Difference between revisions of "Os06g0548000"

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(Created page with "{{JaponicaGene| GeneName = Os06g0548000| Description = Aspartate aminotransferase (EC 2.6.1.1)| Version = NM_001064360.1 GI:115468451 GeneID:4341252| Length = 4476 bp| De...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os06g0548000|
 
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Description = Aspartate aminotransferase (EC 2.6.1.1)|
 
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Version = NM_001064360.1 GI:115468451 GeneID:4341252|
 
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Length = 4476 bp|
 
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Definition = Oryza sativa Japonica Group Os06g0548000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
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Please input expression information here.
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AP = Chromosome 6:21604296..21608771|
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CDS = 21604571..21604643,21604753..21604847,21604950..21605045,21605165..21605324,21605667..21605839<br>,21605925..21606029,21606283..21606388,21606564..21606770,21608301..21608386<br>,21608478..21608768|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008399:21604296..21608771
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source=RiceChromosome06
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008399:21604296..21608771
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source=RiceChromosome06
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgcacacacgcagccgtcggcttggtttcccccccctgaatccaagtcacctcctcctcacacctcaccttccccctctctcctccgatcgcgcgcgcatggcgatgtcacgagccgccgccgctgccgcggggactcccgtggcgcggcggcgattgatgggggccgtggcggcgaggtcgatggcgtcgtggttcggccacgtggaaccggccgccaaggaccccatcctcggcgtcaccgaggcgttcctcgccgacccctccccggacaaagtcaacgtcggcgtcggcgcgtaccgggacgacagcgggaagcccgtggtgctggagtgcgtgcgcgaggcggagcggcggatcgccgggagcatgaacatggagtaccttccaatgggtggaagcataaagatgattgaagaatcacttaaactggcctatggggagaactgtgagttcatcaaggacaagaggatcgcagcagtgcaggctctttcaggaactggtgcatgtcgcctctttgcagatttccagaagcgtttcttgccagattcacagatttatatacccacacctacatgggccaaccatcacaatatttggagggatgcccaagtaccacaaaagacatttacctattaccatccagagtcaagaggacttgactttgcaggcctaatggatgatatcaagaatgctccagatggttcattctttttgcttcatgcttgtgcgcataatcccactggagtagatccttcagaagaacaatggagggagatatctcatcagttcaaggtgaagaaacattttccattcttcgacatggcataccaaggatttgctagtggtgatccagagagagatgccaaggcaattcgaatatttcttgaagatggacatcaaattggatgtgcacagtcatatgcgaaaaacatgggactttatggacaaagagcaggatgccttagtattctatgtgatgatgagatgcaagcagttgctgttaagagccagttacaacagattgctagacctttgtacagcaacccacccgttcatggtgcattaattgtttcaactattcttggtgatccggagttgaaaagtttatggctgaaagaggtcaagggtatggctgatcgtatcattggaatgcgaacagcactcaaagagaaccttgaaaagttgggttcaccaatgtcatgggaacatatcactaatcagattggaatgttctgctacagtggtatgacacctgaacaagtcgatcgcttgacaaaagagttccatatctacatgactcgtaacgggcggataagcatggctggagtaacaacaggaaatgttgcctatctggctaatgctattcatgaggttaccaagacaaagtga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MHTRSRRLGFPPLNPSHLLLTPHLPPLSSDRARMAMSRAAAAAA                    GTPVARRRLMGAVAARSMASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRD                    DSGKPVVLECVREAERRIAGSMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAA                    VQALSGTGACRLFADFQKRFLPDSQIYIPTPTWANHHNIWRDAQVPQKTFTYYHPESR                    GLDFAGLMDDIKNAPDGSFFLLHACAHNPTGVDPSEEQWREISHQFKVKKHFPFFDMA                    YQGFASGDPERDAKAIRIFLEDGHQIGCAQSYAKNMGLYGQRAGCLSILCDDEMQAVA                    VKSQLQQIARPLYSNPPVHGALIVSTILGDPELKSLWLKEVKGMADRIIGMRTALKEN                    LEKLGSPMSWEHITNQIGMFCYSGMTPEQVDRLTKEFHIYMTRNGRISMAGVTTGNVA                    YLANAIHEVTKTK</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
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DNA = <dnaseqindica>4129..4201#3925..4019#3727..3822#3448..3607#2933..3105#2743..2847#2384..2489#2002..2208#386..471#4..294#gcgatgcacacacgcagccgtcggcttggtttcccccccctgaatccaagtcacctcctcctcacacctcaccttccccctctctcctccgatcgcgcgcgcatggcgatgtcacgagccgccgccgctgccgcggggactcccgtggcgcggcggcgattgatgggggccgtggcggcgaggtcgatggcgtcgtggttcggccacgtggaaccggccgccaaggaccccatcctcggcgtcaccgaggcgttcctcgccgacccctccccggacaaagtcaacgtcggcgtcgtgcgtatctgttcccttcctcctcctcctccgtttcatcatgaattgtctcgattgatccccgagctgtgtgtgtgtgtgttcgccgcagggcgcgtaccgggacgacagcgggaagcccgtggtgctggagtgcgtgcgcgaggcggagcggcggatcgccgggagcatgaacatgtgagatctcattcggctccgcttttctttttctttttttttcatcttctctcctttttttttcttcttctcgcgtgtgatcgcaaaactgctagctggtgcgactagtttttcttaggtcctggggaatccattgatggctttgacgtcgactgccaacatattgcgtacgctttcctgcatttatgttcagcatttgatggatcgtgtgcgagttcgacatgttgctggccaattttttcttcaggggctcttaaaaaagaagaagaaatttaaagggagcattcatatctgtcaagttcaacacattactactatcatgttaaccggtctttttttaacacgaactccatttctaattgttacgattgatactactattgaagatttgaccaactcggagataactcatagcttttttagaaaactatttgccttgcatttgagtaatattttctagtaaaaagtatttaaaaattcatttatcaaaataataatcaagttttaaaaagtgtagtactaacagtgacaaatacgtttcgaggaggtagtgctccctgttttttccttaaagaatgactcttcggtgttccaggtggcgcattagaaaatagtcatatcctaatcatggtggttggagtccacgatgacacacattttgttcgagtacctgaggatttagccttctaatcatttcattggtggaatggaattgcaaaacaggggcacttgttgcggcttttctccattgttcgtcttttcctctgctttagaaaacggtggaactttgcttggtccatagggatgtgctactactgattgtttgatgtgaccccaacttttatatatgccgttgccagcttgatgtgcaatcttgtgacttaaattccacttgttttctgtcatccctcatttaacttctcttcaacaaggggtgctgatcagaatttatagtagtatgtaaattcactttgatttctttattggagggtcactaactcactatcctttcagctaagtagggcacggtgcaaagtaaaaaaattcagtttgaactatgtttacacatttttgtgctatgctacgttttttttccttaacgctttggatatcgaggcagtctccaatgcatatgtttcatcattatttttctcactatatatttacaaaattaatttaaagtattactatatgaaagtgattttcatgaaaatattctaatatcattttcacatatcaaaatctatcatttttttatctcttcatgatttaagattttgagttttcactgaacgcattatatgatatctgctctttaaaaacagagggagtgtcaatttattttagattctcgagtgtgtcagatgatatagttacaaattgcaatatattgcgaattatagaaaatggggattcactagggtacatctacatgttcagttctagaatatatgtgagtgcttaaaatgagttcttctaatcttaaaccattttgttcgcggaactaaaccaatcaaatttgcaaattagggagtaccttccaatgggtggaagcataaagatgattgaagaatcacttaaactggcctatggggagaactgtgagttcatcaaggacaagaggatcgcagcagtgcaggctctttcaggaactggtgcatgtcgcctctttgcagatttccagaagcgtttcttgccagattcacagatttatatacccacacctacatgggccaagtaagttgggatatattctactttgactttcacacagttccacgcatgtttagactccatttttttctgattgatagacccatattttcagcatttatttatctttgaattttttttaagcatctctttggtagtttgcattctttatacgtgcttagctcatgaaattcttcagccatcacaatatttggagggatgcccaagtaccacaaaagacatttacctattaccatccagagtcaagaggacttgactttgcaggcctaatggatgatatcaaggtaatttatctgttcatgaaaaatctttaaaatgacttggaccatattttctgtgctgttgtcagatgctgacccttagcttctcaaaaatcccacgcttgaagtaaatctaatacagaaatgaaaaacttcccatcctcttgaatttgaacaatgaaaaacttcccattctctggtctggaggtttgtgccttgttgacaggttgtttttgtttacatctaatttcatttatcatttcctttggtatcccagaatgctccagatggttcattctttttgcttcatgcttgtgcgcataatcccactggagtagatccttcagaagaacaatggagggagatatctcatcagttcaaggtatagaaaggtgacaattgtcaatggtcatttgctatattgtttttgccagttatagtagttctattttcttgatgcctttcaggtgaagaaacattttccattcttcgacatggcataccaaggatttgctagtggtgatccagagagagatgccaaggcaattcgaatatttcttgaagatggacatcaaattggatgtgcacagtcatatgcgaaaaacatgggactttatggacaaagagcaggatgccttaggtattcatttccctgttttaattgtcctttttttttcttctgcaacagctcattcccatctcttttaattatgtttgttttggatattttcctgtcttttcccatttctccagctacatgttagtcccattatatagtgggcattcaatcaatagactttgaactttacagattcaatgaatgaactgggatttgcccttggggattcaacagaagttactgtatttctcaaggcatacattgaagatgtttaaatcttttctcattgcacttattagaacaaaggctttgaaaacaaacacaattgagagaccattccttaattttatcttttttctgcagtattctatgtgatgatgagatgcaagcagttgctgttaagagccagttacaacagattgctagacctttgtacagcaacccacccgttcatggtgcattaattgtttcaactattcttggtgatccggagttgaaaagtttatggctgaaagaggtcaaggtagttatagttcatccttccaaacccttttaaagtaaagaaaatttatgaaaactgtcataattataagaattggtgtgtttggagttgagcatttccccccctgccatttgtctcagggtatggctgatcgtatcattggaatgcgaacagcactcaaagagaaccttgaaaagttgggttcaccaatgtcatgggaacatatcactaatcaggtaacttagcaatcaaacaaattatgctttgatgggaatttagcataatattagttctgaaattgtaataatgcaaaaatattcttttgattttgtggacagattggaatgttctgctacagtggtatgacacctgaacaagtcgatcgcttgacaaaagagttccatatctacatgactcgtaacgggcggataaggtactcaatctttcatatatagagagctcctaattctgttttcctcgtacatctatctgcatttcatgagtgagctgagcctaatttttttcattctctcctccttcagcatggctggagtaacaacaggaaatgttgcctatctggctaatgctattcatgaggttaccaagacaaagtgagagtgttggagacattcctatcatcattttcagtacctttttaccgaccgcaaaatgggtcaaatggtgaaataaaattgtagtccgatatgatgtgaaataaaatggctggtaagctagaaaagggcaagtttattttttgaggacaagacttttgctgtaccagtgaaaacattttttaggacaagactttacagttagaacgaacgttctaactgtgacagtgtcatgctttgtaaaggaagtgtacctttccaccgatgggcatttttgat</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064360.1 RefSeq:Os06g0548000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 6]]
 
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[[Category:Chromosome 6]]
 

Latest revision as of 08:57, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information