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| − | Please input one-sentence summary here.
| + | The rice '''''Os01g0756700''''' was reported as '''''OsKAT1''''' in 2007 <ref name="ref1" /> by researchers from Japan. |
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| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os01g0756700''''' '''''<=>''''' '''''OsKAT1''''','''''KAT1''''' |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * The rice '''''OsKAT1''''' encodes the rice homologue of Shaker family K + channel KAT1 ('''''OsKAT1'''''), suppressed the salt-sensitive phenotype of yeast strain G19 ( ∆ena1–4), which lacks a major component of Na+ efflux. |
| | + | * It also suppressed a K+ -transport-defective phenotype of yeast strain CY162 ( ∆trk1 ∆trk2), suggesting the enhancement of K+ uptake by '''''OsKAT1'''''. |
| | + | * '''''OsKAT1''''' is involved in salt tolerance of rice in cooperation with other K + channels by participating in maintenance of cytosolic cation homeostasis during salt stress, and thus protects cells from Na+ . |
| | | | |
| | ===Expression=== | | ===Expression=== |
| − | Please input expression information here.
| + | * The expression of OsKAT1 was restricted to internodes and rachides of wild-type rice, whereas other Shaker family genes were expressed in various organs. |
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| − | ===Evolution===
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| − | Please input evolution information here.
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan |
| | + | * Environmental Biofunction Division, National Institute Agro-Environmental Sciences, Tsukuba 305-8604, Japan |
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| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| − | | + | * <ref name="ref1"> |
| | + | Obata T, Kitamoto HK, Nakamura A, Fukuda A, Tanaka Y. Rice shaker potassium |
| | + | channel OsKAT1 confers tolerance to salinity stress on yeast and rice cells. |
| | + | Plant Physiol. 2007 Aug;144(4):1978-85. PubMed PMID: 17586689; PubMed Central |
| | + | PMCID: PMC1949902. |
| | + | </ref> |
| | + | </references> |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0756700|
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| − | Description = Similar to Potassium channel (Fragment)|
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| − | Version = NM_001050825.1 GI:115440020 GeneID:4325143|
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| − | Length = 2665 bp|
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| − | Definition = Oryza sativa Japonica Group Os01g0756700, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
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| − | AP = Chromosome 1:33517069..33519733|
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| − | CDS = 33517149..33517339,33517450..33517665,33517774..33517929,33518034..33518091,33518206..33518523<br>,33518614..33518853,33518933..33519031,33519117..33519149,33519258..33519455<br>|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008394:33517069..33519733
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008394:33517069..33519733
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgccacgttcttctcgtatgaatctgtggccgcattgcttcccgtgtttcgacgatggcgacagatcaggcaacaggttcagtactgtatgcaacttccccgatgatctcctcccgtcgctcggtgctaccgctcaccagcctcccaagctcaggaaatacctcgtctcgccttatgacccgcgttacaaggtctgggaaacatttctgatcatcctggtggtgtactcggcgtggatctgcccgctggagttcgcattcctgaggtacctgcccagcgcgccttttgtcgtggacgatgtcgtcaacgggtttttcgccgtcgacatcatgctcactttcttcgtcccgttcgtggacaagaagtcctacctcctcgttaacgatccgaagaaaatagcagtcaggtacctgtcgtcttggttcgtcttcgatgtatgctcgactgttccattccactccatcagcctgctgttcaacgagcacgggcatgaccttggcttcaagtttctcaatgttctcaggctctggcggttgcgtcgagtcagttcgatgtttgcgaggcttgagaaggacatccggttcaactacgcggtgatacgctgcacgaagctcatctcggtcaccctcttcgcgatacactgcgccgggtgcatcaactaccttatcgccgacaggtacccggacccgaggaggacatggatcggcgccgtgatgcccaacttcagggaggacgggctgtggatccggtacgtgacggccatgtactggtccatcacgacgctgaccaccacgggctacggcgacctgcacgccgagaacgccagggagatgctgttcggcatctgctacatgctcttcaacctctggctcaccgcctacctcatcggcaacatgaccaacctcgtcgtccacagcaccagccgcacccgagactttagggatgtggttcaggccgcctcagaattcgcggcgaggaaccagctgccgcagcaaatagaggagcagatgctgaaccacatatgcctccggtacaagaccgatggcctcaagcagcaggagacgctagacgtcctcccgaaggcgatgcgatccagcatttctcactacctcttcttccgggttgttcaaggagcctacctgttcaagggagtctcctcaaggttcatccagcagttggtaacagagatgcaagcagagtacttcgccccaaaggaagacatcatactgcagaatgacagcccatcggacttgtatcttcttgtatccggagcagtagacattctggtattcctagatggaacagaacaggtttacaggagagcagctgagggagaactgctaggggagataggtgtactgtgcaacaagccacagtcgttcactttccggacgacaaaactatctcagattctgaggatcagtaggaccaagctgttgggtatcatccaggagaacagagaagacggcgacatcatcagaagcaaccttcagcaagtgaacgtataa</cdnaseq>|
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| − | AA = <aaseq>MPRSSRMNLWPHCFPCFDDGDRSGNRFSTVCNFPDDLLPSLGAT AHQPPKLRKYLVSPYDPRYKVWETFLIILVVYSAWICPLEFAFLRYLPSAPFVVDDVV NGFFAVDIMLTFFVPFVDKKSYLLVNDPKKIAVRYLSSWFVFDVCSTVPFHSISLLFN EHGHDLGFKFLNVLRLWRLRRVSSMFARLEKDIRFNYAVIRCTKLISVTLFAIHCAGC INYLIADRYPDPRRTWIGAVMPNFREDGLWIRYVTAMYWSITTLTTTGYGDLHAENAR EMLFGICYMLFNLWLTAYLIGNMTNLVVHSTSRTRDFRDVVQAASEFAARNQLPQQIE EQMLNHICLRYKTDGLKQQETLDVLPKAMRSSISHYLFFRVVQGAYLFKGVSSRFIQQ LVTEMQAEYFAPKEDIILQNDSPSDLYLLVSGAVDILVFLDGTEQVYRRAAEGELLGE IGVLCNKPQSFTFRTTKLSQILRISRTKLLGIIQENREDGDIIRSNLQQVNV</aaseq>|
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| − | DNA = <dnaseqindica>81..271#382..597#706..861#966..1023#1138..1455#1546..1785#1865..1963#2049..2081#2190..2387#attcagcaacctgacctctcccgttctcctgcagctagcctccggccagtctccagcgcgtcgccctggaccgaaatattatgccacgttcttctcgtatgaatctgtggccgcattgcttcccgtgtttcgacgatggcgacagatcaggcaacaggttcagtactgtatgcaacttccccgatgatctcctcccgtcgctcggtgctaccgctcaccagcctcccaagctcaggaaatacctcgtctcgccttatgacccgcgttacaagtacgcgtgcctctgcttccgtatatgcctccaagactgttgttgttcatggatatcgatcgatcaagaactgaaatgtacgttttgatgctccttgttaatttttacagggtctgggaaacatttctgatcatcctggtggtgtactcggcgtggatctgcccgctggagttcgcattcctgaggtacctgcccagcgcgccttttgtcgtggacgatgtcgtcaacgggtttttcgccgtcgacatcatgctcactttcttcgtcccgttcgtggacaagaagtcctacctcctcgttaacgatccgaagaaaatagcagtcaggtacgtactagctagttagttcagaacttgaacagctagttaatttccggagatcaggcagacagacaacatggcacagcttaattttcttgtgctcactgcattcaggtacctgtcgtcttggttcgtcttcgatgtatgctcgactgttccattccactccatcagcctgctgttcaacgagcacgggcatgaccttggcttcaagtttctcaatgttctcaggctctggcggttgcgtcgagtcagttcgatgtttgcgaggtaaacgccacacgtgccctaccaatccactgtaaaatggttatacgctagccagtagtcagcatgtgacatatatatactatactttgatacaccatatataggcttgagaaggacatccggttcaactacgcggtgatacgctgcacgaagctcatctcggtacgtccatgatacgatatcttttcctctgatcagtacgttctattcctctgatcagtacgttctactccaccaacgagcaaaacgaaacttctatctgcatggcaacaccaggtcaccctcttcgcgatacactgcgccgggtgcatcaactaccttatcgccgacaggtacccggacccgaggaggacatggatcggcgccgtgatgcccaacttcagggaggacgggctgtggatccggtacgtgacggccatgtactggtccatcacgacgctgaccaccacgggctacggcgacctgcacgccgagaacgccagggagatgctgttcggcatctgctacatgctcttcaacctctggctcaccgcctacctcatcggcaacatgaccaacctcgtcgtccacagcaccagccgcacccgagactttgtacgtactgtccgatcctaccaaagcttctgtgcttttgttctctgtattgtggtttgacgatcgaaatggcttgtgcgttatttgcagagggatgtggttcaggccgcctcagaattcgcggcgaggaaccagctgccgcagcaaatagaggagcagatgctgaaccacatatgcctccggtacaagaccgatggcctcaagcagcaggagacgctagacgtcctcccgaaggcgatgcgatccagcatttctcactacctcttcttccgggttgttcaaggagcctacctgttcaagggagtctcctcaaggttcatccagcagttggtgagaaacgaggctgaattttgcataaaaaattgcgtaatggaagaccctcattaacaatttggttgtatatatgcaggtaacagagatgcaagcagagtacttcgccccaaaggaagacatcatactgcagaatgacagcccatcggacttgtatcttcttgtatccggagcagtagtacgtaaaatctagtactttaatactacctatatatgtatgatcagtgcacaaatcgtaacggaaaatgaatttctacttacaggacattctggtattcctagatggaacagaacaggtaatggtatctcctgagttgctgtttctgaaaagacagataacgggtttccggacaaagatcagacgcacttgaaaaaatgacacctggggccgtttcatgtttcaggtttacaggagagcagctgagggagaactgctaggggagataggtgtactgtgcaacaagccacagtcgttcactttccggacgacaaaactatctcagattctgaggatcagtaggaccaagctgttgggtatcatccaggagaacagagaagacggcgacatcatcagaagcaaccttcagcaagtgaacgtataagtgggctagcttcgctgggcgtgctcaacgcaagacagatgcctctgttggaaaatagcatttaagttttgagcggatagcatctaatagtttctgtacaaaaaactaaaaatggaggaaagatcatgcggtggaactggtgaaaactgaaaagattatctgtactagaacatcatgcagtgtaactggtgaaaaaacgatctgtgttcggacagatcttggacgttgagacaatatcacctgcctgtcaaagaaaactactactacctttaccaatc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001050825.1 RefSeq:Os01g0756700]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
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| − | [[Category:Chromosome 1]]
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