Difference between revisions of "Os07g0680000"

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(Created page with "{{JaponicaGene| GeneName = Os07g0680000| Description = Similar to Vacuolar sorting receptor 1 precursor (AtVSR1) (Epidermal growth factor receptor-like protein 1) (AtELP1) (...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os07g0680000|
 
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Description = Similar to Vacuolar sorting receptor 1 precursor (AtVSR1) (Epidermal growth factor receptor-like protein 1) (AtELP1) (AtELP) (BP80-like protein b) (AtBP80b) (Spot 3 protein)|
 
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Version = NM_001067178.1 GI:115474088 GeneID:4344294|
 
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Length = 10235 bp|
 
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Definition = Oryza sativa Japonica Group Os07g0680000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
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Please input expression information here.
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AP = Chromosome 7:29469695..29479929|
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CDS = 29470068..29470172,29470295..29470401,29470851..29470982,29471149..29471215,29471290..29471372<br>,29471561..29471642,29476838..29476914,29477015..29477098,29477180..29477249<br>,29477362..29477450,29477538..29478224,29479437..29479734|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008400:29469695..29479929
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source=RiceChromosome07
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008400:29469695..29479929
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source=RiceChromosome07
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgacgatgatggggtgtgccgtgctgctcgtggtggtggcgtccatggcgggggaggcggcggggaggttcgtggtggagaagaacagcctgcgggtgacgtcgccggcggggctccggggcgtctacgagtgcgccatcggcaacttcgggatgccgcagtacgggggcaccatgcacggggtcgtcgtctaccccaaggccaacaagaaggcctgcaggtccttcgacgacttcgacctctccttcaagcccaagcccggcggcctccccatcttcctcctcgtcgatcgcggagactgctacttcacaacaaagggatggaatgctcaaaccgctggagctgcagctgttcttgttgccgatgatagattggagcctttgataacaatggactctccagagtctagtggcacagattacatagagaaaattactgttccttcagcacttgtaacgaagaagtttggggacgaccttaagaaagcactggaaaacggtgatatggtcaatgtccttctggattggagggaatctctccctcatcctgatgagcgtgtagagtatgaattctggacaaacagcaacgatgaatgtggtgccaaatgtgacatgcaaatgaattttgtgaggaacttcagaggaacagcacaggttcttgagaaaaggggttacactcagttcacccctcactacattacatggtattgtccggaagcttttgtcctgagcaagcagtgcagatctcagtgtatcaatcatgggagatactgcgctccagatccagagcaggatttcaacattggatatgatggaaaagatgttgtgcttcagaacctgattcagatttgcttgttcaaggttggcaatgaaactcacaaaccatgggtgtggtgggattatgtacacgatttttcaattaggtgcccaatgaaggagaagaaatacacgcgtgaatgcgctaatggtgttatcaagtcacttggattggaccttgagaggatcaacaagtgtgtgggagaccctgaagctgatgaagaaaatcccgtgcttaaagcggaacaagatgctcaaattggtcaaggctctcgaggagatgtcactatattgccgacccttgtcgttaacaacaagcagtacagaggtaagctggagaaaagtgctgtgttaaaagcagtatgctcaggatttgaggagacaactgaacctgatgtttgtttgagtcaagagatccaaacaaatgaatgtttggagagcaatggagggtgctggcaggacaagactaataattttactgcgtgcaaggacaccttccgtgggcgagtttgtgaatgccctattgcccgtggtgtgaagttcgttggtgacgggtacactcactgtgaagcttctggtgtcggtaggtgccaaatcaacaacggaggctgctggaaggaaactaaaaatgggaagacggtttctgcctgctcaaatgaagaatctaaaggctgcaaatgcccaccaggtttcaagggtgatggtataaaaagttgtgaagatattgatgaatgcaaagacaagcttttctgccagtgcaaggactgctcttgtgagaatacatggggaagctatgagtgcagctgtggtggaagtaatatgttatacatgagagagcatgacacttgcatcagcaaagttgcttcttcgtcagtgggctggggcttcctttgggttattttctttggcctcgctttggctggaattggagcatatgccgtatacaaatatcggctacggagttacatggattcagagattcgtgcgatcatggctcagtacatgcccctggagaatcaagaaacaccgaatcaacatcgtcctgtggagcatgctgatatctga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MTMMGCAVLLVVVASMAGEAAGRFVVEKNSLRVTSPAGLRGVYE                    CAIGNFGMPQYGGTMHGVVVYPKANKKACRSFDDFDLSFKPKPGGLPIFLLVDRGDCY                    FTTKGWNAQTAGAAAVLVADDRLEPLITMDSPESSGTDYIEKITVPSALVTKKFGDDL                    KKALENGDMVNVLLDWRESLPHPDERVEYEFWTNSNDECGAKCDMQMNFVRNFRGTAQ                    VLEKRGYTQFTPHYITWYCPEAFVLSKQCRSQCINHGRYCAPDPEQDFNIGYDGKDVV                    LQNLIQICLFKVGNETHKPWVWWDYVHDFSIRCPMKEKKYTRECANGVIKSLGLDLER                    INKCVGDPEADEENPVLKAEQDAQIGQGSRGDVTILPTLVVNNKQYRGKLEKSAVLKA                    VCSGFEETTEPDVCLSQEIQTNECLESNGGCWQDKTNNFTACKDTFRGRVCECPIARG                    VKFVGDGYTHCEASGVGRCQINNGGCWKETKNGKTVSACSNEESKGCKCPPGFKGDGI                    KSCEDIDECKDKLFCQCKDCSCENTWGSYECSCGGSNMLYMREHDTCISKVASSSVGW                    GFLWVIFFGLALAGIGAYAVYKYRLRSYMDSEIRAIMAQYMPLENQETPNQHRPVEHA                    DI</aaseq>|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]]
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DNA = <dnaseqindica>9758..9862#9529..9635#8948..9079#8715..8781#8558..8640#8288..8369#3016..3092#2832..2915#2681..2750#2480..2568#1706..2392#196..493#ggtcaaatccttcgtagggcaggcttcctttattgcactcctgctcccgcgaaagcctcgcctcgccttttctccctaccaagccaccacgccacccaaaccgcgatttctgatcgatcgatcgttagctcgatccaagaacccatcttttctttgatccccaatcctcttttgccgaggattaattgggagaagatgacgatgatggggtgtgccgtgctgctcgtggtggtggcgtccatggcgggggaggcggcggggaggttcgtggtggagaagaacagcctgcgggtgacgtcgccggcggggctccggggcgtctacgagtgcgccatcggcaacttcgggatgccgcagtacgggggcaccatgcacggggtcgtcgtctaccccaaggccaacaagaaggcctgcaggtccttcgacgacttcgacctctccttcaagcccaagcccggcggcctccccatcttcctcctcgtcgatcgcggaggtcctccccctttcttgatttattcgaacccgtttcagtttttatttattattgggggagatttattttccctctcgtgagtgattttaaatatcgcatcttttaatttattttatttattgaatgtggtcctagctaacagtcacttctagttctaggatatgagaaatttaataatgttactcgcattttttttctcattttgtcctaactagcagtttgcacctaatgtttttttttcttttgactgaaagtttgcacctaatgttaataacaacatgttcttgaattgttctactcttaactcctaacccaaacaaaatgatttggaacttggaagtctatgtactctgcagtccatttaaggaaaacgattcattttgtactctgtagccatattctgtcagtgaataagtttggcagaggggtgcactgtcattacaagctgctttagttcttttttattgtctaatggtttatcatggatttttccttaactaggataattcgatacacgctatttgtcatttcatatgcaattttgtcctaattagtagggtacctgatttggtagttggcatatagtgcagttctctatctgcttgtaagttcggtacatggtttgttggaattttgggtaagtagctgggttccatggtcaaatcttgtttagagaaagattgtgcacgcttacgtttagttgttgtgctttttgagtgagtcagggaataaaatcatgtgctttgactgtccaaattatttagcttttgcggctactgctatttcaaaaaggatttattttctttctttgcaatttcaaaggtcttgctctacaacttatgtcactgctttggctacagttttattggtagaaaagctgcacatagaaggcgatttagagctagaaatggacactatacatagaactgtatatatggccatcagtataaatatgtgaaccagcctagtggatttcattctgaatattaggttaaacaggaggtgaaagttctcaactctgcattatttgttggtaattacattttatggaagaagaaatatcagtatctttgtgttccataaaaataatgtagtcatgccatttgtatgtttggctgtaacttcttttctcctgtttcttaggcgtaatgtaactgttaaagcagattttattgttcaaagtggggatctttaattctttgtgatgtgcagactgctacttcacaacaaagggatggaatgctcaaaccgctggagctgcagctgttcttgttgccgatgatagattggagcctttgataacaatggactctccagagtctagtggcacagattacatagagaaaattactgttccttcagcacttgtaacgaagaagtttggggacgaccttaagaaagcactggaaaacggtgatatggtcaatgtccttctggattggagggaatctctccctcatcctgatgagcgtgtagagtatgaattctggacaaacagcaacgatgaatgtggtgccaaatgtgacatgcaaatgaattttgtgaggaacttcagaggaacagcacaggttcttgagaaaaggggttacactcagttcacccctcactacattacatggtattgtccggaagcttttgtcctgagcaagcagtgcagatctcagtgtatcaatcatgggagatactgcgctccagatccagagcaggatttcaacattggatatgatggaaaagatgttgtgcttcagaacctgattcagatttgcttgttcaaggttggcaatgaaactcacaaaccatgggtgtggtgggattatgtacacgatttttcaattaggtgcccaatgaaggagaagaaatacacgcgtgaatgcgctaatggtgttatcaagtcacttggttggtgtagttaactttgttcagcataattgctttattgtttgaaccaaatggttgatttgaaccatttgatatgtcatttcacaggattggaccttgagaggatcaacaagtgtgtgggagaccctgaagctgatgaagaaaatcccgtgcttaaagcggaacaagatgctcaagtaaagactattgattactaatcataatgtttttgttatgtagagtctgttcattcataaattattcaatagttctgtggtaggttgatctttgtggattttgtcctttcagattggtcaaggctctcgaggagatgtcactatattgccgacccttgtcgttaacaacaagcagtacagaggtgcactagtagtatctattgcgcaatttttctttagctcgatgctgtagcctgttatgtcatataatagtctctctttaggtaagctggagaaaagtgctgtgttaaaagcagtatgctcaggatttgaggagacaactgaacctgatgtttgtttgagtcaaggtttgtaaatttttatgtttcattttatgaagtttactgattttgatcgatgctgtactgatttttctctccttttattaccttgctctctcgtttatagagatccaaacaaatgaatgtttggagagcaatggagggtgctggcaggacaagactaataattttactgcgtgcaaggtataaaattttaatggaaaaatgctactccatccgtttcaggttataagacgttttaactttggacaaagtcaaactgtttcaagtttgactaagtttatagacaaatatagtaatatttataatactaaattagtgtcatcaaatcaataatttaatatattttgataataaatttgttttgggttgaaaatgtagagagaataggagggaacaccacactccccaaagagggggggtgaccatatattatagcctttccaatatacaggatcctcaattagaggagtatacaaggaaactaaggatacaaaagaatcctatacatatatggctatacattcctaatacccgcctgcagtcgcaacgggaggatcacgaacgcaaggactggacctgaaatcagtgaacaactgcacaggcagccccttggtcatgatatcgacgaactgatgggacgacggtacatggagcacacagacctgtccgagagccaccttctcccgaacgaagtgaatgtcgatctcgatgtgcttcgtgcgacggtgatgcactggattggccgtcatgtagacagcgctgacgttgtcacagtaaacaacggtcgcagaggcgatgggggcatgaagctcctggagaagctggcgaagccagcagcattcggcgacggcgtgggcaacagcgcggtactcagcctccgcactagaccgagagacagtcgtctgacgcttggaagaccaagagatcagattgtcgccgaggaaaacgcagtagccggaggtggagcgtcgtgagtcaggacagccggcccagtcagcatcagagtaagccgtcagagacttgacaggcccggtgccgatgtggagtccggcggagagagagcctttgacgtagcgcagaatgcgcgtgaccaaggcaaggtggggctcccgtggatcatgcatgaagaggcagacttgctggacagcataggcgagctccggccgagtgagagtgaggtactgtaaagctcctgcaaggctcctgtactcggtcggatccttgacgggggcgccatcggaggcggagagcttggcccgagcgtcaactggggtggcggtggggtggcattcagacatgccggctcgctgaagaagatcaatggcgtactgtcgctgggacaggaagaggccgtctgaggagcgccggacggagatgccgaggaagaagtgcaagtcgccgaggtccgtcatggcaaactcggagtgcagccgagtggtgatgaggcgaagtagatccgtggaggaggcagtgaggatgatgtcgtcgacgtagagcaggaggtaggcgatgcggtctcgatccttgtagacaaagagggacgtgtcggaggtcgaggcaacaaatccgagctgacggatgtaggtggcgaaccgctggtaccatgcgcgaggggcttgctttaagccatagagagaacgctgaagaagacaaacggcgtcgggcgcggccgggtcgacaaagccggagggctgctggcagtacaccgtctcgtccaacgtgccatgaaggaaggcgttcttggcatcgagctggtggatgggccatgatcgtgaggtcgcaatgctgaggacgactcggatcgtggacggcttgacgatggggctgaaggtctcgtcgtagtcgatgccgtgttgttgggagtagccgcgaaccacccaacaagctttgtaccgagcgagagagccgtcggagtgaaacttgtgcttgaagatccacttgcccatgacgatgttagcacccggggggcggggcaccaagcgccaagtgccgttgtcgatcaaggccttgtactcatccgccatggcagcacgccagttgggatcggcgagcgcgctgcggtagttggtcagaaccggggagatagcggagtgggaagccgccaggatgaggcggtcgacaggcctgagggagccggtctgggagcgcgtgaccatgcggcttggcgggggcggcacgactaggggaggtgccggtgcagcgtcgaggcgcggtggtggcgtggcctgtcgtcgtcgatagacgtgcgggaagggctcgaccagccgtgccgtagttggaagaagaggcccggtggccgtccgggtcgtgggcactgggtccccagcagccggccaagccaacccagcagccgggaccaccatcgtgtagggaagaagcggctgctcgacctcagccgagggagcagccaccaaagacgaccgcaccgggtcatccgtggcgcggggcagggagggccgcggttgctcgacacccgtgacgggtggagcgaccacggtgggagtagtcacttcctgtagcagaaaatcaaacgaagagacatcgaccgggtgacgagcaaacggaaaacaagtctcatcgaagacaacatggcgagaaatgatgatgcggcgagtggagaggtcgaagcagcggtaacctttgtgtgaggtgggatagcctaagaaaacgcatgcggcagagcgaggggcgagtttgtggctagcggtggcactaaggttagggtagcaaagacatccaaacacacgcaatagggagtagtccgggattttattgtggaggagctggaatgggatggagttctgtatggatgaggaaggacgtcggtttaggagatatgtggctgtggctaaaccttcggcccaataggcaggaggcatggaggcttgcaggagaagggtgcggactgagttgttaatggtgcgaagtacacgctcggctttgccattttgcggggatgtgtatgggcaggaaaggcggagcaggcagccgcggctagcaaggaaggaggtggtgctgcggttgacgaactcagcgccattgtctgcctgtatgcatttcaaatggcgaccaaactgtgtgtgtgtatatgcaacaaaatccacaatgtgctggtgaacatcagacttatgatgaagagggaatgtccaacaaaaatgactgaagtcatcgagaataaccaaataaaatttgtagccagaggtactcaaaacaggagatgtccatacatcgcaatgaactaattcaaaaggagaggaagtactggagcttgatctagtaaagggaagacgggtatgtttgcctaattgacatgcatgacaaagggaactatctggctttgacgagggtatggcagagaggcgctatagagcgaggatggctgcagatccgggatggccaaggcggcgatgccaaatggtggtggaggtggcgtggaagcagtgggcggcgatgggtggtgcggctgccggtagggtgtagagatcgccatgactattgcagcgaagaatcacgcgccgggtccggaggtccttgacagaaaaaccaaactcatcaaattcaatagaacaatggttgtcacgagtgaattggcgaacggaaagaagattgcgaaccaaggaaggagcaacaaggacatgtttgagatcaaatttggtggtgcctataggtagaaaggaagagccacgacataaaaccggaatagtgtgaccattgccgacagtaatataggtgtgagagttgggtaagcgggtaacgagtataccatcggtggatgacatgtgcgaggtcgcgccggtgtcgaggacccaagaattggggctgtggaccgtcatctggttgagggcagccaccagtctagcctgatcccaggccggttgcgctgcagaggtggtcggcgacgagtacgggccggcaaaggcggtgtgggcttgaggaaaaggcccgaggatgccgggggcgcgccactgctgctgctgctgctggccggcccattgggagacacagacccatggtccagttggggggcgcgggacagcaaaggagaaggtgccgccgccgccgccttgacgatttccaccaccgctgccgctgttgttgccgctgttgttaccgccgccattgcggttgtagttgcggccgccattcttcttcttgtttccacccttgccgccacctccagtggaggagcaggagcccgaggggcaagaggcagcagcgctgcttgccgcgacaagggcggtctctgtctgaactttggcgtcgttggccagacggagttccttgagaacaagggtgttccgcgcagaagcgaaagacgggaggacaggagcacttgcgatgttgtccgccgtactggtgaagttggagttgacgccgcgcagaaggttgagaaccagctgcgactccgtgacggggtgcccgacgtcgcgaagggcatcggctgccgtcttcatgcgctggcagtaggcagtgatggagagatcgccttggatcatggagcggaactcatgatgaagaaagattgcacgtggttccttgttcgcttgaaagaggtcggcgatggcgagccaaagggcgcgagccgtctgatccggttccatggcgaggtcgaggacgtcgtcggtgaccgagccgaatagccagctgcggatgcagaagtcggcttgctcccatgaggtgtcgggggctgcaggaggtgcggagtcgtcgaggtggtcgaggaggccgaacttgccgcacatcgagcggaagaaggtcttccacttgttgaagttggggttgcgaagctcgagggagatcgggacatgagtcttgacggagatggtcgcgtacgggttgacgaagacggtcgcgacggagttggtggaggccgatgctgtggagttgtcggtcgcagcagaggtggcagaagacgtcgacatggcgacgaggagggcggcgaccagcaggggacgtcgccggcgcaaggcgcaacacagaggggagatcaggggtgcggaaggaaggagtagaacctgaaatctgataccatgtagagagaataggagggaacaccacactccccaaagagggggggtgaccatatattatagcctttccaatatacagggtcctcaattagaggagtatacaaggaaactaaggatacaaaagaatcctatacatatatggctatacattcctaatagaaaatgttactacttttttttataaacttggttaaaattaaagcagtttgacattgaccaaagtcaaaacgttttataacctgaaacggaggtagtactacctattgataatctgatactggttacgacattcacctctattcagtttgaggtgcacattcttatttgctgtgttacatattgtaggacaccttccgtgggcgagtttgtgaatgccctattgcccgtggtgtgaagttcgttggtgacgggtacactcactgtgaaggtacacatttgcattttatttcgtcaagatgggttggcagcatttatttctttggaatcattttttcatttgtttgaaacaatactgtttccttgctatagactgtgctatgcataacacatcctaattgttttattatttcaactattagtattacattgtttggtttacggctggccctttggcagcttctggtgtcggtaggtgccaaatcaacaacggaggctgctggaaggaaactaaaaatgggaagacggtttctgcctgctcagtaagaatctcttccagaggtcttctagtttgcggctgttctatgaggtcagaactaatcatggaactctacagaatgaagaatctaaaggctgcaaatgcccaccaggtttcaagggtgatggtataaaaagttgtgaaggtaatattactccatgtggcaaaactttccttttaaatatagaaagattgatatttctgcttgagccaaccatcttgtaaaacccatacaaactagtactggcaaaccctgaatagtttgaaactgttaggtgattacttaacatatctctggttggcgttttcagatattgatgaatgcaaagacaagcttttctgccagtgcaaggactgctcttgtgagaatacatggggaagctatgagtgcagctgtggtggaagtaatatgttatacatgagagagcatgacacttgcatcagtgagtcccctaacctttttttttgttcccttgtagtcttatattgttcaattttctacttatcggcattctggaccttgtgatcatgttctgagattgttatcccaacatacacttgtatcatcccttgttactcagccttgaaacttctgtagaaatttcagatgttcctagttttgcttttgcgatagtccatctgctggcggcttgaaaatatgcaatgcaagtctgcttgactgcgccatgatctggatcattgtcatgtttgataacggactatcacaaccaaattccttttgaaagatatcacaattctttcatgcctcattcaaaatgttgtatgttatgttatgttgatttgatgcaaaacaggagtggaactttgatgcacacataatttcattcgctttagaacgttttatgtgacgcctttcgcaatcactgtgcaggcaaagttgcttcttcgtcagtgggctggggcttcctttgggttattttctttggcctcgctttggctggaattggagcatatgccgtatacaaatatcggctacgggtaaacaactcatccttctattctaatccatctccgaatgatcacgtaattttctagttcttcttatgtttgcaataatctacggctaactcatactttgtgttaccatcatgccaaaccagagttacatggattcagagattcgtgcgatcatggctcagtacatgcccctggagaatcaagaaacaccgaatcaacatcgtcctgtggagcatgctgatatctgaaattgcagcaagcttaactgggagctggcagcagtatcggtggtcgccatcttgacagagtggtaggcttggagctaccctttgtgcccagaagataaaaaaaaattcagtatagcttatgtttctgaaacgacaagatttttgcatatcctctttttctctttgctgaaacttgcaggacagattaggatctccccagaattaacacctcattggcctctagtcataattatgagcttctggtcttgttcttactctactcctacatgtttttttgtttttcagcgagatactcctatatgttaaaagcttgtaaatactgttgttcagacaatagtccttaataaagagaccggaagagcattctacacct</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067178.1 RefSeq:Os07g0680000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 7]]
 
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[[Category:Chromosome 7]]
 

Latest revision as of 14:24, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information