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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0873800|
| |
| − | Description = Conserved hypothetical protein|
| |
| − | Version = NM_001051489.1 GI:115441348 GeneID:4324767|
| |
| − | Length = 6726 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0873800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:39646569..39653294|
| |
| − | CDS = 39646786..39647073,39647554..39649893,39649985..39650059,39650131..39650322,39650510..39650761<br>,39650836..39651391,39651469..39651676,39652212..39652324,39653065..39653207<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:39646569..39653294
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:39646569..39653294
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggacgcgtcgagcgagctgcagtgcgtggggaggctggaggtcgccgcgccgccgccggcgcgctacctccgggtgggctccctccccgtccccaccgactcccccgcctcgctccccgccctcctcccatcctcgtccccaactggagctccaaggtatcaaatgttgccattggagactgatctcaacacactcccgatgataccaaatattccagaaaaggttttcccgatggacgcaaagagtactgaaggatcacgatatggaagtggacttgccaaccaaaacttatcaaggaagtgtgaagcactggctgtgtcaggcctagctgaatatggtgatgaaatagatgtggttgctccaactgatatcctaaagcagattttcaaaataccatactccaaggcacaagtatctattgctgttaaccgtattggagatacacttattctaaacacaggtcctgatgttgatgaaggtgaaaagatattcaggagacaaagcaaccaccccaaaggatctgatccttcaatgtttcttaattttgcaatgcattcagtgagagcagaagcttgtgattgcccaccaagtcatcaaccatcaaaggagaagcaaacggcatccgctatcttgcgtggaccatttggccaaagggagggtccattggattcgccatcgtcatctagttttagcacttcaccttatctggaccagaatatcagtaaaagtagaaaaacatcacatggtgctcgtgaaagcctgtactggggtgcaagggaaaataagcagaaagttaaagggtctgaccctgttaagaaaaccactcatgttggtgacaaacccagatgcgacgtgcaagaatccgagaaaagtaggagggtgggaaacaatggatttcggaaggtttgcttttggcagtttcataatttccatatgcttttgggtagcgacttgcttatatttagcaatgagaaatatatggcggtcagcttacacctctgggatgtttcgagacaggttactccactgaactggcttgaagcttggctagataatataatggcaagtgtgccagaattggctatatgttatcatcaaaatggtgttgtgcaaggttatgagctcttgaaaaatgatgatatttttctacttaagggtgtatctgatgatggtacacctgcatttcatccacaagttgtccagcaaaatggccttgctgtcctgaggttcctgcaagataactgtaagcaagaccctggtgcatattggttgtacaagggtgctgaagaggatgttatacagctgtatgatctgtctatcttacctcaaaatcatactgctggtgatcatagatctacttgtggtcctatgtcttctttaatgaagaagggtagaaaggagtcgttgttctctttgggcacactcttgtaccgtgttgctcacaggatgtctttatcaaaggtgcctagtaatagagcaaaatgtgcgaagttcttcaaaaaatgtttggactttctcagcgaacaggatcacttggttgtccgggcgtatgctcatgaacagtttgcaaggctcatccttaggtgttacgaggagttggaattgacatctgaatcatttttgcttgaatctgaagttactcttactgacttggatgagtctccagacctgagccttgagaatttaccatcgaagcaaaatgaagtgctgacagagattagcgaggaaccagcaaccttagatggaatgttggaatgttcacggtcaggatcttctcaagcgtcaaatagtttagtggatccgggtcatgttgacattagtcctgtatcttcagctacaaaaggagatgttactgtggatagcttggtaatgtgtcagtctggaactcaggtatcaaggacaattgctgatgcaatatcctccaagttggcagctatacaccatgtatcacaagctatcaaatcccttcgatggaaccgacagctccagaatacacaagatgattgcgttggcaatgcagataccatttgggagaaacctgttgacttctctttatgccgatgtggtgacattgactgtattgaagtttgcgacattagagagtggctaccaaaatcgaaaatggatcacaaattatggaaacttgttcttttgctaggtgaatcttatctggcactaggagaggcatacaagaatgacgggcagcttcgtcgcactcttaaagttgtggaattggcttgtctagtttatgggtctatgcctaaaaatctcgagggtgagcaattcatctcatccatgtccaatagttcgttgagtgttgaagatggtgatctaaaggcaaatcttgttttggatgaagcagactatttcaaaaatgctaaatgtttcaattatgatgtttctgctgggcagttgcctccaaactatttattttgggttaaggcgtggatgcttgtaggggatgtctatgcagaatatcacagattgagaggtcaacaagcaccagtgttgcctgaacaaaagcctgatggtgaagttagaatgtcaaatgaagttgcaatggaggtcaaacgtcttaagagaaaactgggaaaggataagcagaattgtggcacatgttcactgataaattgtagctgccaaagtgatagggcaaatagtggcagcagtgcaagcagcagtagttctgaggcctctacactatatggaagaaagaaaaacaaaaaatcatctggcaggaacttccattcacagtctagagaaactaaagagaatcccagcacccaggactctatgggagattctgaaaaaaggtctgtatcgaatgttgaaattgatactaataattacaccatggaaaatcaatcaagaaataatgatggggatcctgataaatctaaagaagatgtttccagtgtgagggttggtggtatctttaagttccttggaggacctgaaccaggagatgttgaatacaatttgcattctgctattcattgctacgatgcagccaagggagtcatttttgcatttccagtgcccttggctgaaaaatccaccattcttaagaaaagaggctgggcattcaatgaactgggctgccataggcttgaaagtagaaatctgggtaatgctgaaattgcttttgctgatgctattaaagcatttcaagaggttgctgaccacactaatgttatattaatcaactgtaacttaggtcatggtagaagagctttagcagagcaatttgtgtcaaggatagatgaatttcagaagtatgattttcctcaagatgcatatatgcaatcctttaagtctgctaagtcggaatattttcaagctataaactattacacagcagctaagaggcaactaacatatgctgacaatgaggttgataaagtactttacaatgaggtttacactcagtatgcccatacacacctgaggcttggaatgcttttggcaagggaaagcttcttaactgacagttatgaaggtggatttgttgatgaatcatctaatagaacagttcttgagatttcagcaagtgatgctttcagagaggctttgtctacatatgaatctcttggtgaacatcgcaagcaggaagccgcttttggccactttcagcttgcttgttatcagagggatctatgcttaaggttcctcgatttaattgacaaggaggtcaaacagaagaatgaggataaatatcgtcagaaagctaagtggtatggttctttagcagaaaagaactggcagagagctttagaattttatggtccaaagacacattctaccatgttcttaaacatccttatggcacaatctgccctttccgttaacctctctgattcgttccactcaagtgtgatgcttgaaaatgcattggtgcacttgctggacggtcgccatgtggttgaagcaaatgatgagtattcaaacgacttggatctggacataaaaccgaaattctggagccagctgcagcgcctgctgaagagcatgttggcagctgctcgaccggcagcttctgtcggccaggccaacgccagcaacagcagaggagacaccgccaaactaaaagagatgtatcgtctgtcgctcaaatcaacctctctgggccagctgcacgcgttgcacaagatttgggtctcctaa</cdnaseq>|
| |
| − | AA = <aaseq>MDASSELQCVGRLEVAAPPPARYLRVGSLPVPTDSPASLPALLP SSSPTGAPRYQMLPLETDLNTLPMIPNIPEKVFPMDAKSTEGSRYGSGLANQNLSRKC EALAVSGLAEYGDEIDVVAPTDILKQIFKIPYSKAQVSIAVNRIGDTLILNTGPDVDE GEKIFRRQSNHPKGSDPSMFLNFAMHSVRAEACDCPPSHQPSKEKQTASAILRGPFGQ REGPLDSPSSSSFSTSPYLDQNISKSRKTSHGARESLYWGARENKQKVKGSDPVKKTT HVGDKPRCDVQESEKSRRVGNNGFRKVCFWQFHNFHMLLGSDLLIFSNEKYMAVSLHL WDVSRQVTPLNWLEAWLDNIMASVPELAICYHQNGVVQGYELLKNDDIFLLKGVSDDG TPAFHPQVVQQNGLAVLRFLQDNCKQDPGAYWLYKGAEEDVIQLYDLSILPQNHTAGD HRSTCGPMSSLMKKGRKESLFSLGTLLYRVAHRMSLSKVPSNRAKCAKFFKKCLDFLS EQDHLVVRAYAHEQFARLILRCYEELELTSESFLLESEVTLTDLDESPDLSLENLPSK QNEVLTEISEEPATLDGMLECSRSGSSQASNSLVDPGHVDISPVSSATKGDVTVDSLV MCQSGTQVSRTIADAISSKLAAIHHVSQAIKSLRWNRQLQNTQDDCVGNADTIWEKPV DFSLCRCGDIDCIEVCDIREWLPKSKMDHKLWKLVLLLGESYLALGEAYKNDGQLRRT LKVVELACLVYGSMPKNLEGEQFISSMSNSSLSVEDGDLKANLVLDEADYFKNAKCFN YDVSAGQLPPNYLFWVKAWMLVGDVYAEYHRLRGQQAPVLPEQKPDGEVRMSNEVAME VKRLKRKLGKDKQNCGTCSLINCSCQSDRANSGSSASSSSSEASTLYGRKKNKKSSGR NFHSQSRETKENPSTQDSMGDSEKRSVSNVEIDTNNYTMENQSRNNDGDPDKSKEDVS SVRVGGIFKFLGGPEPGDVEYNLHSAIHCYDAAKGVIFAFPVPLAEKSTILKKRGWAF NELGCHRLESRNLGNAEIAFADAIKAFQEVADHTNVILINCNLGHGRRALAEQFVSRI DEFQKYDFPQDAYMQSFKSAKSEYFQAINYYTAAKRQLTYADNEVDKVLYNEVYTQYA HTHLRLGMLLARESFLTDSYEGGFVDESSNRTVLEISASDAFREALSTYESLGEHRKQ EAAFGHFQLACYQRDLCLRFLDLIDKEVKQKNEDKYRQKAKWYGSLAEKNWQRALEFY GPKTHSTMFLNILMAQSALSVNLSDSFHSSVMLENALVHLLDGRHVVEANDEYSNDLD LDIKPKFWSQLQRLLKSMLAAARPAASVGQANASNSRGDTAKLKEMYRLSLKSTSLGQ LHALHKIWVS</aaseq>|
| |
| − | DNA = <dnaseqindica>6222..6509#3402..5741#3236..3310#2973..3164#2534..2785#1904..2459#1619..1826#971..1083#88..230#attagccaaagcatccaaacgcccgagaaaaaaccgcggcgatcggcggcggcggcggcggcggcgaggggtacggctacggcggcgatggacgcgtcgagcgagctgcagtgcgtggggaggctggaggtcgccgcgccgccgccggcgcgctacctccgggtgggctccctccccgtccccaccgactcccccgcctcgctccccgccctcctcccatcctcgtccccgtgagctctctctctctctctctctctctctctctctctctctctctctctctctctctctccctgaacttcggttcggagtgcgttcccgcgcgattgatgatgtgatgcgtcgagttgttcagcaatgcgttcgcgatttgttgagtttctggtgtagctgttcctgatcgagtcgcagggttataagagtttgggattttgctaggattttaacggttgggagcggggaattcgagctagaataccattggagcgagcgcttctgtgtggtggaattagaattgtttgtgattgtgattcgttaggggtgactaaggagaggaagtggggtttagctgagatttggagacaaggactcagtctctttgttcgatttgttgattggtatgagagattgttgatggattgattagggggaagcgaatggcaaggcagttgtgctgctgtaagcaaatattggcattattatgtatctgaattcagtggctacaacttatagccgagcagaacatagatatttctgtccggacctcgaatgctgatggttattaaaatgctgcttagcctttttttttcctcctaatgcatgtgtattatttaaatgtttagttattatcattttgagatattactgtataagagaacatagtcgttataaaatgggatttatcgagtttgctgatacttgattaaggagaagtgatgttttgatttttctcttgtcacaaataatgtagaactggagctccaaggtatcaaatgttgccattggagactgatctcaacacactcccgatgataccaaatattccagaaaaggttttcccgatggacgcaaagagtactgaaggtgatctcttcttgaggcttgatcattatagtttgattcacaaaagaaatggcaggcttcttaagagcttctaccatagggaaaacatagataatattacatcttgtaggtgcaagtaaattttaccatacatgccactcttactatcaggattcctactgtatccaagttttcatggttgcatcttgtatgtgtagattatatttggtattttaaatagctttatttatgcaatctagatgagaaggccagctaaatttatattccaaatttttttcttcggctgcaatagaagacttcatatctcctgatgcatccattagtattaacaaatggatagtcagaggaagctaaaataatggaaatgcgataccttggttttctattctatcgtcacacatgcacaagctgttgttgcagctgcaagaccacatgtggctataagtctgtttgagctatgtaatagtcacagttggttatatctgctgggcatgccaatgtatttctaattgttatttttgttcatattattcaggatcacgatatggaagtggacttgccaaccaaaacttatcaaggaagtgtgaagcactggctgtgtcaggcctagctgaatatggtgatgaaatagatgtggttgctccaactgatatcctaaagcagattttcaaaataccatactccaaggcacaagtatctattgctgttaaccgtattggagatacacttattctaaacacagggtaaattggccgtttcattgttgcaactagctaccatgctctatgtacttcatactaatgcaatgtacgtgttgcagtcctgatgttgatgaaggtgaaaagatattcaggagacaaagcaaccaccccaaaggatctgatccttcaatgtttcttaattttgcaatgcattcagtgagagcagaagcttgtgattgcccaccaagtcatcaaccatcaaaggagaagcaaacggcatccgctatcttgcgtggaccatttggccaaagggagggtccattggattcgccatcgtcatctagttttagcacttcaccttatctggaccagaatatcagtaaaagtagaaaaacatcacatggtgctcgtgaaagcctgtactggggtgcaagggaaaataagcagaaagttaaagggtctgaccctgttaagaaaaccactcatgttggtgacaaacccagatgcgacgtgcaagaatccgagaaaagtaggagggtgggaaacaatggatttcggaaggtttgcttttggcagtttcataatttccatatgcttttgggtagcgacttgcttatatttagcaatgagaaatatatggcggtcagcttacacctctgggatgtttcgagacaggtatgttttattctattgaatatggcttcacaatttcattttttactctttctgttgacaaatgtgtttcataggttactccactgaactggcttgaagcttggctagataatataatggcaagtgtgccagaattggctatatgttatcatcaaaatggtgttgtgcaaggttatgagctcttgaaaaatgatgatatttttctacttaagggtgtatctgatgatggtacacctgcatttcatccacaagttgtccagcaaaatggccttgctgtcctgaggttcctgcaagataactgtaagcaagaccctggtgcatattgggtatggcttctaagtttattcgttctaattatcacatgctagtacttaacctttagtttcttatattatattatttgtgcgacttgggtatattttagacacaactccgacctcagtttttgcaataattttattatgctagttcttgtgctttattcatttatatactgaagttgtgtgttctcagttgtacaagggtgctgaagaggatgttatacagctgtatgatctgtctatcttacctcaaaatcatactgctggtgatcatagatctacttgtggtcctatgtcttctttaatgaagaagggtagaaaggagtcgttgttctctttgggcacactcttgtaccgtgttgctcacaggatgtctttatcaaaggtactagcgaaatgtctcttttctttgcttcatggagctttactgatcgttagtatgtatatgctttgcaggtgcctagtaatagagcaaaatgtgcgaagttcttcaaaaaatgtttggactttctcagcgaacaggatcacttggtatttttatttatcatgtcattatttatcagtttacagtttttcttgtagcgctagaaatcttctcaagattttctatttgatcctttaggttgtccgggcgtatgctcatgaacagtttgcaaggctcatccttaggtgttacgaggagttggaattgacatctgaatcatttttgcttgaatctgaagttactcttactgacttggatgagtctccagacctgagccttgagaatttaccatcgaagcaaaatgaagtgctgacagagattagcgaggaaccagcaaccttagatggaatgttggaatgttcacggtcaggatcttctcaagcgtcaaatagtttagtggatccgggtcatgttgacattagtcctgtatcttcagctacaaaaggagatgttactgtggatagcttggtaatgtgtcagtctggaactcaggtatcaaggacaattgctgatgcaatatcctccaagttggcagctatacaccatgtatcacaagctatcaaatcccttcgatggaaccgacagctccagaatacacaagatgattgcgttggcaatgcagataccatttgggagaaacctgttgacttctctttatgccgatgtggtgacattgactgtattgaagtttgcgacattagagagtggctaccaaaatcgaaaatggatcacaaattatggaaacttgttcttttgctaggtgaatcttatctggcactaggagaggcatacaagaatgacgggcagcttcgtcgcactcttaaagttgtggaattggcttgtctagtttatgggtctatgcctaaaaatctcgagggtgagcaattcatctcatccatgtccaatagttcgttgagtgttgaagatggtgatctaaaggcaaatcttgttttggatgaagcagactatttcaaaaatgctaaatgtttcaattatgatgtttctgctgggcagttgcctccaaactatttattttgggttaaggcgtggatgcttgtaggggatgtctatgcagaatatcacagattgagaggtcaacaagcaccagtgttgcctgaacaaaagcctgatggtgaagttagaatgtcaaatgaagttgcaatggaggtcaaacgtcttaagagaaaactgggaaaggataagcagaattgtggcacatgttcactgataaattgtagctgccaaagtgatagggcaaatagtggcagcagtgcaagcagcagtagttctgaggcctctacactatatggaagaaagaaaaacaaaaaatcatctggcaggaacttccattcacagtctagagaaactaaagagaatcccagcacccaggactctatgggagattctgaaaaaaggtctgtatcgaatgttgaaattgatactaataattacaccatggaaaatcaatcaagaaataatgatggggatcctgataaatctaaagaagatgtttccagtgtgagggttggtggtatctttaagttccttggaggacctgaaccaggagatgttgaatacaatttgcattctgctattcattgctacgatgcagccaagggagtcatttttgcatttccagtgcccttggctgaaaaatccaccattcttaagaaaagaggctgggcattcaatgaactgggctgccataggcttgaaagtagaaatctgggtaatgctgaaattgcttttgctgatgctattaaagcatttcaagaggttgctgaccacactaatgttatattaatcaactgtaacttaggtcatggtagaagagctttagcagagcaatttgtgtcaaggatagatgaatttcagaagtatgattttcctcaagatgcatatatgcaatcctttaagtctgctaagtcggaatattttcaagctataaactattacacagcagctaagaggcaactaacatatgctgacaatgaggttgataaagtactttacaatgaggtttacactcagtatgcccatacacacctgaggcttggaatgcttttggcaagggaaagcttcttaactgacagttatgaaggtggatttgttgatgaatcatctaatagaacagttcttgagatttcagcaagtgatgctttcagagaggctttgtctacatatgaatctcttggtgaacatcgcaagcaggaagccgcttttggccactttcagcttgcttgttatcagagggatctatgcttaaggttcctcgatttaattgacaaggaggtcaaacagaagaatgaggataaatatcgtcagaaagctaagtggtatggttctttagcagaaaagaactggcagagagctttagaattttatggtccaaagacacattctaccatgttcttaaacatccttatggcacaatctgccctttccgttaacctctctgattcgttccactcaagtgtggtatgttccttgccatctcgaacgatcccatctgctctttgtgctagattttatttccattattattctttctagcatcatgggagtgcataacctgttacatttggttagaacagagcagcgctgtctgcttagcataattttagtaaattgtactactatgattagtgtcataatgtgtcgtggctgtcatggcagagtagttctgctgagtagtttctgacaagtgacaagtaggtggaaaaggaagcatttatactgttgcacaaattgcaatatgtcaatgcactatggctactaacacagactaatcatataataaccaatagttaggaagtgtagcttgagttctgagttagcctctgtgcctttgctgctaccgtgttgttgttccccagtatagaatgccttcttcgggcataccaaaagatgcaaatgttctgttttcgctttcataaacattttgggtctcttcttcagatgcttgaaaatgcattggtgcacttgctggacggtcgccatgtggttgaagcaaatgatgagtattcaaacgacttggatctggacataaaaccgaaattctggagccagctgcagcgcctgctgaagagcatgttggcagctgctcgaccggcagcttctgtcggccaggccaacgccagcaacagcagaggagacaccgccaaactaaaagagatgtatcgtctgtcgctcaaatcaacctctctgggccagctgcacgcgttgcacaagatttgggtctcctaacacatctctgttgtacaaacatagacatcagattgctctacaaacgagtgttgtacatgttgattacatcgtcatcagcatctttgagcttgtaacttatgctgtcttttatgtttttatccatttgttatttattttttaaaatctctgggatgacttacatgctgattgtaaatttgcaattgtagtaatagttgtggaatgtgttgtaacttac</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051489.1 RefSeq:Os01g0873800]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
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Annotated Information
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Structured Information
