Difference between revisions of "Os02g0606900"

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Please input one-sentence summary here.
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The rice '''''Os02g0606900''''' was reported as '''''OsPP2C21''''' in 2008 <ref name="ref1" /> by researchers from China.  
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==Annotated Information==
 
==Annotated Information==
 +
===Gene Symbol===
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*'''''Os02g0606900''''' '''''<=>''''' '''''OsPP2C21'''''
 
===Function===
 
===Function===
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Please input function information here.
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* The protein phosphatase 2Cs (PP2Cs) from various organisms have been implicated to act as negative modulators of protein kinase pathways involved in diverse environmental stress responses and developmental processes.<ref name="ref1" />
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* Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis.<ref name="ref1" /> <ref name="ref2" />
 
===Expression===
 
===Expression===
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Please input expression information here.
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* The expression analyses from the researchers provide evidences that PP2C genes in different subfamilies might play different functional roles in distinct signaling pathways.<ref name="ref1" />
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===Knowledge extension===
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===Evolution===
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* The reversible phosphorylation of proteins is a fundamental mechanism by which living organisms modulate cellular processes including cell cycle events, growth factor responses, hormone and environmental stimuli responses, metabolic control, and developmental processes.<ref name="ref1" />
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Please input evolution information here.
 
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You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
−
 
 
==Labs working on this gene==
 
==Labs working on this gene==
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Please input related labs here.
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* State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, Shandong 271018, PR China
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* Biology Department, Millersville University of Pennsylvania, 288 Roddy Hall, 50 E Frederick St, PO Box 1002, Millersville PA, 17551-0302, USA
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* Department of Chemistry, Fudan University, 220 Handan Road, Shanghai 200433, PR China
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* Institutes of Biomedical Sciences, Fudan University, 130 Dongan Road, Shanghai 200032, PR China
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* Centre for Forest Biology & Department of Biology, University of Victoria, Victoria BC, V8W 3N5, Canada
 
==References==
 
==References==
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Please input cited references here.
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<references>
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* <ref name="ref1">
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Xue T, Wang D, Zhang S, Ehlting J, Ni F, Jakab S, Zheng C, Zhong Y.
 +
Genome-wide and expression analysis of protein phosphatase 2C in rice and
 +
Arabidopsis. BMC Genomics. 2008 Nov 20;9:550. doi: 10.1186/1471-2164-9-550.
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PubMed PMID: 19021904; PubMed Central PMCID: PMC2612031.
 +
</ref>
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* <ref name="ref2">
 +
Umezawa T, Sugiyama N, Mizoguchi M, Hayashi S, Myouga F, Yamaguchi-Shinozaki
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K, Ishihama Y, Hirayama T, Shinozaki K. Type 2C protein phosphatases directly
 +
regulate abscisic acid-activated protein kinases in Arabidopsis. Proc Natl Acad
 +
Sci U S A. 2009 Oct 13;106(41):17588-93. doi: 10.1073/pnas.0907095106. Epub 2009
 +
Sep 29. PubMed PMID: 19805022; PubMed Central PMCID: PMC2754379.
 +
</ref>
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</references>
  
 
==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 2]]
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GeneName = Os02g0606900|
 
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Description = Similar to Protein phosphatase 2C gamma isoform (EC 3.1.3.16) (PP2C-gamma) (Protein phosphatase magnesium-dependent 1 gamma) (Protein phosphatase 1C) (Fibroblast growth factor inducible protein 13) (FIN13)|
 
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Version = NM_001053917.1 GI:115447204 GeneID:4329930|
 
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Length = 4702 bp|
 
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Definition = Oryza sativa Japonica Group Os02g0606900, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 2|Chromosome 2]]|
 
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AP = Chromosome 2:24634145..24638846|
 
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CDS = 24635788..24635844,24635921..24635997,24636081..24636204,24636316..24636432,24636907..24637015<br>,24637192..24637297,24637511..24637574,24637682..24637801|
 
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GCID = <gbrowseImage1>
 
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name=NC_008395:24634145..24638846
 
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source=RiceChromosome02
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008395:24634145..24638846
 
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source=RiceChromosome02
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atgggtgcatctcccagccgtccactagaacaatcaccatcatctagtgaaggagagaatcacagagttaagtatgcctcatatactacgcaaggatttcgcccgcacatggaagatgcacttgcagttgaactagatctagatgcgaccacgtcattctttggtgtttatgatggccatggaggagctgaagtagcaatgtactgtgcaaaacgatttcatactatgcttcttgaggatgtagactatatcaacaatctgcccaatgcaattacgtctgtatgcttcagacttgatgatgatttgcaacgatcaaatgaatggagggagtcacttaatccctgtgctaatcgcaattgtctcactaacatttgtgctaatctccaccatttcacagaggattacgttccgccgtcatatgaaggtagcacagcatgtgtggtaatcattagaggaaatcagatcattgttgggaatgttggtgattctcgttgcgtgctttcaaagaatggtcaggcaattagtttatcctttgatcacaaaccacaccatgaagctgaacgcgaaagaattcaaagagcaggaggacatgtatttttgcaaagaattctaggaatgttagccacgtccagagcgattggtgattttgcatataagcagaacagaaatatgcctccttcacagcaaatggtgacatgtgttcctgacattcgcgtcgaaaacataactgatgatactgaatttcttgtcatagcaagtgatggtgtctggtag</cdnaseq>|
 
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AA = <aaseq>MGASPSRPLEQSPSSSEGENHRVKYASYTTQGFRPHMEDALAVE                    LDLDATTSFFGVYDGHGGAEVAMYCAKRFHTMLLEDVDYINNLPNAITSVCFRLDDDL                    QRSNEWRESLNPCANRNCLTNICANLHHFTEDYVPPSYEGSTACVVIIRGNQIIVGNV                    GDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVFLQRILGMLATSRAIGDFAY                    KQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVW</aaseq>|
 
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DNA = <dnaseqindica>3003..3059#2850..2926#2643..2766#2415..2531#1832..1940#1550..1655#1273..1336#1046..1165#gctgttcctgctgctttcgaagatggtggcagttttcttggaggagaaggaggtgacgagcaccaacctatggtgatcttcgttgtctccttttattttcgatcttacttatcattcttctccaccttgttcctgttgttgcgtctactgctgcttccgtgtcgctgctgttgcggttcgcatggtctctgttggaggaggtggtaatctgtaattctgtatctgtccgtcttcttgcaactggatagtgttcatcagttcatgagttcatccttcatcgtagcacccgtttctacctacgcattttcttgatgtttcttttcctggcgttatcgatgtaaacatggccgctcgatgatctatatctgctcgtctctatcgtttacttattttggtatgtttttccagattctttctgcgtgtaggtgtgctttcctctctttttttttcccacactgggttttgacgttctgttgattcctcttattcttgttgattcttgatgatgctgtgcacgcggaaactcggtgatcttgatttataacctgtccgttcttgctgttgagtgccagcgagcagtgttactctgtttttcatgaaagtacttttcattcagtagatgtttacatccatagatgtatgagtctcttagttcttacttactatcaagcaatcaagttcaagccatctttatttgcagctcacattaaatggtctaacacttgatgatgtttcacttccccagtatggtgtgaagtgcgattctgttaagtagtttgttacccggcaccaggtgttactgaaatttgagtgggaaatcttagcctgtgattatttgtcccctttcatatcgtgtgcactgcaggctgctgcatttgttcttggcacaaactttggagtttttatttttgttctgaaatgctgaagccatttttcatggtcttcttaagtcttagtgaccctgatcagtattgaacaatgtttggttcaacagatagtacaatagtgtgttcacattagtccttacaggaaagaggcttctgccatgggtgcatctcccagccgtccactagaacaatcaccatcatctagtgaaggagagaatcacagagttaagtatgcctcatatactacgcaaggatttcgcccgcacatggaagatgcagtgagtaatcttgcactcttttaaccaattttatggccataaggtgtttacctgtaagtaaatgtgatcaaacaacaagcttgatttgtacctttcgtattatctagcttgcagttgaactagatctagatgcgaccacgtcattctttggtgtttatgatggccatggaggtttgatcttcattctcatcttttctaacaaatgtcaaacaattcatctgttagaccacttcacgcgttggttaaaatatcatagaagtcacaatcctctataaagaaaggacggcgtttcctattaggaacataataacagttgattcatccttcaatccttcgttctctatctgtacagtcatgctgagttttttacctttttctattcaggagctgaagtagcaatgtactgtgcaaaacgatttcatactatgcttcttgaggatgtagactatatcaacaatctgcccaatgcaattacgtctgtatgcttcaggttattttctacataattatttcatgtactctacatattttgtgcactcatgtttctcaatagtggaaaacggaaggacaagtgttcataattgcaatcattttcttgaaaatatagtaccatttgctggattagcaaacatgaaaatatgtaatcacctgccttcttaattgcagacttgatgatgatttgcaacgatcaaatgaatggagggagtcacttaatccctgtgctaatcgcaattgtctcactaacatttgtgctaatctccaccatttcacagaggtgatatataaacttcgtggttgttctttacacatccaactgcattaaagttaatcatgatcttatttctagttatctagtgcacatattcttatctgcaagaagtatcttgaaggaatgtgtgatatggattccatatttttctctcaagatatgatgtggagttccgagtgatatatttctcatacacactcatcatatcaagcacttgtttaatgtttatggagtcagaatccaaaagcttgttaagttcttgttgtactttagttgttatcctactgcccaaactatggtattgtttgatatgtcactttgttggactcatcatgtctttcttacatttgttcccttcttttatggagtatggacatcatttttttctctggtggcattgcacacctttttagatttttttatttcgtggaactattgaattgttagttttacacttcagctggattgttgccccctcaggattacgttccgccgtcatatgaaggtagcacagcatgtgtggtaatcattagaggaaatcagatcattgttgggaatgttggtgattctcgttgcgtgctttcaaagaatggtcaggtgcgtgacttgtttcttgtgaaatgtcttattgcctggatcttctctcttgccaaatgcaataaattggtgcctaattattatctttttgtttttctgttgtgtccataggcaattagtttatcctttgatcacaaaccacaccatgaagctgaacgcgaaagaattcaaagagcaggaggacatgtatttttgcaaagaattctaggaatgttagccacgtccagagcgattggtataattttatcttattttcttttggctgtttgtataaaatctgtagcattgtaattgacattttcgttactaccattgcaggtgattttgcatataagcagaacagaaatatgcctccttcacagcaaatggtgacatgtgttcctgacattcgcgtcgtaagtgtaactatgccattttagatgactatatatttgttttcttggtctgatcagatgtccttatttttgttaggaaaacataactgatgatactgaatttcttgtcatagcaagtgatggtgtctggtaggtcctctgctataaaattagtaaaggttatttgttgttttatgctagctcctgattaaataaatctcttgcagaatatatccactccaatgacaattaacttgcttctaagacagtattgttttttccacaagggtttgtacatttgctttaattaaaattggatgtgacctggactggtatattatctagttcaccaccatgtgtagttatgaatgtttttacgtggtgaagatttttgaattcttattttgagttaaatgttatgtccttggagaggctgaatctactgaaaagagagacatctgtcattccctgcactagctggggttttatagtattcagacaattatttaatttgatggtttggtatctgacaggcttaataagttggaaatgactgcaacgaccactggtcaccttatatatctgacttatactgcaagatcattcttcaagaaccatctcactaaatgaaacatttacacctgtaggaattgtgctaagatgtatcagtgttaatattgataaatgacagcaatctaccatatattatcacaatctgatatacgtttcccattggcaatgctatgtctcttccttttgtttcttctacagttttattcatattcacatagtaaacttaaatacatttttttttctctttcagggatggcatgagaaataacaatgttgttcagtttgtgcgtcaggaattacgtccggtgagtccttcctatttttctctacatgtcatgaagtaatgcattaaaaaaacacatggcttttgctttgaaattatgttagcaggctggttctgtgatgagaacacgaagtgtagtagttatatgcttatttagttggttgtaagaaccttgttatcttggactccaccaaaagccgggttgatatgatccatttgtctaaaaaacgcatcctctctagaagttcctttcatgcatgcactcttaaattaaatcaatgaaagtttactccagttctgaacacatgtgcatggatctgcttcgttttgttatcaagagattgaaatctaaagtctacatatgaagatcgtaggatgtttttcgctgttcattcatttgttgctagaattgttattatgccctttggcctgtgccttgacgtatgcatgttaaccaacacagggggaggaaaatctacgcgagacttgtgagaagcttgttggtcattgcttgcactcaaatgacaacgcgactgccatactggttaagttcaagcccattgaggaggaccccgatgaagttgccagtgccagggatgaacatcaacacaaccccgagggcggtgatgaaaaacttgacatcaacaatgacaatgactaatcactggccctccaatttagtgcaccttagttcttgcaaggatcttagctagctgcagggagttttggggttagatcaggaaaagaaggtccagagagtcctatttttgtccaaggcgacgttgatgggatgccactaagtacgtagtatgatgccatcagtccattagcataggagacagtccgttacatttgtgcctgagagtcacttggattcgtttaacgcacctttatcattgtactctggattactgaagattttggtcgatgtagtaatactc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001053917.1 RefSeq:Os02g0606900]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 2]]
 
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[[Category:Chromosome 2]]
 

Latest revision as of 11:31, 29 March 2017

The rice Os02g0606900 was reported as OsPP2C21 in 2008 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os02g0606900 <=> OsPP2C21

Function

  • The protein phosphatase 2Cs (PP2Cs) from various organisms have been implicated to act as negative modulators of protein kinase pathways involved in diverse environmental stress responses and developmental processes.[1]
  • Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis.[1] [2]

Expression

  • The expression analyses from the researchers provide evidences that PP2C genes in different subfamilies might play different functional roles in distinct signaling pathways.[1]

Knowledge extension

  • The reversible phosphorylation of proteins is a fundamental mechanism by which living organisms modulate cellular processes including cell cycle events, growth factor responses, hormone and environmental stimuli responses, metabolic control, and developmental processes.[1]

You can also add sub-section(s) at will.

Labs working on this gene

  • State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, Shandong 271018, PR China
  • Biology Department, Millersville University of Pennsylvania, 288 Roddy Hall, 50 E Frederick St, PO Box 1002, Millersville PA, 17551-0302, USA
  • Department of Chemistry, Fudan University, 220 Handan Road, Shanghai 200433, PR China
  • Institutes of Biomedical Sciences, Fudan University, 130 Dongan Road, Shanghai 200032, PR China
  • Centre for Forest Biology & Department of Biology, University of Victoria, Victoria BC, V8W 3N5, Canada

References

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Xue T, Wang D, Zhang S, Ehlting J, Ni F, Jakab S, Zheng C, Zhong Y. Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis. BMC Genomics. 2008 Nov 20;9:550. doi: 10.1186/1471-2164-9-550. PubMed PMID: 19021904; PubMed Central PMCID: PMC2612031.
  2. ↑ Umezawa T, Sugiyama N, Mizoguchi M, Hayashi S, Myouga F, Yamaguchi-Shinozaki K, Ishihama Y, Hirayama T, Shinozaki K. Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis. Proc Natl Acad Sci U S A. 2009 Oct 13;106(41):17588-93. doi: 10.1073/pnas.0907095106. Epub 2009 Sep 29. PubMed PMID: 19805022; PubMed Central PMCID: PMC2754379.

Structured Information