Difference between revisions of "Os01g0631100"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
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GeneName = Os01g0631100|
 
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Description = Cas1p-like family protein|
 
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Version = NM_001050179.1 GI:115438728 GeneID:4326670|
 
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Length = 6900 bp|
 
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Definition = Oryza sativa Japonica Group Os01g0631100, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
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AP = Chromosome 1:26883720..26890619|
 
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CDS = 26884108..26884140,26885020..26885108,26885231..26885359,26885445..26885501,26885579..26885651<br>,26886244..26886402,26887490..26887639,26887748..26888003,26888093..26888214<br>,26888388..26888474,26888577..26888665,26888743..26888805,26888903..26888959<br>,26889897..26889993,26890083..26890241|
 
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GCID = <gbrowseImage1>
 
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name=NC_008394:26883720..26890619
 
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source=RiceChromosome01
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008394:26883720..26890619
 
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source=RiceChromosome01
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggaggtcttcggccccgtcaccgccggccaggtgtcatttttgcttggtctattccctgttctcattgcatggatctattcagaagtcctggagtacagaaaatcttcgtctatgaaagttcactccgattccaatttggagaatggaactgtcaaagaagatgataaaacggtattgctggaaggaggcctgtcaaagtcaccatctacaaagtttcggatcaattctacaaaagcaaacctcataaggtttataacaatggatgaatctttccttctggaaaatcgtgctgtactgagagcaatggcagaatttggcatcgttctggtttatttctacatttgtgatcggacaaacatatttccagaaagcaagaagagttacaaccgtgatctgtttctgtttttatacattcttctcatcatagcatcagcattaacatcacttaagaagcaccatgacaaatcagcattctcagggaaatctatactctatcttaatcgccatcaaacagaggaatggaaaggttggatgcaggtcctgtttttaatgtaccactattttgccgccactgaaatatacaatgcaattcgtgttttcattgctgcctatgtctggatgactggatttgggaacttctcatactattatattaagaaagactttagtcttgccagatttgctcagatgatgtggagacttaatttttttgtggctttctgctgcattgtccttgacaatgattacatgctctattacatatgcccaatgcacactttgtttactcttatggtatatgggtcccttggtctctttaataagtataatgagataccttcagtgatggcaatgaagattgtcagctgcttcttagcagtgatcttgatatgggaaattcctggtgtatttgaactgctgtggagtccatttacatttctgctaggctacaaggacccagagccttcaaaagcaaacttaccactgttgcatgagtggcatttccgatctggccttgatcgttatatatggattattggaatgatctatgcctacttccatccaaatgttgaaagatggatggaaaagcttgaagaatctgaaactaaggttaggttgtcaattaagggaaccatcattagtatttccttggtggctggctatttgtggtacgagtatatttacaaactagacaaaattacatacaacaagtaccatccgtacacatcatggattcctatcactgtttatatctccctaaggaattgcactcagcagcttagaaacgtctctttaactctttttgcgtggcttggcaagattactctggagacctatatctctcagatccacatttggctcaggtctaacatgcctaacgggcagccaaaatggcttctctctttcattccgggttacccactgctcaactttatgcttgctacagcaatatatcttcttatatcatacagagtgtttgagctgacaggtgtgttgaagtcagcttttattcccagcagagataacaatcgtctatatcaaaattttgttgccgggattgccatctccgtatgtctgtatttcctctcaattgtacttcttaagattcccattgtatag</cdnaseq>|
 
−
AA = <aaseq>MEVFGPVTAGQVSFLLGLFPVLIAWIYSEVLEYRKSSSMKVHSD                    SNLENGTVKEDDKTVLLEGGLSKSPSTKFRINSTKANLIRFITMDESFLLENRAVLRA                    MAEFGIVLVYFYICDRTNIFPESKKSYNRDLFLFLYILLIIASALTSLKKHHDKSAFS                    GKSILYLNRHQTEEWKGWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYY                    IKKDFSLARFAQMMWRLNFFVAFCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKY                    NEIPSVMAMKIVSCFLAVILIWEIPGVFELLWSPFTFLLGYKDPEPSKANLPLLHEWH                    FRSGLDRYIWIIGMIYAYFHPNVERWMEKLEESETKVRLSIKGTIISISLVAGYLWYE                    YIYKLDKITYNKYHPYTSWIPITVYISLRNCTQQLRNVSLTLFAWLGKITLETYISQI                    HIWLRSNMPNGQPKWLLSFIPGYPLLNFMLATAIYLLISYRVFELTGVLKSAFIPSRD                    NNRLYQNFVAGIAISVCLYFLSIVLLKIPIV</aaseq>|
 
−
DNA = <dnaseqindica>389..421#1301..1389#1512..1640#1726..1782#1860..1932#2525..2683#3771..3920#4029..4284#4374..4495#4669..4755#4858..4946#5024..5086#5184..5240#6178..6274#6364..6522#gagtctgaaactgaaggaaaccaaaccaaaaaaaactccaaccatcgtttgcctccctcgctctgacctcctctccctctcctccgcggccggccccgccgcgagcccgccaccctccggcctctgacggcgagcgaccacccaccacctcccgcttgcttcagatctcctcctccctccctcccgccggccgggccccgcgaccgcccgcccgctcgcttcccctcccgccaacgccgcatataacaccccctccctcccttaccgctcaccgaacgcgcggcgtgatcccctccctccctccctccctccgctgcgatcccggccggacccgtcgagctcccgggatctggtcgtggcacgctcaggggaggggctcccggcgggaatggaggtcttcggccccgtcaccgccggccaggtacgtacgttgcgcgcgtcgccgtcctcgctctctggataggtcgcgtgcgggtagtggaattggttgacgtgcctgtgctgttccgtgttgactgatgtgttaaaaccttgggtattgttctggacttgcggtcgctgctcttgaaaaaaaaaagtttctcccggattgcgcccgcgtaagttcgatttggtttgttgctggacgagttgaagtagatgcattctcctcgatagtcgtggcgttcatcgaattggatagcatgaggatgagcgttgattgatcgctgatggatgcggctttgattaattgatgggggcatatattggtatgatttttagataattaagcatttttcatgaaacggtcctgtgtgatgcgactgaaagttgaaacactccagcctctggaatggagcaaccactggttggttggttgcttgtcgtcttttatcttgcatctgacgctttaggaggttaggtgtacttatgttcccttgcagctgtcttagatttgaagttagtatagtttggtaccaactgagacacaaacatatggttgctctgccaagttaaaagtttcagattcaacctacattgcttacaggaaatgcacattgctgtttgtcttgatctgtatatgcttaacttgattttgggaaacagaaaaggaaaactactaaacacatattgtttagagtaagactctatgattaagttctgtcaggatagtggagtactagtaggtaagctaagtgcacgatttttgttgtttgcaaaaatatctaagctaagggcacatgttatttatgaacttcagttatcttagaattgacagcagtacaattgatggctcttgttgctttgtccattccttcaggtgtcatttttgcttggtctattccctgttctcattgcatggatctattcagaagtcctggagtacagaaaatcttcgtctatgaaagtgtaagttagctatattggtcagtattaactcagtagtacagcgatgtttttacgaattttctaagcctttgagtaacaaatacttaccctggctctatctgtgcatttttttgtttctatagtcactccgattccaatttggagaatggaactgtcaaagaagatgataaaacggtattgctggaaggaggcctgtcaaagtcaccatctacaaagtttcggatcaattctacaaaagcaaacctcataaggtgatttggcataatagtagatgtttgattcatgattacaaacgtggaatgctgagaattaacatctcaatgtcgtgagctgtaggtttataacaatggatgaatctttccttctggaaaatcgtgctgtactgagagcaatgtaagaccctatagaactattttgcatttactgaaaataaatatccatcgatatttacaagcgctatctttctacagggcagaatttggcatcgttctggtttatttctacatttgtgatcggacaaacatatttccagaaagcaagaaggtattgatgccatcattattttaatgatcgttctctcaatttttgattgaaagtaattggtattctttgctagattatcatattagtatagtgccatcctcccaccttactactgtactccttttttacttcttctttttatatctttccctccttttcagttgtaaattccaacattttacactaaggaaatagaatcttcatttctttgcttagtctttctctgaattttgcaactctaatagagaaattggctagaattgacataatcttgatattccatactacttacctgtatgttatttggtgtactgtgcctctagtcttttgtcatacaatctttacctactctactgtattctaccttctcgaacgaatgagcataagaggacatatgctgtaatcttattttgtttattaacaaatagttactgatgaatttcactgctcacttgcttaatatcttctattaaaccccttttattttttacatattaaatataattaacagactttggacagttcaacttttttgtgctatcatattatgaccatattttgataatgattggttttccctctactttgccagagttacaaccgtgatctgtttctgtttttatacattcttctcatcatagcatcagcattaacatcacttaagaagcaccatgacaaatcagcattctcagggaaatctatactctatcttaatcgccatcaaacagaggaatggaaaggttggatgcaggttagtgatttaaataattataaaattttgaatccactgtattttttttgtattctttcttttgttgtcctgtttatgttacaatttagtcaaaggaacacgtgagtgattggtgatcataataaatgttttctgaaagatctgatgctaatagatctgaagagtgggtttgttagtttttcctagacaagttcctgacagtttatctggatttggtatttctagtgggatctgtctatagttgccagaaatatattggccattccaaagcagtctgtgtgtgtgtgtgtgtgttgcgggggtggggggattcattgattgatatgtctagtgtttcataagttgaaggttttttggttgagatgatggaaacaaggtgggaacagttttgcatatcaggctgccactatatctgtaaactgagtctgaatggctgtgctcaacttacatttctactaacacagctgtgcttcatgtcatgtagaatacagtttagttcactgacacgcaggatcatacacagctataattaatgctgctgaaaatatttatgtattattttgcaatagtaccgtcaggttattttcaagtacatatgcttgaacatgcagtagtatatttggcatgtgttcggtatgaactaaactttctttagaaccacatattagtatatcttactagactgttgctagcgaaaacatcattatcttgtactgtttttctgcaatctgcagaggtgcatatatctactccttaaaaactggaattggtgatggtgttggtgtgctctatgtagcctcaactaagaaatttcgtggataaatttatgtagacatttgagtgctgtattttattttaggggcaaaatttactaaaattttgcatatgtatatgtagttttttgtattagagtataattgtttttcaaagtcagaacctatgttatattcatttgagatctgtcacaaactcacaacacacaggcataatggtagtttccttataatgtcagtcaccattattttcagttgctgtcttttgccaacttttaggtaagatttgtaacttttccacctgctgtttacaggtcctgtttttaatgtaccactattttgccgccactgaaatatacaatgcaattcgtgttttcattgctgcctatgtctggatgactggatttgggaacttctcatactattatattaagaaagactttagtcttgccagatttgctcaggtgccattctgatctttaaccccaatctgttctatatgatactttagtatgttttcatttccttgatttaatgcatggtttacactgacaaccatatttctaatgcagatgatgtggagacttaatttttttgtggctttctgctgcattgtccttgacaatgattacatgctctattacatatgcccaatgcacactttgtttactcttatggtatatgggtcccttggtctctttaataagtataatgagataccttcagtgatggcaatgaagattgtcagctgcttcttagcagtgatcttgatatgggaaattcctggtgtatttgaactgctgtggagtccatttacatttctgctaggttggttattcttatatttcgatgtgtcattttccttaccattcctagataaatcatgttaacatgtgttttgtacttttgtgatgcaggctacaaggacccagagccttcaaaagcaaacttaccactgttgcatgagtggcatttccgatctggccttgatcgttatatatggattattggaatgatctatgcctacttccatccaaatgtaagttttcaaggatcacagatgactgttttttatttgatatcactgtagagtctttgtccttctgcccttctccatcattgtttatgtaggatgcaattcattatgctatggtttcaggtatttttcttctatcagtagtagtgcttgaaatgtagatctctgtcatacaggttgaaagatggatggaaaagcttgaagaatctgaaactaaggttaggttgtcaattaagggaaccatcattagtatttccttggtggtaagttgcattatccataagtcccctctgtgctctacattaaattagcaatgatgcacggagtagactgcttattaaccattcctttttgctccacctcaggctggctatttgtggtacgagtatatttacaaactagacaaaattacatacaacaagtaccatccgtacacatcatggattcctatcacgtgagtatagaaatatgccataaaatatatatgtgggcttttgtatcagtgttaatgataccacggtttccatgcagtgtttatatctccctaaggaattgcactcagcagcttagaaacgtctctttaactctttttgcgtaagtcttttcaaactataacctaaaactttttatatttaatttcctgtggattcactttgtcagactaaacttataacatactttttaccaataggtggcttggcaagattactctggagacctatatctctcagatccacatttggctcaggtatgatgctagccttttgtgttcagtatgtgctcctatcttttgtgtctgtgactgcaatgctttaaattctgggctttgtttgtattaacctgttggacacaactgttcaataggagatatggttcagctatgtcaatattcgactcctgtaagaacttaaaaaatctctgttttttagcaacaggactccttttggacttctaagaaagctgttctttttgcaagtcatggacagaattatgccaatcctttttttggaccttcatgctttttcttaacatgaataatattaataacttagatgctgattttcttagtgctcaaacaagtagtcaaagtgtaagttccagaaaatgttagcttatcaggcagaagtaggaagtcacttaacggtagccaagccagtactgggttttcagtacttaagatgtgccagttctttaggaattggtgatcctaaggaaatccatcttcaacctgcgtactgttccgatttctcacatggataaactggagcagtgaatctcaagatcacaatgaaaagctagagccctagacatcatcatgttgatgcagggtacatgaccttctccatgtagaatcttgacacaatggagaacctgatgtagggagattccatcagatattctggacatttatcttttcacatttgctatcattagagtcaccactaaatacgtattacagtagcaactctaccataaaacgttatatccttgtttaagcctttaaggtaagcttatgatgtgaagtactggacagaggtgcagtgtccacaggacgaaacattggatggatcattaacctagattttggcaatgatggctgtgcacgtccaaagtttcagttttgtgcttacatatcaagatgttttgtctctttcgattgtcactgaattcttatatgcatacaggtctaacatgcctaacgggcagccaaaatggcttctctctttcattccgggttacccactgctcaactttatgcttgctacagcaatatatcttcttgtaagtaaaaaagaaaaactgaattccttattttaattccaatataactagagttgccaggaatatttatttgattgtcaacactgcagatatcatacagagtgtttgagctgacaggtgtgttgaagtcagcttttattcccagcagagataacaatcgtctatatcaaaattttgttgccgggattgccatctccgtatgtctgtatttcctctcaattgtacttcttaagattcccattgtataggtaaaagaacctcaacagacaacacaaatcaatgcatctattatatactagacaacagaaaggttttgtggcgcagttccaggaaaagaaaatgttcacggtagaagtttgcttgtgaattgttgttagaatgatccgtcgaccgtcggcgcctagttccaccttgcagatggagataagtgcactccaaataggaagaggatattgttttccacccctttggaaagtaatgtatacattcaggcagtccttgcgttcttttagaagtaatagttggttgcagacttttagccataaaaagtgtacaaggaatttctgtaaaatcaaagtcactgaaacacccagtggtagattcgtgcattggtcatatttcagagc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050179.1 RefSeq:Os01g0631100]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 1]]
 
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[[Category:Chromosome 1]]
 

Latest revision as of 04:50, 14 May 2015

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Structured Information