Difference between revisions of "Os01g0176500"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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GeneName = Os01g0176500|
 
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Description = Conserved hypothetical protein|
 
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Version = NM_001048717.1 GI:115434847 GeneID:4326223|
 
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Length = 3273 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0176500, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
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AP = Chromosome 1:3938133..3941405|
 
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CDS = 3938389..3939727,3939828..3940203,3940299..3940516,3940607..3940769,3940866..3941100<br>,3941186..3941353|
 
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GCID = <gbrowseImage1>
 
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name=NC_008394:3938133..3941405
 
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source=RiceChromosome01
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008394:3938133..3941405
 
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source=RiceChromosome01
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggcggcgacggcgttcacggaggaggagaaggcggtggatgactcgctcggctaccccaaggcctacgcgcgcctctgccgcggcggcggcggtggcggcggtggactcccgtacggccacggcccgccgcacggcttcctcccctacgtcctccacccgcacgaggcgatgcgggcgaaggatctgaacgagatgttcccggtggccgacgcggaggcggcgccgacggcgaacccgcgggggttcgcgaacctgctgtggaagcagctcgaccacctcggcaacgccgggttcgacccggcgctgttccgcgtcgacgcctacggcaacgtgctctacctccacgccgactccgcctcgcctctcgcgtgggacatcgaccactggttcccctgcgcccgaggtgggaggacggtgccgagcaacctgaggatcgtgcaggcgcaggtgtgcaggaagaagcacaacaagctggagttcctcgtcccgtggtgggatctgcagctcggcatctccgtcaaccagttcctctccatcttcgcctccaagaacgccgacttcaggaacagagcattcacgttcttgttcgtcgacggggccagcgaggagctcacctcgatgcaggctgtggaggcgcacgcgtttccgcaccatttctccgatttgaccaagaaagttggccttgcccctgctgccattgtttcctccaggggatccgatagctcggtgctcaaatctcttgatgcaaaccggccgctcaggcctaattatcctctcattgctgccaagaaattcacgggagaaaaggatgagaattttaacgtgccaatgtccaaccatgggcctaattcgactaaggagaacaataatccggatgctgatggctacattagcaacccttacctgtccattgcaacggctagggactcgctgaggcaaagggaagaggccaagaagaagcaagctgagctcactgagctggagaacgaggccactgagctgaagcagaagaatgaagaggagcgggtggccatccaggacatggaggccctcctcatcaagaggcggcggcgcgtcgagaagtgccgccgcttggcggaggctcagtcgaattacaaggctgtgctggagaagatgatcagagacgccatgcaccagtctgttgtgtacaaggagcagcttaggatgaaccaagctgcaacgagcactctcatggcgagactcgaggcccagagagcaatgtgtgactcatccgaaaccgagctccggaggaagtaccagcagaaggatgaactggagaagcagatcaagcctttcaccgatcaagcaaggaagcggtatcgtgttgacgatgatggattgctagaggaaaggcacagcttagaagaaaggcacagtgaaagggtgaagtattttccaggaataagactgaggagcagaaaccctctcaagcaggagctgagggttttcctggaggaggaccagagggcttcagatgcatacatctccctagaggaagaggaaattgcaggtgaaacttcaacaatgggaaatttcaggaattcacctttcaaggtgataaacttcccaaggaggtccatggaagacaacacagttgacactgagagaggaagagcatcagtgagggagaagctggagcatctggcgatcaaagaacggcagcgcggcagaaggagagaaaggaccatgtcatcaaggggatcaagggcaactagcactcctgtgaggtcaagagatggcaatggcaagggcaaagcagccatggtgcaatgtgagtctgagactgaaagatctcagacagtttcagtgccaaggacatcctcagttcctccaagtcctccttacagagtaactggcatgtatggaacacctagatatcctgcagagaaatcggtgctattgaaaaagaataatgtgattcatcggcaaggcgtcggtcgatccgaaggcgacgcaaacatgaaccacaccggcaaaggaactgtggataagtggcttcaaatgctcatggaggatcagcagcagcaagaagatcctgcagcagcatatcattcttctgaagatcacaacactgctgatgaaatcgcttcagacgagcaccaaatgcaaagcagaattgatgatgagagctgcaggaatgagatcaccgaatgctccgatgagatcgtcgaggtcggtggcgatggtgctactgagcagcaggacaggtgcaggaacagctttgagatcaaggagaggggagaggagaagaagatctggttcccaaggtctgacagctccaggggtttcaggtctctgccttcctcaccttccaagatccttggaatgagaaggggtgtggagtgcatgagcaggaagcccaaggtggtcggcgacgacaatggcagatacggctatgaagattcagtgtccacaagcagcagcaagttcctcaccaggtgcaagcaagccatcaagaaagcagtgaacaaataa</cdnaseq>|
 
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AA = <aaseq>MAATAFTEEEKAVDDSLGYPKAYARLCRGGGGGGGGLPYGHGPP                    HGFLPYVLHPHEAMRAKDLNEMFPVADAEAAPTANPRGFANLLWKQLDHLGNAGFDPA                    LFRVDAYGNVLYLHADSASPLAWDIDHWFPCARGGRTVPSNLRIVQAQVCRKKHNKLE                    FLVPWWDLQLGISVNQFLSIFASKNADFRNRAFTFLFVDGASEELTSMQAVEAHAFPH                    HFSDLTKKVGLAPAAIVSSRGSDSSVLKSLDANRPLRPNYPLIAAKKFTGEKDENFNV                    PMSNHGPNSTKENNNPDADGYISNPYLSIATARDSLRQREEAKKKQAELTELENEATE                    LKQKNEEERVAIQDMEALLIKRRRRVEKCRRLAEAQSNYKAVLEKMIRDAMHQSVVYK                    EQLRMNQAATSTLMARLEAQRAMCDSSETELRRKYQQKDELEKQIKPFTDQARKRYRV                    DDDGLLEERHSLEERHSERVKYFPGIRLRSRNPLKQELRVFLEEDQRASDAYISLEEE                    EIAGETSTMGNFRNSPFKVINFPRRSMEDNTVDTERGRASVREKLEHLAIKERQRGRR                    RERTMSSRGSRATSTPVRSRDGNGKGKAAMVQCESETERSQTVSVPRTSSVPPSPPYR                    VTGMYGTPRYPAEKSVLLKKNNVIHRQGVGRSEGDANMNHTGKGTVDKWLQMLMEDQQ                    QQEDPAAAYHSSEDHNTADEIASDEHQMQSRIDDESCRNEITECSDEIVEVGGDGATE                    QQDRCRNSFEIKERGEEKKIWFPRSDSSRGFRSLPSSPSKILGMRRGVECMSRKPKVV                    GDDNGRYGYEDSVSTSSSKFLTRCKQAIKKAVNK</aaseq>|
 
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DNA = <dnaseqindica>1679..3017#1203..1578#890..1107#637..799#306..540#53..220#atttgccactgatcccgaaacaaacagttggcggcggcggcggcgcgaggcgatggcggcgacggcgttcacggaggaggagaaggcggtggatgactcgctcggctaccccaaggcctacgcgcgcctctgccgcggcggcggcggtggcggcggtggactcccgtacggccacggcccgccgcacggcttcctcccctacgtcctccacccgcacgaggtaatgggtgctcgtcgaggtgatggtcgcggctgctggtgcggtggtgagctgattggggtggttgtgttgggtggtggtgcaggcgatgcgggcgaaggatctgaacgagatgttcccggtggccgacgcggaggcggcgccgacggcgaacccgcgggggttcgcgaacctgctgtggaagcagctcgaccacctcggcaacgccgggttcgacccggcgctgttccgcgtcgacgcctacggcaacgtgctctacctccacgccgactccgcctcgcctctcgcgtgggacatcgaccactggttcccctgcgcccgtaagaaacgcagatcgaacgaactcatcccaacatccgcttccacatcattccttcgatctctaacgagattgttttttttgtatttgctcgcaggaggtgggaggacggtgccgagcaacctgaggatcgtgcaggcgcaggtgtgcaggaagaagcacaacaagctggagttcctcgtcccgtggtgggatctgcagctcggcatctccgtcaaccagttcctctccatcttcgcctccaagaacgccgacttcaggttcgcccatccgcatcgaacagcttaatgtgtctctgcgggtttttttttaccgatgcatcatggatcgaatccttctgagacttgcaggaacagagcattcacgttcttgttcgtcgacggggccagcgaggagctcacctcgatgcaggctgtggaggcgcacgcgtttccgcaccatttctccgatttgaccaagaaagttggccttgcccctgctgccattgtttcctccaggggatccgatagctcggtgctcaaatctcttgatgcaaaccggccgctcaggcctaattatcctctcattggtatgcgaaatacctatttttcgataatttgaaggatttgttgtgtttgtacatgaacttgtgctaaactaaatgttcactacctgtttctttagctgccaagaaattcacgggagaaaaggatgagaattttaacgtgccaatgtccaaccatgggcctaattcgactaaggagaacaataatccggatgctgatggctacattagcaacccttacctgtccattgcaacggctagggactcgctgaggcaaagggaagaggccaagaagaagcaagctgagctcactgagctggagaacgaggccactgagctgaagcagaagaatgaagaggagcgggtggccatccaggacatggaggccctcctcatcaagaggcggcggcgcgtcgagaagtgccgccgcttggcggaggctcagtcgaattacaaggctgtgctggagaagatgatcagagacgccatgcaccagtaaggatgaatctatgcagcaagagccaagaactctcatgcagttgatttcaatgtcgattgtttgtgctaattgttgattgtggtgcaaaatgtgcaggtctgttgtgtacaaggagcagcttaggatgaaccaagctgcaacgagcactctcatggcgagactcgaggcccagagagcaatgtgtgactcatccgaaaccgagctccggaggaagtaccagcagaaggatgaactggagaagcagatcaagcctttcaccgatcaagcaaggaagcggtatcgtgttgacgatgatggattgctagaggaaaggcacagcttagaagaaaggcacagtgaaagggtgaagtattttccaggaataagactgaggagcagaaaccctctcaagcaggagctgagggttttcctggaggaggaccagagggcttcagatgcatacatctccctagaggaagaggaaattgcaggtgaaacttcaacaatgggaaatttcaggaattcacctttcaaggtgataaacttcccaaggaggtccatggaagacaacacagttgacactgagagaggaagagcatcagtgagggagaagctggagcatctggcgatcaaagaacggcagcgcggcagaaggagagaaaggaccatgtcatcaaggggatcaagggcaactagcactcctgtgaggtcaagagatggcaatggcaagggcaaagcagccatggtgcaatgtgagtctgagactgaaagatctcagacagtttcagtgccaaggacatcctcagttcctccaagtcctccttacagagtaactggcatgtatggaacacctagatatcctgcagagaaatcggtgctattgaaaaagaataatgtgattcatcggcaaggcgtcggtcgatccgaaggcgacgcaaacatgaaccacaccggcaaaggaactgtggataagtggcttcaaatgctcatggaggatcagcagcagcaagaagatcctgcagcagcatatcattcttctgaagatcacaacactgctgatgaaatcgcttcagacgagcaccaaatgcaaagcagaattgatgatgagagctgcaggaatgagatcaccgaatgctccgatgagatcgtcgaggtcggtggcgatggtgctactgagcagcaggacaggtgcaggaacagctttgagatcaaggagaggggagaggagaagaagatctggttcccaaggtctgacagctccaggggtttcaggtctctgccttcctcaccttccaagatccttggaatgagaaggggtgtggagtgcatgagcaggaagcccaaggtggtcggcgacgacaatggcagatacggctatgaagattcagtgtccacaagcagcagcaagttcctcaccaggtgcaagcaagccatcaagaaagcagtgaacaaataaacaattctttgcaccatgatgcagcacatttcaacctgtttattcttcaaatctgtgtgtttaaattcgtgtcaaattgctagttttgttttctgtagctgaataagttagtactcaagtgaggcatacatagctttgcagagttccttctgcaactagtgagacagacatttactgttcatggtcactattatgtgatcatactggcgttgtacaactatttgttgatttatttatgaagagaaactaaattctt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001048717.1 RefSeq:Os01g0176500]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 04:34, 14 May 2015

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Structured Information