Difference between revisions of "Os06g0167500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0167500| Description = Leucine-rich repeat, plant specific containing protein| Version = NM_001063456.1 GI:115466643 GeneID:4340252| Length...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os06g0167500|
 
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Description = Leucine-rich repeat, plant specific containing protein|
 
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Version = NM_001063456.1 GI:115466643 GeneID:4340252|
 
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Length = 9928 bp|
 
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Definition = Oryza sativa Japonica Group Os06g0167500, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
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Please input expression information here.
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AP = Chromosome 6:3407661..3417588|
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CDS = 3407672..3408008,3408128..3408287,3408386..3408457,3409608..3409679,3410480..3410548<br>,3410960..3411031,3411112..3411183,3411890..3411961,3412069..3412143<br>,3412683..3412751,3414002..3414067,3415047..3415115,3415206..3415250<br>,3416005..3416066,3416279..3416637,3416761..3416947,3417049..3417233<br>|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008399:3407661..3417588
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source=RiceChromosome06
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008399:3407661..3417588
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source=RiceChromosome06
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgttgacaagttgggaggcaattctggaaaaaatgtccaccgcgccgcgtctcccgccgccgcgcggagcccccgctctctccgtctccgacgaccaagccccacgacctcgtctcgccgaacccacgcgcggtcaacctcccaaacccctcaagtctccactctccacctcctcctccccctcaccaagtcaatctccacccgacgccgccccgcccatggcttctcccgccgcccccctcgccctcctcatcctgctcgtctcgctcgccatcgccgccgctcagtccggccagccgtcgtcgccgccgagaaacagcaccaacatctctgatgcggccgccctgcacacggtgttcgagaagtggggactggaggatggcaccatgccgcaggggtaccacccgtgcgggaagctcgtctggtctaattcgtcggaaatggaagcgtccatcaactgctcttgcagcagcaacgagtgccgcattacgcacctgaacgtcaccggctacaggaacatcacctttatcccagcggagctcttcagtttgacggagctggtctctctggatttaagtaataacaacctgattggtcaaatacctccccaagtcagcaatctatccaagctggaaacatggcacttcaacaataaccggctcaatgagtcctttcctaatgcatctgcacttttaagtatacaatccctgtggatgtttgataatgacatcgaaggaatggttccaggatttattgcgaactttgccaatcttacagatttgagaatgtatgggatgaaacttcaaggacctattccagaaaatttctctaaattgatcaatatagaaaatctcatgattggtgaccttgataccgagggctatccttttaatttcacaggagattgggtaaatctttcaacgttatctctgaggaattgtggattcacggggaagtttcctaaccaaattctgaagaatctgaacaaattaacatacgtagatttgagatcaaacaacttgtcaggatcaattgaccttcagcagtacgatagtagcctaaagtacctttatgtaggtgaaaacaatttcaatggatctctgcctgatcaaatgcctcaatcactagttgctctggatgtcacatataatcctttgcttaggggaaggcttcctagcagttctgctgatagaaagatgcggataaattatattggaacttcgattggtgcaggaagctcagttggcagtgaaaaccttcgtctcctcaattgtgtcgacatgaaaggatgcaacacaacaggtttaactaatcctgtatcctttgctgtgaactgtgggggcaagcaatatactcctccttcagatccgtcgaatatgttcaatgacgactccgctaaccttggagcagcagactttcatgtggacactaataataattgggtagtcagtcatgtgggcactgatccttttagtaactcttctggtattgtaactaccggcaatggaacaaacatacctgagctctacagaacggcaagaacatcaactggttccttatggtactatgtggttggcttgcctagtgggaaatatacagttcaactcttctttgcagagatagttatagaaagtggatcaggaaggcgtttatttaacatcgacattcaggatcggaatatcatgacagattttgacatttccaaggaagcagggggttccaacagacccattaacagaaattatacagcggatgtcaccacctcagtgttgaaaatacatctctactggaatgggcgaggcacttgctgtattccacgcaatggaacttatggtcctctggtgtcagcaataagagtattcccttccgcggagacgcaagccagcccccctcctgtggcgcttacatcaaggcacgatgaaaagcgaagaggagtggttgcaggaattgctgctctttccatagctgctacagtgatatcttcatcagctgtctacctctggtggaaatgggtttcacttgtgaagcatcgaaaggcatga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MLTSWEAILEKMSTAPRLPPPRGAPALSVSDDQAPRPRLAEPTR                    GQPPKPLKSPLSTSSSPSPSQSPPDAAPPMASPAAPLALLILLVSLAIAAAQSGQPSS                    PPRNSTNISDAAALHTVFEKWGLEDGTMPQGYHPCGKLVWSNSSEMEASINCSCSSNE                    CRITHLNVTGYRNITFIPAELFSLTELVSLDLSNNNLIGQIPPQVSNLSKLETWHFNN                    NRLNESFPNASALLSIQSLWMFDNDIEGMVPGFIANFANLTDLRMYGMKLQGPIPENF                    SKLINIENLMIGDLDTEGYPFNFTGDWVNLSTLSLRNCGFTGKFPNQILKNLNKLTYV                    DLRSNNLSGSIDLQQYDSSLKYLYVGENNFNGSLPDQMPQSLVALDVTYNPLLRGRLP                    SSSADRKMRINYIGTSIGAGSSVGSENLRLLNCVDMKGCNTTGLTNPVSFAVNCGGKQ                    YTPPSDPSNMFNDDSANLGAADFHVDTNNNWVVSHVGTDPFSNSSGIVTTGNGTNIPE                    LYRTARTSTGSLWYYVVGLPSGKYTVQLFFAEIVIESGSGRRLFNIDIQDRNIMTDFD                    ISKEAGGSNRPINRNYTADVTTSVLKIHLYWNGRGTCCIPRNGTYGPLVSAIRVFPSA                    ETQASPPPVALTSRHDEKRRGVVAGIAALSIAATVISSSAVYLWWKWVSLVKHRKA</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
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DNA = <dnaseqindica>12..348#468..627#726..797#1948..2019#2820..2888#3300..3371#3452..3523#4230..4301#4409..4483#5023..5091#6342..6407#7387..7455#7546..7590#8345..8406#8619..8977#9101..9287#9389..9573#gaaggggactcatgttgacaagttgggaggcaattctggaaaaaatgtccaccgcgccgcgtctcccgccgccgcgcggagcccccgctctctccgtctccgacgaccaagccccacgacctcgtctcgccgaacccacgcgcggtcaacctcccaaacccctcaagtctccactctccacctcctcctccccctcaccaagtcaatctccacccgacgccgccccgcccatggcttctcccgccgcccccctcgccctcctcatcctgctcgtctcgctcgccatcgccgccgctcagtccggccagccgtcgtcgccgccgagaaacagcaccaacatctctgatggtacggatttttctcactcgctcatgtgatgccctaatcgcgatgagttggctagctcgaagtcgtcgcggatgtgtgcgtgtgtgtgtggtgaccgagtctctctgtcgtccccgcagcggccgccctgcacacggtgttcgagaagtggggactggaggatggcaccatgccgcaggggtaccacccgtgcgggaagctcgtctggtctaattcgtcggaaatggaagcgtccatcaactgctcttgcagcagcaacgagtgccgcattacgcacctgtaagcgtgcacacctcaaatcctcgattggtttctgacgcctcactttgtgggggaaggaaatgaaatgatgggtgttctcaccctggatgatgcaggaacgtcaccggctacaggaacatcacctttatcccagcggagctcttcagtttgacggagctggtctctctgtgagtcctgtcatcggtatccgatatcgtaaaactgcttatcttaggaaatgctacaattgatctgttgtgaacttgtgataggttcatgatttcttcgatagagatgcgctttgtagttgttataatcattactcagaaggctgttacttgttagtatttactggggtaaaataataatatgtataactgacgtttccatgcctaatgtggacctgtcgatacatgtatggtatactccctccgtatcaatttacttgctgttctatgagaaactagtagaacgacaagtaaattgaaacagaggtagtaaaataaatggtgctatgagaagaatctattacgcattcttcttactccttactattcacgtacactagtttcttacttcagacacttctttcatctgtaccatattcacttgatactagaacaacccgttataggtgtaatgccatgttataatttaatggtacagattaataatcacaatcaaatagctctcaacacacaagtttgtgtagcaagcgacaagttgttactgtgttgtaattagctgccatgaagtgcatgatgtccctatacttggaataaaatctaatgttctgtgcacatgcattggaaattgatgattttctgaggagaatgagaatctattctgcactgcaaatgctctttacttgcatttcagatgctatgttggtagttcggtatacataggtcattttttttagaaaatggattaaaacccggcctctgcatccaaaaggatgtacacgacgctgctttcatatatttagagggtttttattttcatactgcatatatcctgccaacctactgaatagcgatttggagacaggattgatgtttgtccagtgtgcatgtcaaatgtactcacattgtgagtttgaatataatgaaagtttttaaaaacttgtgctatccaattatgcaacattttaaccaaactgctaagatccaaaactaatttaccattcttttacatattatccaactggctttagaaggtagcaaacatctttagtgacactcctttgcagtagtatggtgagatataactgctagatgcttgtagagtgacataagggaacttttgattgtaactagtcctcttttctttctgtagggatttaagtaataacaacctgattggtcaaatacctccccaagtcagcaatctatccaagctggaaacatggtgattatgaaacaactttttgttcctttgcagcagcattcatcaattttataagaacttaattgcgttacattcttgtaatggtacatccaacttgttgaatgccatgggacttcccagtattgcctaatgccttggacactttcatatttatataatacttattcccttaacgagaaactatctgcatgtacctaaggtatttctttttaatatttgaacctttttttaaagaattaaaataaactcattcacaacttatttccaaatctggagcctttctccagactacttcagttggcacatgaaaaagaactgctaatcaggaggaatgtcataggatggcaagagtcaagacaatgctgccaccatggtgggtggtgtagcactgtagcagcactgttttgccacagcagtacacatctcatggccaaggggtttgtttttaaataagatgttaactttttataaaaaaatatattaagttctaaaattagaaaaaaatccaaggtatttcatatccagacatactcctttgaagtttgagatagcatcatcgcctgtctctgatagcaaagccctttttggtacaatactactttggtttctagctgtgttactttaggacctgtctgtaattatagaaactatccaatggtttatccacttcatatttacattgtaagtattacattgtatgtgaagaatctccgtgcctcatatttttctttgtgctcaagttgtctatttcaatattatttgttggcaaagacaccaagaccttacctccaaatctacaggcacttcaacaataaccggctcaatgagtcctttcctaatgcatctgcacttttaagtatacaatccctgtaagtgtgtttcatttccattttcacaaaagaatcattttatttgttttcactatcaacatcacaaacaaggcctgtttgaaaaataattagattacattgtattttgttcagaaaaaggtaatactccctccgtcccaaaatataagcattttagcatagtgtaagtcaaatattttttactttaactattaaaagcaaaaaaataaaaatgatcaatcatgtaaaattgatgttattagatttatcattaaacaaactatcataatatgcaactcttttttatttaaaacatcttacttttatagatattgttagtcaaagtagcatctcgaagattgtatcaaggtccaaaatacttatattttgggacggagggggtactaattaacttattggcattctatgcaggtggatgtttgataatgacatcgaaggaatggttccaggatttattgcgaactttgccaatcttacagatttgtatgcataactacttgtccttatatttttctgtaactcctttctttccaacctgagaactaatatgattgtcttgctaggagaatgtatgggatgaaacttcaaggacctattccagaaaatttctctaaattgatcaatatagaaaatctgtaagccactttaattgtttgttttattaacagcacaatcagtcgtacaccgttataaagggtagaaattggatatgttcgtgttgctctccaaagatagcagactatgctgatcctattccaaaagtggaaaatatttgtatgtgccactataacagtttggcaaggccaaatgactacttaactgttccagaagtacaattaccaaatgattgtattgagacctacaagtttaaacccaataatcaattatctgctatcataattttcattagttaactctaaatctaaagctcactgatttcttgtcctaaacttgactaattacctccagtttcaaaagaataattgtatttttaatattgcagtggcatataaagagttatgtagatgtaatcataatcacggttacattgacaaaaagaaatttcatttttggactgataaatttttaaaatgcttacttctgcagttgtatataactaatttcaattgttacaatgaaatatcttttagttttcgtgttgtcatactacaagtaaaggtattctggaagatattgatgtaatactgtatttaatcttaggccttatcatctagagaatcttcttatctgtcccatagtcaggacaaccaaattatcatttgttgaaattcacaccaatctgatttcattattaatcacattaaccaccttctgttgcagcatgattggtgaccttgataccgagggctatccttttaatttcacaggagattgggtaaatctttcaacgttgtacgtttgcaactgtcgcactccttatttcttttcattggactatttgttttgattgttgttggttgatacaagttctaagtacatgctttgtttttgctaagcagatctctgaggaattgtggattcacggggaagtttcctaaccaaattctgaagaatctgaacaaattaacatacgtgtaggtttcagaaaatcttttgtttgcttatgctcaatggcacactctccatctggggaccacaatccttgtctatgtcgaacaggggccctcttttgtgctctttgctgtcagtgaggtgatgttgagtgttctagaaaaaagtgaggtgatgttgcttagtagcatgagggtgcttgatctcagaaccatcgtgaccccatcttctaatagagtttcaaagaacgactaaatcttatgttaatcaaaccgaaacataattggaatctcaaacacttcaatttgggaaaagaggggggtgggctgtcaatgcaccttgcaggcaacaactttaaatttggctgcagaagcctatgcctatttgattttgttgttgttcaaaaaaacgttacaatacaataaaccatgtattctgatattaatcttcaatattacaatgaatgtgaacattgaaataactactgtttttatttgcgatgattctctccttctctgcctgtttctctctcttactctctcaatttgccttatgtttgcagagatttgagatcaaacaacttgtcaggatcaattgaccttcagcagtacgatagtagcctaaagtacctgtaagttggattcttcgtgaaatatgatttgttaaataagaaaattaatttcggatgagatgcttgcgttagggaacttggtagtgcttgcaagttcaagttaaaacccattgtacatgttgaccaggtcgctcaacagcttttctttacatgtatcttgggatatgacctttcagtcagtaatgacatagacaagcgacatctttaaactatcatgttgtctttaaactattaaggatggatggcgaaattaatgtatctttgctgtccgagtttcctcattgctatccttgccaaaaaggaaagtcttcgttttctagagaccttgcttggttgcatttgtgccagggtttgcctgtctactcgtctggcttggaatatctacttcaatatctgatttatcatcactaactatgtaattttaatgtccaaacaatagtaagaggccttcaggggcacgagaagatgacaatactgccaccagggatgaacctgcctcaaagaatatgatgtgtttcacaatgctgtgattaatccgtcatctgaacacgtcacttctgaaattcttgcagtgccatacttttgttcaactgtaggattgtgttctggggaagctattgtttctaattgagagctgaaatcatgctatacttacgaatattttcagtcttccaccagcacttcaggaatttgtaattgaccatgctatacttttcagaatatgaattcccagtatgttgtagagtcagcttctaagctctaattcgtgcgcaaaatttggaaaccttatacattttaaagttttatctaattaccttttctttttaccgaaggttttatctaactatcttgagagctaacatgtttatttcaaattatcagtttgaatctggctaaggctgtgttctttgcctcaagtttgagagacatttttagcgcacgcgaaacgagaaagctcattaacacatgattaattaagtattgataattataaacttaaaaaatggatttatttgaatttttaaaacaacttctatatagattttttttaaaaaaagtatcatttaacagtttgaaaagcgtgctaacggaaaatgaggaagttgaaatttggagttgaagaaaagaactaggcctaaatcaataaactattggtcattggggtgcatatattattatttattcttttccatttttatttttccaagttattgtttaccctgcctttctgatgattttttatttgttagttatgtaggtgaaaacaatttcaatggatctctgcctgatcaaatgcctcaatcactagttgctctgtaagtctgctgtttgcatttgctgattgaagtgtaggaaaaagcattttataatgtgaacttcatggatggaaaacaaatggcacgatttttccacctgggcaactattatatgttatattttcatcagctactgttgcaagcaatccctactacttaaaatatttcgtactctgtcaaggtgcatactgttacacaaccgtcttcaaatactaaatgagaaagaacggcaatatagcacaaatcctttccttgtcagctaatccttcttctcccaagctgataagaggataagagaaatcctttccttgtcagctaatcctccttcacccaagctaataagaggaaaagagaaggcagaattagatgcaactctatttgccattttacatttcatgcaatgtggtcaagttcagcatgctcatagtgcctaatttgatggtggagcatgtgggggacacggtacccgggtgccctagaggaggcctttgggttgtactgcatagggtgggtcgagtgccttaggcccatgcaacatttttgtatagaaagggataagagataagaaagtctatccaatcccatgtaaatagatggtagatacccggattattatggatatcgcgccatacatgccgccggatgccctagcactatataaaaggcatcggtaggaaccctagagaggttagacaccattatacccaccatcagccactccattgttgatttgcacacacctcgtagatccaatctacgctaactggactagggtattacctcattcgagggcctgaactagtataaatttgtgtcaccatctctccttgttctcgtgcaccctataaattatattaccgatcataaaaatcgacagagcatatgttgaagtaggatagattttcttccctagtacaaagtacaatctgatattaaacctgtctaacaattctcctttcctttttattgaaaactacagggatgtcacatataatcctttgcttaggggaaggcttcctagcagttctgctgatagaaagatgcggatgtatgccatttacttgtattaagcactagactcaactgattgttacagtggccttactcattattttgtgaacatgtcttttatgcatagaaattatattggaacttcgattggtgcaggaagctcagttggcaggtaagcaacacttgaaatggtttatgatattgttgtcatactcatataagctcattgaaatagacttccatcatcgaacaagtaataatttaatcactatgctcctatatttgctctctttcttgctattgtttaaagaaacaatcaaataagtttaactggttaaggacagtttaagactgaagggctctcaagtttgctatgcaattcatgagattgaggcaaacatttagaaattcctttttatatttttcatgagattgaggacatattatttgttaagagaactgcataacccgtgttagaggatttggggaggtaaaataattcttaacaaggagaatgcgtgaattggaaacttgactgtaggctgatagcgtcagcaacgcagacttgataattttagaacgtacaagcattccttctagtatgcattagaatttactaattttgtttcttgattactttagggtgtgtttggaactccaagttcccaactctcttgcttcgtttttcgtgcgcacgcttttcaaactgaaaacggtgcgcttttttgcaaaaagtttctatacgaaagttgcttaaaaaaatcatattgattcatttttgaaaaaaaaaattagcaaatacttaattaatcacatgctaattgaccgctctgttttccgtgcatactatttgggttggtaaccttcatatgcgaacagccaaaatagcatgcaacatattatttactttctctattatcatgcagtgaaaaccttcgtctcctcaattgtgtcgacatgaaaggatgcaacacaacaggtttaactagtacgtttaaaaaactttgaccattgacttatgaacataccttactttcctataagactactagtactagtacatgctgataatgctgcaattaaccgttttgatgtaaatatttatagtgctgttggagatttgtcaatgcttctaaaggttcactttagatcattccagtctatttgggagtcttattcatcatcacaccataaatgcagatcctgtatcctttgctgtgaactgtgggggcaagcaatatactcctccttcagatccgtcgaatatgttcaatgacgactccgctaaccttggagcagcagactttcatgtggacactaataataattgggtagtcagtcatgtgggcactgatccttttagtaactcttctggtattgtaactaccggcaatggaacaaacatacctgagctctacagaacggcaagaacatcaactggttccttatggtactatgtggttggcttgcctagtgggaaatatacagttcaactcttctttgcagagatagttatagaaagtggatcaggaaggcgtttatttaacatcgacattcaggtctgatcactctctctctctctctctctctctctctccaagtttaacaatcttaaagcaaaacaaatggcacatccagaccatatgggcaaaacatgaacaaaaatgtgtggttacctgcaggatcggaatatcatgacagattttgacatttccaaggaagcagggggttccaacagacccattaacagaaattatacagcggatgtcaccacctcagtgttgaaaatacatctctactggaatgggcgaggcacttgctgtattccacgcaatggaacttatggtcctctggtgtcagcaataagaggtaaattacagactcacagtacatattctatttttcttgattaccttttttctggttatcaggtaaacattgactgacaagaaaatgctctactttctcagtattcccttccgcggagacgcaagccagcccccctcctgtggcgcttacatcaaggcacgatgaaaagcgaagaggagtggttgcaggaattgctgctctttccatagctgctacagtgatatcttcatcagctgtctacctctggtggaaatgggtttcacttgtgaagcatcgaaaggcatgaggtgttcagatgtgcatatacaaagctggttgttttaattttgttccttctgtcttcttagcatgttcatgagcctatgtctgtattgtatgggcattgagctgggtttacatgagctgtacaggaaaaggtactgtgtaacgtcaagaggaaagcaacaatattgatgtacagtttggtttgtggtcatgatttttagcctatagttttgttgctctaccatcatttatagccagggtgtaatctcaagttaatttttttttgaaagttttgtacatgttacttgtatcaatttgtaaagcttttttgcacccatatcaatgtgtcaattgacaccgaagatcatttgtttacg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063456.1 RefSeq:Os06g0167500]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 6]]
 
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[[Category:Chromosome 6]]
 

Latest revision as of 08:47, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

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Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information