Difference between revisions of "BGIOSGA016440"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA016440|
Description = BGIOSGA016440|
Definition = Oryza sativa Indica Group BGIOSGA016440, complete gene.|
tag = |
tid = BGIOSGA016440-TA|...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA016440| | GeneName = BGIOSGA016440| | ||
Latest revision as of 16:08, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA016440 |
|---|---|
| Description |
BGIOSGA016440 |
| Definition |
Oryza sativa Indica Group BGIOSGA016440, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA016440-TA |
| Ensembl Protein ID |
BGIOSGA016440-PA |
| Length |
4973 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:19320925..19325897 |
| Sequence Coding Region |
19320925..19320976,19321991..19325012,19325843..19325897 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome04:19320925..19325897 source=RiceIndica04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome04:19320925..19325897 source=RiceIndica04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGGCCTCGGCGGTGATATTAGCGGCAGGAGGCAGCGCTGTGCAGCGGGTGCTTCGATCGGTAGCACAAGTGCTTCGGTCAGAGAAAGCTAGTCCAGAACTAAGCTTCGACAGGATAATTTACATAGATTGCTCATGCTGGAAAAGTAGAAGGGCAATGCAGAGAAAGATTGCAGAGGAACTAAAACTTGACAGTGAAACAATGGCCCTATTTGATAAGCAGGATGAGGAGGATGACTTCAGTGGACTGGACCAAGGCTCTAGGGATGTGATAATAAGTGTTGCAATAGCCATTTATGAAACCTTGATGGGATCTAGATTCATGATCATCTTTCTTAATGGAAGTGATGAAGAGATGGATGGCACAAGCTTTGGCATTCCATTCTTCACAAAATATGGCAACAATATGATGATATGGACATTCAGGAGAAGGTTCCTCACTGTGAATAGAGAATACTCAGATAGAGCGGACAAACTACGACACACCCACCTTTTCTTTAGATTCTACATATTCTACAGTGGAGGCAACGAATTATCAAGTTCAGAGTTTTGTGCACTGCTGCGCGAGGAGGCTGATACCATAATTTCTCATCATCCATCCATGACAGGCTTTGACACAGCAATAGCCACGAACTGTTGCCTGTATGAGTTATTTCTGCGATATAATTTCCACAAAGCTACTAAATTTGGTTGGGTTTCTCTTGCTGTCAACTACTGGTTATGTGATGGAATTATACAAGAGAACATAGCAAAAAGTATTAGCAGTGCACTACAGCAAGAGATAAGATGGGACTGTGATGATTCTTCCCTTGACACTGCCCTTAAAGAGTTCATGAAAGAGCCCCCCTTTATGGTTGTTAAAGATGACAATGTATATGGAGCTGGGCAATATCACTGGATTTCAATCACATCCAAAGATACAGAAGTTAGCAGCATGCAGTCTATACCTGCAGTGACATCCTCCTTCTTCCTGACATTTGAAACAGCGGATGATTCAAAACCAAAAGCTTTACCAGCCAGCATTTTTAGACATTCCAGCAACCTTAGAGTGCTAGTTCTCTGCTATTGTGGCTTTGATTTTGCATCTCCTCCTTTCCTCATATGCCATGGCCTAAAATTCCTTGGATTGGACCATTGTACTAATGATAGTACATGCGAAAGGGATCAACATGTGGATTGGACAGCTTTATCTAGTCTATATGTGCTGGATCTACGTTACACAGAGTGGGATGAGATCACTTCTCAAGAAAAAATAGCACTCATGTATAACCTTCAAGAGCTAAACATAGTGGGATTCAGATGCTGGCAACACTATGCAAGGAGACTACAAGGACAGCTACCTTGCCTCCGTAGGCTCCGAGTGGTCAAACCTACGGATCAGGCAGATATATCAACAGACATTGCCAACTCCTTTGTGGAGAAGACACAACTAGAAATACTTGATCTCTCTGGGGACACTAGCATGGAAACTATTCCCAACAGCATGTCAAATGTGGATAGCCTATTGGTGCTTATTGTAGATGGTTGTGATAGGTTGAAAAATGTTATTGTGTCTGATGGTGTTTTTCCTTCACTCACATCCTTCAGTTTTGATGGCTACGGACCAACATACCATTGGGCATCAACAGTTGAGTTGCCTCCAAAAGAAATGCGTCCTTTTGTAGATAACAAGAGAGATATAAAAACTTGTAAGATCTCTTTAAAAGGCTGCGCACGATTGGAGAACCTATTCTTAAGGCAGCTACCCAACCTAGTGGAGCTAGACCTCTCTGGAACTGCAATAAAGATACTTGATTTTACAAGTATGGTGGTGGAAGTCTCATGTCTCAAGCGACTATTTCTGCTAGGATGCAAGCAACTCCAAGCAATAAAATGGGACAATAGTGGTTCAACGATAAAGCCGGACCTAGAGTTGTTGTGCGTTGACACAAGACCTAGAATTAAATATCCTCAGTTATTTGTTGACAAGAATAAATCCCCCGGTCGCTTGTCAGTCCATGCTGTTATTGTGGACGCGAGAATTGCTCGGTCCTTACACGCTCTAATAGAAAAGACCTCATATCATGTTGATATGCATATCCATGTCACCTCTTCGACGGTATATAGTGAAGTTCAATCCGAAGGAACCTACAAAGATAGCATTAGCCAATTAAGTGATCATGTGAACATGCAGCAACAAGACCTTATTTCAGCAGGCCAGTACCATGATGTCCAACTTAGCATGGTTGGCGATGTCCCAATGCAGTCATTCCCCCTTCCTCCGACAACAATGTTGAGCCGCCATATCGAGATTGCACAGGGGAGCCACAACCTGGAGAGCGAGCTGGATGTTGATTCACCGATTCGTACTTTAGCTTTTCTAGCAATTTGGAAGGCTGAGTCACTGCATGTGCATGATCTCTCAACCATCACTCCTTTGCCCGGAGGACGATGGTGGTATCTCAAGTGGTGTCGTATAGAGAGGTGCCCGAAGATAGAAATTGTCTTCCCTAAAGACGTATGGGATTTCGACAATCTGGAAACCGCCTGGGTGTCGGATCTCTTGATGGCCCGTTGCATCTGGAGTAAAGGTTCTCGCGACAACCCTTGTTCCTTCGAAAATCTGCAGCACCTGCACCTGCGCAGCTGCCCAAGGCTCCATTTCGTGCTCCCGGTGTGGGTCTCCTCCTTCCCGGACCTGAAAACCCTCCACGTCATCCACTGCAGCAACCTCCACAACATCTTCGTGCTGGACGAATTTTACCCAAAGCAAATAACCGTCAAAGGTGTAGCATTCCCGAAGCTAACCACCATCCACCTGCACGACCTCCCGATGCTGCGGCAGATCTGCGACGTCGAGTTCAAGATGGTGGCTCCCGCGCTCGAGACCATCAAGATCAGGGGATGCTGGGGCCTGCGCCGGCTGCCGGCCGTCGCTGCGGATGGACCGAAGCCGGCCGTGGAGATCGAGAAGGACGTGTGGGACGCGCTGGAGTGGGACGGGGTGGAAGCCGACCACCACCCTTCCCTCTTCCAGGCGCCGGTGCACTCGCGCTACTACAGGAAGAAGCTGCCCAGGGGCTCCGTCCTCAGTGGAGATTTCATANCGCAAATGAAAGCATCCTGCTTCTGCACTAAAGTGCACTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MAASAVILAAGGSAVQRVLRSVAQVLRSEKASPELSFDRIIYIDCSCWKSRRAMQRKIAEELKLDSETMALFDKQDEEDDFSGLDQGSRDVIISVAIAIYETLMGSRFMIIFLNGSDEEMDGTSFGIPFFTKYGNNMMIWTFRRRFLTVNREYSDRADKLRHTHLFFRFYIFYSGGNELSSSEFCALLREEADTIISHHPSMTGFDTAIATNCCLYELFLRYNFHKATKFGWVSLAVNYWLCDGIIQENIAKSISSALQQEIRWDCDDSSLDTALKEFMKEPPFMVVKDDNVYGAGQYHWISITSKDTEVSSMQSIPAVTSSFFLTFETADDSKPKALPASIFRHSSNLRVLVLCYCGFDFASPPFLICHGLKFLGLDHCTNDSTCERDQHVDWTALSSLYVLDLRYTEWDEITSQEKIALMYNLQELNIVGFRCWQHYARRLQGQLPCLRRLRVVKPTDQADISTDIANSFVEKTQLEILDLSGDTSMETIPNSMSNVDSLLVLIVDGCDRLKNVIVSDGVFPSLTSFSFDGYGPTYHWASTVELPPKEMRPFVDNKRDIKTCKISLKGCARLENLFLRQLPNLVELDLSGTAIKILDFTSMVVEVSCLKRLFLLGCKQLQAIKWDNSGSTIKPDLELLCVDTRPRIKYPQLFVDKNKSPGRLSVHAVIVDARIARSLHALIEKTSYHVDMHIHVTSSTVYSEVQSEGTYKDSISQLSDHVNMQQQDLISAGQYHDVQLSMVGDVPMQSFPLPPTTMLSRHIEIAQGSHNLESELDVDSPIRTLAFLAIWKAESLHVHDLSTITPLPGGRWWYLKWCRIERCPKIEIVFPKDVWDFDNLETAWVSDLLMARCIWSKGSRDNPCSFENLQHLHLRSCPRLHFVLPVWVSSFPDLKTLHVIHCSNLHNIFVLDEFYPKQITVKGVAFPKLTTIHLHDLPMLRQICDVEFKMVAPALETIKIRGCWGLRRLPAVAADGPKPAVEIEKDVWDALEWDGVEADHHPSLFQAPVHSRYYRKKLPRGSVLSGDFIXQMKASCFCTKVH</aaseq> |
| Gene Sequence |
<dnaseqindica>1..52#1067..4088#4919..4973#ATGGCGGCCTCGGCGGTGATATTAGCGGCAGGAGGCAGCGCTGTGCAGCGGGGTTAGCGGTGGCACAGTGCGGCCGGATTAGCTACGGGAGGCAGCGCAATGGCAATTGCTAATCGGGACCGCATTTTCTATACATACAAGGAGAAGAGTGAGAGGGAAGAACGATTTGAGGATTTTTTTTTTGGGTGGGATTCTAGTGTCACTATATAGCTAAAAGGAGATATATGCGATGTGTTGTGATGTGGAGGGGGCTGAGAGCAAAAGTATTGTCTACGTGGTCAAACACAGTCAAAGGATGTTTAGACCGGGGTGGTACGTTAAACGAAGTTCACAGACTTAAACGTGTAATTTTCAAATTCACAGATCTAAGTGACACCACCACACAAATTTAGGGACCGGCCATGTATTTTACTCTTTATTTTAAAAAACTAAAAGTCAGCTTAGAGCGTGCCTGCACTACCACCAACTCCTTTCAGTTACTAGTACTAGTAGGACTGCGCAGCCTTGTAGTCTAACGGACCCAAAACTTGTTTTGTTAATTAAAAAAAAAAGATCTTATTTGTACACTACACTTATGTTGCCTCTTCAAGCTAATTTTATCAGTAACCATTTATTACTCGTTCTATCCATTTTTATTTTTTTAAAGCACACATCTCATTAATCCTTCAAAGCCACTTGTAAATTCTAAAATTCATTTGGCCGTAACCAGTAGTTGTTTCATCTGATCCGGAAGATTTCAGATGTTAAACACCAGCCACAGCCAGCACACACTAGTAGCTGGTAGCCTCGCAGATGCACATCGACTAATTTGTTGCTCCATATATATACATGTATACACTAGATCAGGGTATGCATTTCGTATGCTTTACTTTCTTTAATCGATTGATCCAACACCAGAATTAATAAGGTGGCCTCTCACTTTTTTCTTAACTGCTTACTCCACCACAGGGGTTCGGTCATCGAGACGTCGCTGGCGCTAGAGATTTCATACTTCGGTATCTCCGATACAGGGCTGATTATAAAGTCATCTATTTTGATGGCTGGTATGGATTTGGGGCCTCCGCAGTGCTTCGATCGGTAGCACAAGTGCTTCGGTCAGAGAAAGCTAGTCCAGAACTAAGCTTCGACAGGATAATTTACATAGATTGCTCATGCTGGAAAAGTAGAAGGGCAATGCAGAGAAAGATTGCAGAGGAACTAAAACTTGACAGTGAAACAATGGCCCTATTTGATAAGCAGGATGAGGAGGATGACTTCAGTGGACTGGACCAAGGCTCTAGGGATGTGATAATAAGTGTTGCAATAGCCATTTATGAAACCTTGATGGGATCTAGATTCATGATCATCTTTCTTAATGGAAGTGATGAAGAGATGGATGGCACAAGCTTTGGCATTCCATTCTTCACAAAATATGGCAACAATATGATGATATGGACATTCAGGAGAAGGTTCCTCACTGTGAATAGAGAATACTCAGATAGAGCGGACAAACTACGACACACCCACCTTTTCTTTAGATTCTACATATTCTACAGTGGAGGCAACGAATTATCAAGTTCAGAGTTTTGTGCACTGCTGCGCGAGGAGGCTGATACCATAATTTCTCATCATCCATCCATGACAGGCTTTGACACAGCAATAGCCACGAACTGTTGCCTGTATGAGTTATTTCTGCGATATAATTTCCACAAAGCTACTAAATTTGGTTGGGTTTCTCTTGCTGTCAACTACTGGTTATGTGATGGAATTATACAAGAGAACATAGCAAAAAGTATTAGCAGTGCACTACAGCAAGAGATAAGATGGGACTGTGATGATTCTTCCCTTGACACTGCCCTTAAAGAGTTCATGAAAGAGCCCCCCTTTATGGTTGTTAAAGATGACAATGTATATGGAGCTGGGCAATATCACTGGATTTCAATCACATCCAAAGATACAGAAGTTAGCAGCATGCAGTCTATACCTGCAGTGACATCCTCCTTCTTCCTGACATTTGAAACAGCGGATGATTCAAAACCAAAAGCTTTACCAGCCAGCATTTTTAGACATTCCAGCAACCTTAGAGTGCTAGTTCTCTGCTATTGTGGCTTTGATTTTGCATCTCCTCCTTTCCTCATATGCCATGGCCTAAAATTCCTTGGATTGGACCATTGTACTAATGATAGTACATGCGAAAGGGATCAACATGTGGATTGGACAGCTTTATCTAGTCTATATGTGCTGGATCTACGTTACACAGAGTGGGATGAGATCACTTCTCAAGAAAAAATAGCACTCATGTATAACCTTCAAGAGCTAAACATAGTGGGATTCAGATGCTGGCAACACTATGCAAGGAGACTACAAGGACAGCTACCTTGCCTCCGTAGGCTCCGAGTGGTCAAACCTACGGATCAGGCAGATATATCAACAGACATTGCCAACTCCTTTGTGGAGAAGACACAACTAGAAATACTTGATCTCTCTGGGGACACTAGCATGGAAACTATTCCCAACAGCATGTCAAATGTGGATAGCCTATTGGTGCTTATTGTAGATGGTTGTGATAGGTTGAAAAATGTTATTGTGTCTGATGGTGTTTTTCCTTCACTCACATCCTTCAGTTTTGATGGCTACGGACCAACATACCATTGGGCATCAACAGTTGAGTTGCCTCCAAAAGAAATGCGTCCTTTTGTAGATAACAAGAGAGATATAAAAACTTGTAAGATCTCTTTAAAAGGCTGCGCACGATTGGAGAACCTATTCTTAAGGCAGCTACCCAACCTAGTGGAGCTAGACCTCTCTGGAACTGCAATAAAGATACTTGATTTTACAAGTATGGTGGTGGAAGTCTCATGTCTCAAGCGACTATTTCTGCTAGGATGCAAGCAACTCCAAGCAATAAAATGGGACAATAGTGGTTCAACGATAAAGCCGGACCTAGAGTTGTTGTGCGTTGACACAAGACCTAGAATTAAATATCCTCAGTTATTTGTTGACAAGAATAAATCCCCCGGTCGCTTGTCAGTCCATGCTGTTATTGTGGACGCGAGAATTGCTCGGTCCTTACACGCTCTAATAGAAAAGACCTCATATCATGTTGATATGCATATCCATGTCACCTCTTCGACGGTATATAGTGAAGTTCAATCCGAAGGAACCTACAAAGATAGCATTAGCCAATTAAGTGATCATGTGAACATGCAGCAACAAGACCTTATTTCAGCAGGCCAGTACCATGATGTCCAACTTAGCATGGTTGGCGATGTCCCAATGCAGTCATTCCCCCTTCCTCCGACAACAATGTTGAGCCGCCATATCGAGATTGCACAGGGGAGCCACAACCTGGAGAGCGAGCTGGATGTTGATTCACCGATTCGTACTTTAGCTTTTCTAGCAATTTGGAAGGCTGAGTCACTGCATGTGCATGATCTCTCAACCATCACTCCTTTGCCCGGAGGACGATGGTGGTATCTCAAGTGGTGTCGTATAGAGAGGTGCCCGAAGATAGAAATTGTCTTCCCTAAAGACGTATGGGATTTCGACAATCTGGAAACCGCCTGGGTGTCGGATCTCTTGATGGCCCGTTGCATCTGGAGTAAAGGTTCTCGCGACAACCCTTGTTCCTTCGAAAATCTGCAGCACCTGCACCTGCGCAGCTGCCCAAGGCTCCATTTCGTGCTCCCGGTGTGGGTCTCCTCCTTCCCGGACCTGAAAACCCTCCACGTCATCCACTGCAGCAACCTCCACAACATCTTCGTGCTGGACGAATTTTACCCAAAGCAAATAACCGTCAAAGGTGTAGCATTCCCGAAGCTAACCACCATCCACCTGCACGACCTCCCGATGCTGCGGCAGATCTGCGACGTCGAGTTCAAGATGGTGGCTCCCGCGCTCGAGACCATCAAGATCAGGGGATGCTGGGGCCTGCGCCGGCTGCCGGCCGTCGCTGCGGATGGACCGAAGCCGGCCGTGGAGATCGAGAAGGACGTGTGGGACGCGCTGGAGTGGGACGGGGTGGAAGCCGACCACCACCCTTCCCTCTTCCAGGCGCCGGTGCACTCGCGCTACTACAGGAAGAAGCTGCCCAGGGGCTCCGTCCTCAGGTATACATACGGTGCATGCATCGATCCATGTTCCTAGCTAGCTGCTCCATCTTGATTCATTTGCATAATACTTGTTCTCAGTTATTTCATTTGTTTGATCTGTGCTTAATCAATTTGCTTTCTCTGTCTACTGTTATATTTGTTGCCTAGGTGAATTGAATCCCTGGGCTTGGGCGGCCATGATTTGGGGATTGATTGGCGACGAATGATGGTGAATCAGTGAGATGCTTCTTGCTTGCTTCTGTTGGGTGATTTGTCTCCGGTGATGTTGCAGCAAGCTTTGTGGTGTGAGCTGTGTGACGGGCACGGACTGACCGTGGCTCGATCTTGTCCTCGTATATGGCCGAGTTGGCCAGAGAGCGAGATTGCCATGGCTCTGAAATAATAAGCGGGCTTTGTTTGTGCGTGGATGCACAGACCAGCTGATTGAGTGAGTGTGTGTTTCTTGAATTTAATTAGCATTCTGGGTGTGGATGCTCAGATGCATGTGCGTGTGTGGCTTGATATGATGATCTGCTTTGCGTTTGAAACAATAATAAGCAGTAGCCATTTGTGCCTGCGAGCATATGTATGTGGCTGCTGCAGTGTGACTGTGTGAGAGTGCATTGCTTGTGTGTAACTGAATTCTGAAGATTCTGAACAGATGAGCAGCTGCCTGTGTGTGCTTGCTTGCATGCATGCATCCACCTTGCTCCAATGCGTGTATGTGTGGTATTGTAATTATCAGAAGCTATATTTGTTTGATCTACTTTCTCTTCTGTTTCCCAGGGAAAAGAGTTAACCATCTCTTACTCCTTGTGCCAACATTTTCTTTCTTTTTTTTTTGACAGTGGAGATTTCATANCGCAAATGAAAGCATCCTGCTTCTGCACTAAAGTGCACTAA</dnaseqindica> 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| External Link(s) |
