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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0229200|
| |
| − | Description = VHS domain containing protein|
| |
| − | Version = NM_001049019.1 GI:115435451 GeneID:4325877|
| |
| − | Length = 8092 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0229200, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:7128216..7136307|
| |
| − | CDS = 7128377..7128477,7129924..7130002,7130450..7130548,7130634..7130747,7130940..7131082<br>,7131696..7131777,7132405..7132490,7132859..7133092,7134664..7135142<br>,7135289..7136007|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:7128216..7136307
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:7128216..7136307
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgggctccatggtggaccgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgacatctgcaaccgcgaccccgggcaatcaaaagatgttgttaaggcactcaagaaaaggattgggcacaaaaatccaaaagtccaaattcttgcgctgactctcttggaaactgcaatcaagaactgtggggatatattccacatgcatgttgcagaaagagatgtgttgcatgagatggtgaagatagtgaagaaaaagtctgatcagaatgtcaaagagaaggtattaactatgatagatacatggcaagaagcattcgggggaccacgtgcaagatatccacagtactatgcagcgtaccatgacttggtgcgtgctggagctgcatttccaaagagatctgatcgacctgcaccattgtttaatggccagtctccagcaggcagaaatatgcgtagtcctgatcagcaggatgaagctgaatcgtctgctggaaatgattttcctgctttgagcatgtcagagattcagaatgctcgtggtataatggatgtgctagccgagatgctaaatgctttagaccctggaaacagagagggactaaggcaggaggtaattgtggagcttgttgatcagtgtcgcacttacaagcagagagtggtactactagttaatgctaccgcggatgaggaacttatgtcacaagggcttgcactgaatgatgacttgcaacgtgttctcgcaaaacacgatgcaattgctgcaggcattgcagttcgagtggagaagaaacctaagtctctgcaggcacttgtagacactgaggattctatgaaccaagactctaagaaagagcaggcacttgtagatattgaggatcctacaacccaagagactaataaagaaccaagccaaagtgccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgtcaaatggctcagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctgggatgacaacccatctacaacagaaaattcactagcgcttgtcccagttactgatccagtagttgattctactccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaacacaaccaataacattgccaaacctgcggatccctttggtgttaattctagctctactcttcctggatcacagccatacaatgctccaacccagcatcctctgcaagcacagcagcagcctcagcaggtgggcctctatcctaatgggggagctgtgaaccctggaacatcataccccacaagttctgggtggaatggtcaaattgcgaacaatgcgacgcctccagcgcagcaaacagtgaattatgatgagcaaagtggagcccttcccccacctccttgggaagctcagtcagcgccaagcggcgacatgtcaaatggcggtatgcagtctcacccggtgtcaaacggccaatttggaggtatgccatctctcccaacaccatcaaaccagatgggtgggatgcagcccttgcacccgcagatgaaccagatgggaggtccacaagcccaccaaatgtacaacaaccaacaaccgggagccatgcaacccagccaacctgctgtaacccagatgcaatcaggctttgcgaaccaattcggttcgatgccaccacactccatgccaggaatgcaattccccgggatgcaaccttcgccgatgccaggagcgcagccagtcatgatgtatgcgcaaccgatgatgatgccgggtatgcagtttgcagccatgccgcaaccacgaatgtatggcccccagatgtcccagtaccggcttgtgcagcagcaagcggcacaatactacagcaacagccaagggaggccaacatactacgctggtatgaatgacctctcccagaaaatgtatggcctctccatgcaagacagctcttacatggggatgaacagctcgccctactctacaacaccttcatcatcatcttccatggggcaaccatcgaagcctgaggacaagctgtttggagatcttcttagcattgccaaaacaaagcagaacaaggcttaa</cdnaseq>|
| |
| − | AA = <aaseq>MAGSMVDRATSDMLIGPDWAKNMEICDICNRDPGQSKDVVKALK KRIGHKNPKVQILALTLLETAIKNCGDIFHMHVAERDVLHEMVKIVKKKSDQNVKEKV LTMIDTWQEAFGGPRARYPQYYAAYHDLVRAGAAFPKRSDRPAPLFNGQSPAGRNMRS PDQQDEAESSAGNDFPALSMSEIQNARGIMDVLAEMLNALDPGNREGLRQEVIVELVD QCRTYKQRVVLLVNATADEELMSQGLALNDDLQRVLAKHDAIAAGIAVRVEKKPKSLQ ALVDTEDSMNQDSKKEQALVDIEDPTTQETNKEPSQSASVQSPFEQLALPAPPVSNGS ATPAPKSDLGVDLLSWDDNPSTTENSLALVPVTDPVVDSTPSQNALAIVDIFSQNNTT NNIAKPADPFGVNSSSTLPGSQPYNAPTQHPLQAQQQPQQVGLYPNGGAVNPGTSYPT SSGWNGQIANNATPPAQQTVNYDEQSGALPPPPWEAQSAPSGDMSNGGMQSHPVSNGQ FGGMPSLPTPSNQMGGMQPLHPQMNQMGGPQAHQMYNNQQPGAMQPSQPAVTQMQSGF ANQFGSMPPHSMPGMQFPGMQPSPMPGAQPVMMYAQPMMMPGMQFAAMPQPRMYGPQM SQYRLVQQQAAQYYSNSQGRPTYYAGMNDLSQKMYGLSMQDSSYMGMNSSPYSTTPSS SSSMGQPSKPEDKLFGDLLSIAKTKQNKA</aaseq>|
| |
| − | DNA = <dnaseqindica>162..262#1709..1787#2235..2333#2419..2532#2725..2867#3481..3562#4190..4275#4644..4877#6449..6927#7074..7792#ggaggccaatccgctcgctcgctcgctcgccggcgacccgaatccggccaggagggggggcggctggccggagctagggtgggtgggtggttggccgcaccaccttcctccgcgccgccggagcgtgggcagcggcggcggccggtgggaggaggggaagcatggcgggctccatggtggaccgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgacatctgcaaccgcgaccccgggtacgtgtgctcctcttgatcccgtggcggtggcgggctgcctgatcttgatccgcggcgagcggtggtggtggtggtggtggtgtggtttctcgttgggatgatggggcacagcggcgcgggaattggatccttctattctgaaaattagaatgcgattggggggtggtgggtgaatgaatgctagtgctagatgggaggaggagatcaggatttgcggtggcggtggatctggctccgctcgcatcctggttcgccatgaggtctttgattgtgaggaggaagttttggaaatggctagatagaattgctggggattggtgcttgctttgccgttcaattggcttatttggtgaggtgacaagatgatacgctgcagttagatcgcaagagcgtggtggtattcatggattcactggcaaattgctagtggaaccaaccgtaaccgaggagaaaatacgagctaccatatggaataatattgctttcataaacaattttcagtaacctgtgagtttcataacttacgaggtgttcctagtgacacacatactagtagagagagaaaaaaaaagaaactgcagataatatagcaacctaggatggttcgtactccctccatcccacaatatagcaaggtagtagatattattgtgagaaggttgaaaaatagaaatgatgaatgtttgctcgccactgcaacttgactgttttcttcaaacaaatgacaactagcccatttgactcgggatgcagtttgtcagctgctgtaaaaattaggttagcttacattaatcctactaagattagtttagcccaatttttgtgcttggcagctaacaacattaatcaaaattagtgattagatagaggaggaggaggttagctggagagaaaatagaactcagggggttagttaagtgtctccaagattatttggttgtttaaacggctaccccatttattaaccttaaaacctaacaagcacagctttaggataaactgtgaagcattaattgcatattagagtacctttaattccttatcgtaaggcagctacttgagtgctgcttcatgattcacctgcatgcttttaaactagtatttctgtactgctgctgcaacgtatgatctttattagttgaatacttagcatacagctactaacggtagtcattagttgttacaacttacaactaagttagtggtggaggccaccaaaagtttgatgcagttgggctgtttaatgtgtctgctggttttgatgaggcaatgattctgttcctgtctagaggttttatagtttgccttgattcatggtcggttattgtgattggaaaccaaatggttgaggttgactctgaagatgaatatttattgtattgtaaataatttctttcgttttggttcgtcaattattgatgagcaaacatttgtcatgtacaggcaatcaaaagatgttgttaaggcactcaagaaaaggattgggcacaaaaatccaaaagtccaaattcttgcgctgactgtgagtttatcataactttacatcctttttaagagtggtgctaatggtacaagcaatgggaagaatctcttctctgtgtgttttaacatcaagcatatatgtctattgctcagctatatttgtgtgtttattttgttcactaagcactactgttccagtctgtattaatattattgtccaatatttcatgaacatgtgttaatgtaatgatcagttgcaaccatgcaacctgaagcatcattagcacaaaggaacatcatttcataataaacatgtgtgtattaattccttgtccagtccacgaaggtgggagggagatttgatgaggatacaacttattttacttatgcttcattattattttggagatgtatcttgtttaggacaacttgcacaggatctaaaatgaataatatcctgattttttttgggggagctctgtttcagctcttggaaactgcaatcaagaactgtggggatatattccacatgcatgttgcagaaagagatgtgttgcatgagatggtgaagatagtgaagaaaaaggtttgatatgctccatagttttgatctcaagctgttttgttttaatgtcctgaatatgatggcatatgttcttgtcctattacagtctgatcagaatgtcaaagagaaggtattaactatgatagatacatggcaagaagcattcgggggaccacgtgcaagatatccacagtactatgcagcgtaccatgacttggtggtatggttttgaatcccagattggtttatcaagctctgaagttttttcccacactgaattttccatattcagaagtcgttgcattgtttgatcatgtgattaattggttactgatctatctatatttgttagaattaagggggaattcaccttgctgtttgacatagctatcctcctatttcactattgcagcgtgctggagctgcatttccaaagagatctgatcgacctgcaccattgtttaatggccagtctccagcaggcagaaatatgcgtagtcctgatcagcaggatgaagctgaatcgtctgctggaaatgattttcctgctttgaggtgtgctttcatacttttcattttctgatttgataatatcttttcctatatgttctctttactggtttgagattatcacatgaacatgtggaaaactataactattagaagatcactattcactagtcggtacctcctgctgatctgtttagcaaagttgtgtgtaaagtgctatgacaatactagcgtagtacctaactacctgtgaatttcaatggatctcaaataaatatactataaattctaaacttaaaacaaataaatacgccctaaaagaattgcatacagaattcacatcacatcaattgacaccttatacgcacatgtgctgtgcagaggatgtaatcctttatagaagatattacaaataatttgaaaatgtttgtgtaaacccatccacaaaagaatccttgaaagaagggggatagatgaagaacttcatcacaaccaccaagtcactaattcctttggagtaaagttttttttttttccgtctccagtgagaacctttgaataactcatctacttcaccttgctttgcctgctgtttctctaaccttatattctttttctgtcatttgaagtaaaactgaatgtatgcttatattttcagcatgtcagagattcagaatgctcgtggtataatggatgtgctagccgagatgctaaatgctttagaccctggaaacagagaggtaccgataacacttaccttgcttttaaactcaagctgcacaaaaaaaaagcacatctaaatgttagtgtcacaaatacctgttaaagaaaacaatccatcttgttttattttgagaaataactcctgatcttttaatttgagaaatggtcttgttctaaccacataaaacttactatgctgtggagcgtgtttttgcccttacttgcttatgttctataaacatttgagtatatgacacgtcagcctgtagtctatcaaatgttcattgattccaagcagcattacttgaaataccatttgcctggttgccgtgtaccctatattgttatgaaatctatttggtatggtaactaaggtatcgaagcatgaacatggtataccattgttttcatgcttttgataacattcgtatgtgggtttggacacccatatttaaaaatcttagaataaaggagtactccattatattttaaaatccatttattgtggaagaataaacagaagtctaaatggaattttaattcgaggttcaaatctgtacttatatgttccatacttagttacttaacaacctccttttgtgttaggtttactgattttgtttgtctgactactctgtacacagggactaaggcaggaggtaattgtggagcttgttgatcagtgtcgcacttacaagcagagagtggtactactagttaatgctaccgcgtgagtaaatctaatatttggtgaatatagtttttacttctaagatatggatgaagttgactgactgaacttccttgacaaccctggattatgggcatgtgtctgagtagaggatggtaaaaaggatggtctttgtcatttttgtgaattaatctctataacatttcctcctgtgtgagatataatgttatgctcaagaagagctgatcataagaattatcttatcatcttataaagcatttggatccaaatataaaatattcactcatgaaaagctggcaaaagtagcccttggctggcatctgtattatctcatttaactatttattgcaacatatatactaaaattctggtttggccatttacagggatgaggaacttatgtcacaagggcttgcactgaatgatgacttgcaacgtgttctcgcaaaacacgatgcaattgctgcaggcattgcagttcgagtggagaagaaacctaagtctctgcaggcacttgtagacactgaggattctatgaaccaagactctaagaaagagcaggcacttgtagatattgaggatcctacaacccaagagactaataaagaaccaagccaaaggttataatcttctcctgtcacatttgcatatttcttatttctaggtaatattgaatgatatcagcccatgtgcgtgcgatttttgtgcataaatgctggaaacaatttttttattagtaattagccattattctttattaacaagtgcttaaacactgtaatatagttcttcagttttggtgatgtacaattgtaccatccaccatgtttctgtgggtatttcaggcttctccttttccattgcagagttctattcttctaaactgctaattatacttggtctaaagaacaaacaagtttgtacattgtaattgatcaatacagtttctgctattggcagcaatttgcccagtgtagtgtagctgtttaggcttgtgaacatatgcacttccagacaacatgttgtcatgtgtataaaatttcctatttatgttcctgataaagccagtatcataaacaccgattaaaatccaaaaagtcatcaccattgctgcttacctccacatatgtacatatattttttgtttatgaacacccctacaagtctgatagtcaatgcatttatacccttgacaagtacttcctccgttacatattataagactttctagcattgctcacattcatatatgttaatgaatctagacatatatgtgtgcctagattcattaacatctatatgaatgtgcgcaatgctagaaagttttataacctgaaacggagatagtactttttttttgtttttatcaacacccctgcaatccattttatcatcaaattataccctggggctaaatttttctcatcttctcactactttctcttgtttaatcataaaaggtcagtggctatatggaagcccaatggcatctacaaatgctagtgacccaaaccactgaacaatcacacccatggctccctttctgcacagtactagtatatcaaaattattaggacatgttggagggtaggtccatatgccagcctatttgcatatgtacatcttatacatggtagccactgtttgcatatgaggagccttggcctgtgactactgactcctcatggtaatcactgtgactactgattggggcccttaactgctacctggtgtggtatcagtttttgttttctacactaaatctacaatccgactgttcttattttacttgaattggtggtattggaaatcgtagtgctgtcttttacaaatttgttgaatatccgttttctgtaacttatggtagagggtgttttggtagcaaacagagcaaactgtggctctcagctctgtaaggtattgtagaactaaaaagatagttgttgagagaaagcacgtaggtagaaccttctctctctaaaataaagataaatgtgcatttcttgaacctagccaaattttatgatccaaactgcatttagtgttgatttgtttgtttctcttggctttcatagtatcactagaccatagtgatgatctatattcgtaactttttttttttgattatttatcatgttttacctggcttctttaataacatctgtttgcatgtgacctgcctttgtaacagtgccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgtcaaatggctcagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctgggatgacaacccatctacaacagaaaattcactagcgcttgtcccagttactgatccagtagttgattctactccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaacacaaccaataacattgccaaacctgcggatccctttggtgttaattctagctctactcttcctggatcacagccatacaatgctccaacccagcatcctctgcaagcacagcagcagcctcagcaggtgggcctctatcctaatgggggagctgtgaaccctggaacatcataccccacaagttctgggtggaatggtcaaattgcgaacaatgcgacgcctccagcgcagcaaacagtgaattatggtattgcaatttatttatacatttacatttctcaacctttttcctacaccatcatccctatcattggatgtcagaaccacgcatgtccatgcttgtgttctgtttgagctttgaagaaattctgatgggtctcctgaattttgtagatgagcaaagtggagcccttcccccacctccttgggaagctcagtcagcgccaagcggcgacatgtcaaatggcggtatgcagtctcacccggtgtcaaacggccaatttggaggtatgccatctctcccaacaccatcaaaccagatgggtgggatgcagcccttgcacccgcagatgaaccagatgggaggtccacaagcccaccaaatgtacaacaaccaacaaccgggagccatgcaacccagccaacctgctgtaacccagatgcaatcaggctttgcgaaccaattcggttcgatgccaccacactccatgccaggaatgcaattccccgggatgcaaccttcgccgatgccaggagcgcagccagtcatgatgtatgcgcaaccgatgatgatgccgggtatgcagtttgcagccatgccgcaaccacgaatgtatggcccccagatgtcccagtaccggcttgtgcagcagcaagcggcacaatactacagcaacagccaagggaggccaacatactacgctggtatgaatgacctctcccagaaaatgtatggcctctccatgcaagacagctcttacatggggatgaacagctcgccctactctacaacaccttcatcatcatcttccatggggcaaccatcgaagcctgaggacaagctgtttggagatcttcttagcattgccaaaacaaagcagaacaaggcttaatgagaaacaatcaaatggagtattaaaaaaaaagtgtgaagaggtctaatatctcttgtgtaattgttacacatttttttccccacgtggcttgatcatacgctgttgtagcatttgaatgtataatcttgttccggttttgtacgatgcccggccccgattgatttcatttgattcgttatacatacagtaccgtgtgtactgatcacggccgctgagaggatacgctggtaaattaattgatgatctagtataataagcatgtatttttcccccctctgatatactactgtctttaat</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049019.1 RefSeq:Os01g0229200]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
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Annotated Information
Function
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Expression
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Structured Information
