCCTCCCGCCCACGCCGCGTTCCGGGAGCGCCTGCGGTCGGGAACGCTCGGTCCCGACGACGCGCGCCACCTGTTCGACGAATTGCTGCTTCGCCGCGACGCCCCCGCCCCCGCGCGAGGCCTCAACGAGCTCCTCTCCGCGCTCGCCCGCGCGCCGCCCTCCGCCGCCTGCAGGGACGTCCCAGCCCTCGCCGTCGAGCTGTTCAAACGGATGGACCGATGCGCCTGCCCCGAGGCCGCTCCCACCATCTACACCTACAACATCCTCATCAACTGCTACCGCCGCGCGCGCCGCCCCGACCTAGGGCTCCCCGTCTTCGGCCGCTTGCTCAGGACGGGCCTGGGGCCGGATGTGTTCTCGTACAACGCGCTGATCGACGGATTCTCTAAGGAAGGCGAGGTGGACAAAGCTCACGACCTGTTCTACAAGATGGAAGAACAGGGCATCATGCCAAATGTGGTGACTTACAGCTCGCTAATCAATGGGCTGTGCAAGACGAAAGAAATGGACAAGGCTGAGAGGGTTCTACGACAGATGGTCGGCGCTGGTATTCGGCCTAATAATATGACTTACAACTGCTTGATCCATGGATACTCCACTTCAGGAATGTGGAAGGAGTTTGTCAGAGTGTTCAAAGAGATGTCAAGCTCCCGTCTCGTACCGGATGTCAGCAATTGTAACTCCTTCATGACTGCTCTTTGCAAGCATGGCAGAATCAAAGAAGCAAGAGATATTTTTGATTCGATGGTTCTGAAGGGCCCCAAACCTGATGTTATCTCCTATGGTGCTCTGCTTCATGGCTATGCTACTGCGGGATGCATAGCTGGAATGGATAATCTCTTTAATGTGATGGTATGTGAAGGCGTCGTACCTGACCGTCATGTTTTCAACACACTGATTAATGCATATGCTAGATTGGGGATGATGGATAAGTCCCTGCTTATATTTGAAGATATGAAGAAGCAAGGCGTGAACCCTGATATAATCACATTTTCAACTGTGATATCCGCTTTTTGCAGACTGGATAGGTTGGATGATGCTATGGAAAAATTCAAACACATGATTGATATTGGTGTACCACTGGACACAGCTGTTTACGGTTGTCTGATTCAGGGTCAATGTAATCGTGGTGATTTGGTGAAAGCCAAGGAATTGATTTCTGATATGTTGAGCAAGGGCATTCCTCCTCCTTGCATCAAGTTCTTCACCTCGATTATAAACAACCTATGTAAGGAAGGAAGGGTAGCGGAAGGGAAAGATATCGTGGACTTGATTATACATACCGGTCAGAGGCCTAATCTTATCACGTTCAATTCACTGGTAGATGGATATTGCTTAGTTGGCAATATGAAGGAAGCTGTTGGATTACTTGATTCTATGGAGTCAGTTGGTGTTGAACCTGACATTTATACATATAACACACTTGTTGATGGTTATTGTAAACATGGAAGGATTGACGACGCGTTGACTCTATTCAGAGATATGTTGCACAAGAGAGTGACACTTACAAGTGTTTCATACAACATCATTCTCCATGGGTTATTTCAAGCTAGGAGGACAGTTGTTGCAAAGGAAATGTTCCATGAGATGATTGAAAGTGGAATGGCTGTGAGCATTCACACATATGCTACTGTTCTTGGAGGACTTTGTAGAAATAACTGCACCGATGAAGCTAACATGCTGTTGGAGAAATTGTTTTCTATGAATGTTAAGTTTGATATCCTTACTTTCAATATTGTGATTAGAGCAATGTTCAAAGTTGGCAGAATGCAAGAAGCTAAGGAATTGTTTGCTGCTATCTCTACCTATGGGTTGGTGCCTACTATACTTACCTATAGGGTGATGATAACAAATCTTATAAAAGAGGAATCATTCGAAGATGCTGACAATCTCTTTTCATCAATGGAGAAGAGTGGCTGTACTCCTGACTCTTGCATATTAAATGAGATCATTAGAATGTTACTCAATAAAGGTGAGATTGCCAAGGCTGGACATTATTTGTCTAAAATTGATAAGAAGGGTATCTTGCCTGAAGCTACAACCACTTCCTTGTTAATTTATCTATTTTCAGTGAATGGGAAATATCGAGAATACATAAAATTGCTCCCTGAAAAGTATCGTTTTCTAAGGGAGCAAACTGCAGTTGATAATTGTATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016173