|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0218800|
| |
| − | Description = Similar to Trithorax 5 (Fragment)|
| |
| − | Version = NM_001048949.1 GI:115435311 GeneID:4324588|
| |
| − | Length = 7273 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0218800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:6506348..6513620|
| |
| − | CDS = 6506680..6506770,6506899..6506999,6507090..6507164,6507339..6507425,6507573..6507662<br>,6507739..6507795,6507886..6507972,6508565..6508763,6509093..6509157<br>,6509482..6509586,6509706..6509851,6510080..6510204,6510315..6510417<br>,6510501..6510576,6510714..6510849,6511278..6511367,6511464..6511558<br>,6511678..6511743,6511848..6511916,6512014..6512127,6512221..6512428<br>,6512525..6512580,6512798..6513532|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:6506348..6513620
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:6506348..6513620
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgctcgcgtcccgcatcccgctcaagcgctgcaccgccgccgccgtcgtccccctccccggggagttggagatggaggaggggcccaccccccccgccgggggtggtgaggggagcggcgcggcggtggtgcccgccaagcgccgccgcgagcgggtggtcccctcgcggtttagggactcggtggtgtcgctgccgctgccgcccgcgaagaaggggaggcccgcgaagaaggcggccgcgcgggagggcggggacggggaggtgtacgatgtggaggtgcgcgcggtggagcaacaaggcgcgacggcggcggccttcggcgccgtggagaccgcggtgtggcccggcgacgagcggccggcgcagacggaggaggagctgtaccgggcgtgcaggaatatccgcaggagcagcagctccagcgggttcagcggcagcgtggtgacgtcgctgagcaatgccggcgggagcgtggcgccggaggggaagcccgtggtggtggtggagtgcaagccgaagagggagggcggcgataaaaaggaggatttttactggccggaggatttcgtgctgggtgatgtcgtgtgggcgaggtccgggaagaagtgcccagcatggcctgcggtggtgattgacccactgctccacgcgccagcggtcgtgttgaactcctgcatcccgggtgcactctgcgtcatgttctttggattctcttctggcgggcatggcagggactatggatggattaagcaagggatgatctttccatttgtggactacttagaccggtttcagggtcaggctttgtataaactcaaggcaaacagattccgtcaagcaattgaggaggctttccttgctgagcgtgggttttgtgagctcgaaatggatgaggggtgctcactagagaagtctgtcaatgaccagtctgtccctgacgggttacaggaagggagtggttctaacaatgaccaggaatgtcaatcggaggctcaggttgttggcaaatcaactggatgttgtgatagttgtggtaatcgtgttccacccaagatcgcgaagaaaaagaagcaagcgggagagcagttactctgtagacactgtgataagctattgcagtcaaagcagtactgtggcatatgcaagaaaatctggcaccacacagatggtggaaattgggtttgttgtgatgagtgtcaaatttgggttcacgtagaatgtgacctaacatgcatcaacatggaggacttagaaaatgccgattacttctgtccagattgcaaatcaaaacgcaagacagtacctcctgttgaacaaatgaacactccgaacagttcagaatgtgctagcacttctaaggaaaaactgccggaaatgatacctgtgttctgctttgggatggacggaatgtatttacctaagaagcacatgatactatgccaatgtaattcttgcaaagaaaggctgatgagtctgagtgagtgggagagacatactggttcaaggaagaagaactggaagatgagcgttaaacttaagagcaatggggatccattggtaaccttgttggatgatattccctgcgcaaatgtgaagtcttctacaccaagtattaataaagaagagttgctgaaattgctagcaaattcttttagacctgtcaatgctagatggacaactgaacgttgtgctgtttgtcgatgggttgaggattgggactacaataaaattattatttgcaacagatgccaaatagctgtccaccaagagtgctatggagcacgtgatgtacaagattttacaaattgggtctgtcgagcatgtgaattgccgaaacaaaaaagagaatgttgtctttgtcctgtcaaaggcggtgctctcaagccaacagatattgaccaactatgggttcatgttacatgtgcctggtttcaacctaaagtctcttttcctgttgatgagacaatggagccagccatgggcatattgagcatcccttcagagtactttaagaaggcatgtgttatatgcaagcagatgcatggtgcctgcactcagtgctacaagtgctctacttattatcatgcaatgtgtgcatcaagagcaggatatcgcatggagttgcaatactctgaaaaaaatggaaggaacataacaagaatggtttcctactgtgcatttcacagtactcctgacccagataatgtcttgatagttaagacgcctgaaggagttttctcaaccaaatttttgccccaaaataatgagaaacagagtggtacaagacttgtcaggaaagagaatctacaggagaaagtccttcctgctaaaatttctgactgtccagctgcaaggtgcctaccttatgaaatgctgaaaaataagaaagaaccaggagaggcaattgcccacagaataatgggaccccgacatcattcccaagagtcaattgagggtttgaacgcttgcatggatcaaaaggatgaaaaatccttcgcaacttttagagaacgacttcggtatttacagaaaatagaaaacaaaagggtctcttgtggtcgatctggaatacatggatggggactctttgctgctaagaaaatccaggaggggcaaatggttatcgaatatcgcggtgaccaagttagacgtagtgttgcagatttgagggaagcacgatatcacagggagaagaaagattgttatctgttcaagatcagcgaagacgttgtcgttgatgcaacagagaaagggaacatagcccgcctaattaatcactcgtgtatgcctaattgctacgcaaggatcatgagtgttggcgatgaaaagagccagataattcttatcgccaaaagagacgtctccgctggcgaagaactaacctatgactacttgtttgaccctgacgagtccgaggactgcagggtcccttgtctgtgtaaagctcttaactgccgtggatacatgaactga</cdnaseq>|
| |
| − | AA = <aaseq>MLASRIPLKRCTAAAVVPLPGELEMEEGPTPPAGGGEGSGAAVV PAKRRRERVVPSRFRDSVVSLPLPPAKKGRPAKKAAAREGGDGEVYDVEVRAVEQQGA TAAAFGAVETAVWPGDERPAQTEEELYRACRNIRRSSSSSGFSGSVVTSLSNAGGSVA PEGKPVVVVECKPKREGGDKKEDFYWPEDFVLGDVVWARSGKKCPAWPAVVIDPLLHA PAVVLNSCIPGALCVMFFGFSSGGHGRDYGWIKQGMIFPFVDYLDRFQGQALYKLKAN RFRQAIEEAFLAERGFCELEMDEGCSLEKSVNDQSVPDGLQEGSGSNNDQECQSEAQV VGKSTGCCDSCGNRVPPKIAKKKKQAGEQLLCRHCDKLLQSKQYCGICKKIWHHTDGG NWVCCDECQIWVHVECDLTCINMEDLENADYFCPDCKSKRKTVPPVEQMNTPNSSECA STSKEKLPEMIPVFCFGMDGMYLPKKHMILCQCNSCKERLMSLSEWERHTGSRKKNWK MSVKLKSNGDPLVTLLDDIPCANVKSSTPSINKEELLKLLANSFRPVNARWTTERCAV CRWVEDWDYNKIIICNRCQIAVHQECYGARDVQDFTNWVCRACELPKQKRECCLCPVK GGALKPTDIDQLWVHVTCAWFQPKVSFPVDETMEPAMGILSIPSEYFKKACVICKQMH GACTQCYKCSTYYHAMCASRAGYRMELQYSEKNGRNITRMVSYCAFHSTPDPDNVLIV KTPEGVFSTKFLPQNNEKQSGTRLVRKENLQEKVLPAKISDCPAARCLPYEMLKNKKE PGEAIAHRIMGPRHHSQESIEGLNACMDQKDEKSFATFRERLRYLQKIENKRVSCGRS GIHGWGLFAAKKIQEGQMVIEYRGDQVRRSVADLREARYHREKKDCYLFKISEDVVVD ATEKGNIARLINHSCMPNCYARIMSVGDEKSQIILIAKRDVSAGEELTYDYLFDPDES EDCRVPCLCKALNCRGYMN</aaseq>|
| |
| − | DNA = <dnaseqindica>6851..6941#6622..6722#6457..6531#6196..6282#5959..6048#5826..5882#5649..5735#4858..5056#4464..4528#4035..4139#3770..3915#3417..3541#3204..3306#3045..3120#2772..2907#2254..2343#2063..2157#1878..1943#1705..1773#1494..1607#1193..1400#1041..1096#89..823#gaaccctaacacgcggaggatttggccaccgacgagttggggggaggaagggagttcaattctagggttttgtttcggcgcggcggggatgctcgcgtcccgcatcccgctcaagcgctgcaccgccgccgccgtcgtccccctccccggggagttggagatggaggaggggcccaccccccccgccgggggtggtgaggggagcggcgcggcggtggtgcccgccaagcgccgccgcgagcgggtggtcccctcgcggtttagggactcggtggtgtcgctgccgctgccgcccgcgaagaaggggaggcccgcgaagaaggcggccgcgcgggagggcggggacggggaggtgtacgatgtggaggtgcgcgcggtggagcaacaaggcgcgacggcggcggccttcggcgccgtggagaccgcggtgtggcccggcgacgagcggccggcgcagacggaggaggagctgtaccgggcgtgcaggaatatccgcaggagcagcagctccagcgggttcagcggcagcgtggtgacgtcgctgagcaatgccggcgggagcgtggcgccggaggggaagcccgtggtggtggtggagtgcaagccgaagagggagggcggcgataaaaaggaggatttttactggccggaggatttcgtgctgggtgatgtcgtgtgggcgaggtccgggaagaagtgcccagcatggcctgcggtggtgattgacccactgctccacgcgccagcggtcgtgttgaactcctgcatcccgggtgcactctgcgtcatgttctttggattctcttctggcgggcatggcagggtaagctttgtggggtgttggtttttgttttgtccttgaaatccacaacccaacatttaaatgtgattttttttttgaatttaaatgtggaataagagttccacgaagtgcaactgaaacagggtaaaccatgtgtcgcatgggccaaacagtccctttctgtttttttttttttggtttgcgtcaacttacagtactgtatttctttgcatcgcaggactatggatggattaagcaagggatgatctttccatttgtggactacttagaccggtaagctactggcatacgttcgtttttttttaaaaaaaatgctgctatggggatttatttacctgcgtgctatctgaaatttctttggtctcccaggtttcagggtcaggctttgtataaactcaaggcaaacagattccgtcaagcaattgaggaggctttccttgctgagcgtgggttttgtgagctcgaaatggatgaggggtgctcactagagaagtctgtcaatgaccagtctgtccctgacgggttacaggaagggagtggttctaacaatgaccaggaatgtcaatcggaggctcaggtaagttccggatgcatcacaaatgtaaagatatgagcttgtgactgccttattacaactttcagctgagccgcaatctaatcaacactgcaggttgttggcaaatcaactggatgttgtgatagttgtggtaatcgtgttccacccaagatcgcgaagaaaaagaagcaagcgggagagcagttactctgtagacactgtgataaggtatgcggccgtacatttgagatgggtttttgtgtgttccattactgttttctgtttttatggtgccttatgtgtgcaaattttattatatctgcagctattgcagtcaaagcagtactgtggcatatgcaagaaaatctggcaccacacagatggtggaaattgggtaagagcttagaaatatatgtgtttcgtcgctgttatattctacatgttctcttgatttgtccatgggtcaaggctcacaacctgcaacacccttctttgcaggtttgttgtgatgagtgtcaaatttgggttcacgtagaatgtgacctaacatgcatcaacatggaggtaatctgcttcttttgttttgatgtttatattttttatcctattgtttgacacagatatcgaacagttctacgaataataactgtatataatttgctgactccagtactgttttataggacttagaaaatgccgattacttctgtccagattgcaaatcaaaacgcaagacagtacctcctgttgaacaaatgaacactccgaacagttcagagtgagttatttaattttttcatccaacctattgacttctatttaacgttactcaaatgattataagcatgccactttctaatgtatctatacacagatgtgctagcacttctaaggaaaaactgccggaaatgatacctgtgttctgctttgggatggacggaatgtatttacctaagaagcacatgtatgtattctgcatatcttctatttaatctacagccagcatgcttctttaagcttattacatggatatcaatactctttaagtgattttagcgtgttttatttctcaatcccccatatcatgtagagtcatatgttctttgaaggactactagatttaggtgataggttattttcctaggggcatatatttctcttttgtttcattcatctggcatgaaaattgacacttaaccaatttagccatattggatattttgtgccacaaggcttagaaggctcaataagaaaaacaacatttgaaaggtcgattgttcaatattaaagaaattcatgtattcctttctttctaaaggactataaactgatttcctgatgtggctgtggctggtgcaactgttggtattgactttgtattgttattggcaggatactatgccaatgtaattcttgcaaagaaaggctgatgagtctgagtgagtgggagagacatactggttcaaggaagaagaactggaagatgagcgttaaacttaagagcaatggggatccattggtaaccttggtaagcctttaagatcttcatttatctgaaagttggtggtctataatgatcgctaaacttgaattcacctagttttcaataaaattcaaaggtatgagaacttgatatgacttctttcatgtttgtctgaccttcagttggatgatattccctgcgcaaatgtgaagtcttctacaccaagtattaataaagaagagttgctgaaattgctaggtacattggctcttgagtttatgttggtttctgcagttggtgtgtgcaacttgtttcacaacaaatgaatttgatgcttgcagcaaattcttttagacctgtcaatgctagatggacaactgaacgttgtgctgtttgtcgatgggttgaggattgggactacaataaaattattatttgcaacaggtatttcctgctaatctttgaggtttttttgacacccttagtttatggattcattatatgttttaggactgcgtgtagctgaaaaacttgtccaaaatctttatgtgcagatgccaaatagctgtccaccaagagtgctatggagcacgtgatgtacaagattttacaaattgggtctgtcgagcatgtgaattgccgaaacaaaaaagagaatgttgtctttgtcctgtcaaaggtatcattcctgccatgatgttgtatgtcatcacagtattgaatgatactgatacctcacatttttttctgaggctttccagtgttccttatattatgtttatatgatgtaccccatttgattaaattgcagtggtgcttggtgtccatttttcctagtcttggttcgctgcattatattattttttaatgctatcagtattcaccttttcttttttaattgctttaggcggtgctctcaagccaacagatattgaccaactatgggttcatgttacatgtgcctggtttcaacctaaagtctcttttcctgttgatgagacaatggagccagccatgggcatattgagcatcccttcagagtactttaagaaggttaagatttctcattgttattttgtatataatgttatgcattggatatttattgtctgtttatttgttgaattcctgtcgtgatgtttatttacactatgttgtcatatgaattccaggcatgtgttatatgcaagcagatgcatggtgcctgcactcagtgctacaagtgctctacttattatcatgcaatgtgtgcatcaagagcaggatatcgcatggaggtagactgtgggaacccttttcttgcttaaataaaaaataaattcattttgtgacttacgagtcttatgatgcttgtctgggagagttttgtgcacttgtactcgcccgcttggtttttgaattgattctgtgtactgttgctttgaagagcgcaagccttatgcttcatttttccatataagctattccattgaagcgtgacctgtacatttgtttaaaatttattctgtatcatttgatgttaatttattagtcaattgtttcttcattaatgcacagctggatacagtttatcataatcgatgtttttctgttgcttgtagttgcaatactctgaaaaaaatggaaggaacataacaagaatggtttcctactgtgcatttcacaggtaattttttttcaccttactgtctcaccctctgttcaaatatatatcaattcatcaaattgtttccattaaaaataatagttccaatataggctcatgagtcatgactcttattttccagaccttgttctttctttttgttgttcatcttagtagcatagcgatacattcttttttgagcaaaatcaatagtaatctgatgcattaaattgacaagatattggaacagttctgttgtctcagttatttgtgggagtggcaattctaccttaaaggattaagtggcacaaattcgtgttacttacacctgttctactgaccctttgcagtactcctgacccagataatgtcttgatagttaagacgcctgaaggagttttctcaaccaaatttttgccccaaaataatgagaaacagagtggtacaagacttgtcaggaaagagaatctacaggagaaagtccttcctgctaaaatttctgactgtccagctgcaaggtgcctaccttatgaaatgctgaaaaataaggtattttatgacgcccctattctgttttgttctgttgctcctcccaacagtagcagagccaggaattttaccctgtggggtcaaataccattgcattatattttagtgggggtcatttttgtaaatttcaatggacttatatgtaaaaaaatgagactcacaatggtatttgcaaaaaaagctgtggcgtcagctgacaatacatggctccgtcactgcctcccaatacaataaaagatatagttaattggcagggataattcacgaatttgttacactgtccactttcattttgtaattctttgtagcccatcctttagactttttatgttctttctccttttggtagtttcctttttagtttatgtaaaattcttagttcatccaagcaatttagattcttgtctgcatgggtttctcatgctgtaatctatccttggttttgcatgttcaaaggatgggactcttagtggcagttatatacagttcttttggaataataggatgtctatcatatggatgaatatggatctgcctaggttttgtttctgttataagctagctctagcactaaattttctgcatgttccagaaagaaccaggagaggcaattgcccacagaataatgggaccccgacatcattcccaagagtcaattgagggtttgaacgcttgcatggtaactatcccattctaactactgtattgtctttcttccagcaaccattgaatgcgagaacttatgcatcttacccccacttgttaacaggatcaaaaggatgaaaaatccttcgcaacttttagagaacgacttcggtatttacaggtttagtttctgacggattgttctttttaatatttgatttcagcatactgatacactaaatgtttgatgatttcagaaaatagaaaacaaaagggtctcttgtggtcgatctggaatacatggatggggactctttgctgctaagaaaatccaggaggggcaaatggtatgccatttaagttatatgcattttttccaataaaacccaatagtttatcatggtaaatagttagcattccagttctgttgtttgttgtgcatccaaatactaggagcctgttcttaacatgtcaatggaccacttttgtgctaggttatcgaatatcgcggtgaccaagttagacgtagtgttgcagatttgagggaagcacgatatcacagggagaagaaagattgttatgtaagttgttcactgtgttattttgtggaggtcatctgttctacttttgacttgaattatttaggcagttctacctgtgaataatgcaatgatttccagataggtcactgatctactggaaataccacatcttaactatgtgtgatggtgatgattctttcttttgcactgcagctgttcaagatcagcgaagacgttgtcgttgatgcaacagagaaagggaacatagcccgcctaattaatcactcggtaatactttgggtttcccatttgcatcttctctctaccttaatagcccaacaaaatataacagctaaacattatcgtcatcgctttcagtgtatgcctaattgctacgcaaggatcatgagtgttggcgatgaaaagagccagataattcttatcgccaaaagagacgtctccgctggcgaagaactaacgtaatttgctccttaccctgccctgtcctgatgccccttttataccttgagagtacagctaactgtctccattcctgaagctatggatctctacaattttctgatccgtctctccctcttgtgtgcagctatgactacttgtttgaccctgacgagtccgaggactgcagggtcccttgtctgtgtaaagctcttaactgccgtggatacatgaactgaagtgaacattctcacaagtcacaaggctaaccccccttaaccatgccaaagggctatattctcagattcatcatgattctttcgtttattcaaaggctggttgtcaaacaagcatcaaagtttgtgatttttttacacaaattttgctagatagcgaggctggattggatttaccggtttcagactttcggtgagagcatagcaggcacctggcaatttagcaacacgctgccagagccccttgtaaattcttcttactttgatgtaataataagatgattaagttgttaatgccttttctccatgatgaaaagaaagagaaatgaatatcc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001048949.1 RefSeq:Os01g0218800]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
