|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0621600|
| |
| − | Description = Transcriptional factor B3 family protein|
| |
| − | Version = NM_001057214.2 GI:297601337 GeneID:4333471|
| |
| − | Length = 9701 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0621600, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| |
| − | AP = Chromosome 3:24327741..24337441|
| |
| − | CDS = 24327741..24327849,24328149..24328156,24328280..24328288,24328398..24328469,24328608..24328727<br>,24329268..24329688,24329761..24329915,24330091..24330255,24330452..24330455<br>,24331369..24331429,24331563..24331665,24332052..24332484,24332608..24332750<br>,24333238..24333370,24335197..24335206,24335482..24335605,24336225..24336642<br>,24336783..24336973,24337199..24337441|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008396:24327741..24337441
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008396:24327741..24337441
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggccccattcctggcttcccccatacgccttcacccctgtcctctcctcttctcccaccctcacctcttcggatccgactactttgcctttagcgtaaaaggcagaggtgggccctcaacactgtctcttccttccttctttccctctgctcatctactgctctcacttgctctcttcttcttcttgtgcattcagagtaaccacaggatgagcaagtctggttgtgagagatgcagaggacggggtttttgggatacggatgatcaggacacgtatttcttcaaggttatgattggtggtttccgacgtcaaatgaccataccatacaagtttgcagaaaatttcagagatcagatccaaggaacaatcaaactgaaggcacgtaatggtaacacttgcagtgtccttgttgacaaatgttcaaataagttagtccttacaaaagggtgggctgaatttgccaactctcatgacattaagatgggtgacttcctggtattcagatacactggcaattctcagtttgaagttaaaatctttgatccaagtggttgtgtgaaagcagcatcacacaatgctgtgaacattggccagcatgcccaaaacatgcaaggagaccctattgaaattttaagctgctctgatgaacatctgcgagcgcaatcgctaacaaccgaaaggcaaaatcaacctgaaaaggatgtcattgacaattgtaacaagaagatgaagacagagcatgcttcttcttcagaagatgatcaggaaacacctactgctgaggtgcacaggatgaaagtagaagagatggtccgagctattcattccaaccacccagtttttgtggctgtcatgaaaaaaagcaacgtcactcgacaaccttgctatgtggcaatctccaggaaatatgccaatgaatattttccaggaggggaccaaatgctaacgcttcaacgacatggcaagaggtggcaagtgaagttttgtatcagcaaacgcaaattgagaatgctttcaaaggggtggagaaaattcacaagagacaacgagctgcagcactgggctcctctggctctgttcatcactctgtttttttcccctcattttcgaaagatgaaaaagtgtggtcagaagatgaggaagctgaacacaagatccacggctagggatgatcaagaaaagtatttcttcaaggtcatgattggtgacttccataagagaatgaccatacctgataaatttgcacgccacttcaaaggggtgatatcaaaaactattaagctagagcctcgcagcggttacactttcgatgttcaagttacaaagaagttgaatatattagttttgggatctggatgggagtcatttgttaatgctcatgacttaaacatgggtgacttcctggtgttcaaatacaatggggactttctgttgcaagtgttaatctttgatcctagcggttgcgagaaatcgacttcatgttctatggaaaatgctattgatcatgttggacaagggtggaaagaacacaatgatatctcaacaagttatcatgatcaaccaaaaggaaataaacattggatgcaaaaggatagctcatctaaagggaataagattggcaataccaggtcatcaaacaccccatctaagttttcaggttgcattctccctcgtggaacctgtcttcctgtggttcaggagaagaagatgaaagaaaagatccaagctatacattccaaaaccccaatgtatgggaatgtcatgacaaaatgcaatgtttctggaagcccttgtgttcttgaaataactcaactatatgatgatgcgtatcttccattcaataatggccaagagctgatgcttcgacaccgagacaagagttggaaagtgcggttttacagattcaagaacaaatctagaaagctcactcaagcaagttcactttataagatgagaaggcctggtgcgagatgcagggaaggacatgcacatttcaacgggaaccacatagatgggcaatataagaatttcttcaaggttatgattggtcgctttcgtgagagaatgatcataccaaacgaatttcttcaatatttcaggggtaaaataccaagaactataaagctgcaattacgcgatggttgcacttatgatgttcaagtcactaagaatttgggcaaaatatcccttcaatcaggatggaaggcatttgtgactgctcatgacttgcaaatgggagattttctagtattcagttatgatgggatctccaaattgaaggttctgatctttggtccaagtggctgtgagaaagtgcattcacgctctacattaaaaaatgctacacattgtggtgagaagtgggaagaacccctgcacatttcaagcaattcgcatgatcttcctgtgaaatcaccacaaaatgtaagcaaatctgagaaacaatgggatagctcagaacaagaaaacgacaccgcgaatatcgaagaagttgcattgcaaggagatgatctccaagggcatccggttctgaattgcatcctcccaaagcacacccgccttacagatatgcagaagcagcagctggaaagcaaagttggagctattcattctgaaatccccatctatgggtgcatccttaggaagagtcgcgtccacggaaaatctcaaaccgtagacatatgtcgagaatatgcagatgtatatcttccattcaaggagttaaacatgacgcttcaacgtcatggcaaaaattgggaggtgctatgtcgcactaaggatacaagaaccaaaaggctctcgacagggtggagtcggtttgcacaggaaaacaatttgcaggtgggagatatctgcctctttgagctactgaagaagaaggaatactcgatgaatgttcatatcattcccaaaaaatga</cdnaseq>|
| |
| − | AA = <aaseq>MAPFLASPIRLHPCPLLFSHPHLFGSDYFAFSVKGRGGPSTLSL PSFFPSAHLLLSLALFFFLCIQSNHRMSKSGCERCRGRGFWDTDDQDTYFFKVMIGGF RRQMTIPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDI KMGDFLVFRYTGNSQFEVKIFDPSGCVKAASHNAVNIGQHAQNMQGDPIEILSCSDEH LRAQSLTTERQNQPEKDVIDNCNKKMKTEHASSSEDDQETPTAEVHRMKVEEMVRAIH SNHPVFVAVMKKSNVTRQPCYVAISRKYANEYFPGGDQMLTLQRHGKRWQVKFCISKR KLRMLSKGWRKFTRDNELQHWAPLALFITLFFSPHFRKMKKCGQKMRKLNTRSTARDD QEKYFFKVMIGDFHKRMTIPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVL GSGWESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCEKSTSCSMENAIDHVGQGW KEHNDISTSYHDQPKGNKHWMQKDSSSKGNKIGNTRSSNTPSKFSGCILPRGTCLPVV QEKKMKEKIQAIHSKTPMYGNVMTKCNVSGSPCVLEITQLYDDAYLPFNNGQELMLRH RDKSWKVRFYRFKNKSRKLTQASSLYKMRRPGARCREGHAHFNGNHIDGQYKNFFKVM IGRFRERMIIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVT AHDLQMGDFLVFSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGEKWEEPLHISSN SHDLPVKSPQNVSKSEKQWDSSEQENDTANIEEVALQGDDLQGHPVLNCILPKHTRLT DMQKQQLESKVGAIHSEIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELNMTLQ RHGKNWEVLCRTKDTRTKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIPK K</aaseq>|
| |
| − | DNA = <dnaseqindica>1..109#409..416#540..548#658..729#868..987#1528..1948#2021..2175#2351..2515#2712..2715#3629..3689#3823..3925#4312..4744#4868..5010#5498..5630#7457..7466#7742..7865#8485..8902#9043..9233#9459..9701#atggccccattcctggcttcccccatacgccttcacccctgtcctctcctcttctcccaccctcacctcttcggatccgactactttgcctttagcgtaaaaggcagaggtgcacagtaaaatttgtttgcgtttggaggtgaattgtgagaactttaccttctccaatgcaaaacggagtgatcaattaatatatgattaactaatcttttctgtattttttttaaaaaaatatatcatttaacagtttagaaagtatgcgtgtggaaaataagagagggaatagaagttggggaacagatgctaaaagaacacaccctaactcaatatttaaccagttagtgcgatatggttacatcggaaccggattccctgacatgaactgctccttgacgtggtcactgataggtgggcccgtgagcggtagggcccacgtgtcactcaccacgtccccgtgactccacgttagagggatcccaatcccgttacatcctttcttttcactgtgctgaagctgaaacgtctcttgtcttgtttagtcaacactggtgagtgcaacattgctcaaaaactgacgacactgcactcttgcttgcgtcgcccacactccactccacgccactcctctttatattcatcctcttctcctcgctgcagtctcttccttccttctttccctctgctcatctactgctctcacttgctctcttcttcttcttgtgcattcaggtaatttctttctttgcatttcaagtcgattgctgcagacatcttttggaaaaaaaattcaattcgtgtcacagtttgtatgcgaaactgtagttttatttatttttgtcaccattttggtacttctgttttggacagagtaaccacaggatgagcaagtctggttgtgagagatgcagaggacggggtttttgggatacggatgatcaggacacgtatttcttcaaggttatgattggtggtttccgacgtcaaatggtaagcaactctcgtttatttctactacctgttggtttcttggcaaatatgttagtagaaacttgtaaactacccatctcagaaaacaaaacaaaacaaaaaaaccttgtgatgtttcccagtttggcacatgagagattagcatttgaagattgtaatttttcactgaaatatggttcatcctgattcttgtcaaaacatacatgactctgactgaattaaccgaacctcttgagaattgagtagccaccacttgataaaagtaaacattttagtcttccacaacagttgcatattttgcatttgtccaaaagacaccgagatgaaaacacatgctagagacattcacattgttcttgttatttttttcccctctgcttacttatcataaactacaggactacataaaacattgatttttttttggtgatgtttagaatgaggcagaagctcctgctcaatcaaacattatctttgtgttttttttctccttattacaaaagaactgtaaatggtttatttttattcttgttgttgcagaccataccatacaagtttgcagaaaatttcagagatcagatccaaggaacaatcaaactgaaggcacgtaatggtaacacttgcagtgtccttgttgacaaatgttcaaataagttagtccttacaaaagggtgggctgaatttgccaactctcatgacattaagatgggtgacttcctggtattcagatacactggcaattctcagtttgaagttaaaatctttgatccaagtggttgtgtgaaagcagcatcacacaatgctgtgaacattggccagcatgcccaaaacatgcaaggagaccctattgaaattttaagctgctctgatgaacatctgcgagcgcaatcgctaacaaccgaaaggcaaaatcaacctgaaaaggatgtcattgacaattgtaacaagaagatgaagacaggtccatcaactattcccctttattgattacatttttaaacatcatgcataatctttttttttttcagtacagagcatgcttcttcttcagaagatgatcaggaaacacctactgctgaggtgcacaggatgaaagtagaagagatggtccgagctattcattccaaccacccagtttttgtggctgtcatgaaaaaaagcaacgtcactcgacaaccttgctatgtggtaagattttgcatgcttaacgaatgcaaattttctgtgaactcacaactatacatactatcttctgtatgagtaatttgttattatgagatgaaccacatgccatttggtttagttgtcacaatttgccttttgaattttcaatctaaaatatttcaaatacactctgaattaggcaatctccaggaaatatgccaatgaatattttccaggaggggaccaaatgctaacgcttcaacgacatggcaagaggtggcaagtgaagttttgtatcagcaaacgcaaattgagaatgctttcaaaggggtggagaaaattcacaagagacaacgagctgcaggtcggtgatacatgcctgtttgaactgctaaagaacgagaacccgttcgcaatgaacgtccatatcatcagaaaatagtgatcactgcctgtataatctctttatgttggtgtgaaacatatgtaacattccatctgtctaaaatctattctaatttgctagtagtctgacggttaacaccatgcgttgcttgcagcactgtgagttgtgttggtgcaaatgtacaacatgcctcttgggctttagtgctatgttttgctagtttgccagaacatttcatgattttgttagttgatccactgtaaagttcatgctaattcgtacatgatcgtatcaagtcgcctgttcctagcttgttcttcatgcattatttttccttataaatttgttcagcttaaaatgctttagggaattgttgattgcatgaaactcacggtaatctggcaaagatataattcccccgttctgttggggccttgatgttatgaatattaaagtgatttagtaacattttatatactgatataaaatgaagggaaaaagaactcccgtcttaaccttactgcccacccatggaaatgtacaatactgagctgaattgtttatcctgtgatcataaaacttgagttccttgttcccattgattgtttttttccccaatatttcgtacaaatccatgaaaagacattgaaatgtaaatgtgcagacttccaagaattttactcctacaggattacatcacaggggctcagttgaaaattatctccatggcttatctgaagaagtagctggagttacactgttggtatttatggctccccattggaattacaccagagaatatttaacgctcatactttaaggctgctaagccatttgaagtttggaatttggacagtctagaaccctgttggccttcttccatttcccccataaattttcacctcctactactcctgcacaactcatctctccctttctcagcatccataatcaatctcaggttatgctcttgtttccggttggtgaatcttggtacctgcatttgcatacaggatatccattgttcctgcaactttattttctctctgcattcttcatttcttcctgcaggggctcctctggctctgttcatcactctgtttttttcccctcattttcgaaagatgaaaaagtgtggttgttctcttgtcgttaaataattctctcatggaaagaaaggcaggctaatcaaatacgatcttatagcaagccaaatgtagtagccaatacctaagtaggggctaaacttgttttgtgatgtgtaggtgtggtcagaagatgaggaagctgaacacaagatccacggctagggatgatcaagaaaagtatttcttcaaggtcatgattggtgacttccataagagaatggtaagctatctcgactaatgcacaagcatgaatactttggtaagttatctctactgaagtaggcaaaacatgcttaggctaaattctgtcagttttgttttctactcagtgactcaaaaaggccaaagcatgatctagatatacttgtgctagtgcatcatgagatcagggaaacagcacattttggtgcttcaccaaaagtgttgcaggggtacaactgaatagaataaagtttttatttttttgagaaaattgggtctttcagttactctttagtcggccatatgactctttgtagcaaaagctttcatactactttctcacctctaaagtgctgttttttttttaaaaaaaaaatcaatatcgtatctaccttgttgctgcagaccatacctgataaatttgcacgccacttcaaaggggtgatatcaaaaactattaagctagagcctcgcagcggttacactttcgatgttcaagttacaaagaagttgaatatattagttttgggatctggatgggagtcatttgttaatgctcatgacttaaacatgggtgacttcctggtgttcaaatacaatggggactttctgttgcaagtgttaatctttgatcctagcggttgcgagaaatcgacttcatgttctatggaaaatgctattgatcatgttggacaagggtggaaagaacacaatgatatctcaacaagttatcatgatcaaccaaaaggaaataaacattggatgcaaaaggatagctcatctaaagggaataagattggcaataccaggtcatcaaacaccccatctaagttttcaggtaataactcagattatcaaaactttatattagcacaaatgtacaatgattgcacataagtcatacttttgggggaaaggagaaatgttatcttcagaagttgcggaaattcatttgtgccaggttgcattctccctcgtggaacctgtcttcctgtggttcaggagaagaagatgaaagaaaagatccaagctatacattccaaaaccccaatgtatgggaatgtcatgacaaaatgcaatgtttctggaagcccttgtgttcttgtgagtaacagtatctcttgaatggatatttaatttatattcactgtgcatactatttttaaaaatagacaatcatgcagtcgagttgtttagcattgcaagtacattgtgagacactgcttcacagtcctttgtttgttccaattcctgaactaattctttttggcccttgatggaaattctgtttctaaaaaagaagttgtatgaatcctacatgggcactgttttagatttatattgagatgtttaatgggttagatttttgaaggtattaagctagtcaaatttatccatcgtacattgttaagcccccataaatctgatttattcattctccacctaatatttaattaattaatgtgattacattgcagaacctcggcatgagatcaaacacaatattcccccgtataagttgcaaaaatagtagaacatatatttatttttttaaccattaatactaacagtctttctcttctataactaggaaataactcaactatatgatgatgcgtatcttccattcaataatggccaagagctgatgcttcgacaccgagacaagagttggaaagtgcggttttacagattcaagaacaaatctagaaagctcactcaaggttggaaaagatttgtgcacgacaactacctgcggatgggagatctatgtctctttgagatattaaagaataaatacacaatgaatgtccatataattcgcaaatgctaaaatccgatctgccttgttttttcctggagtacacaaaaagcttgcgcacctttgtactaagatagaaagggttccaatacaacaatcggatgtgccttttatgctgttggtggcgcttctgaatattttgtaagcttctgaatatgatgcacaatttttttttaagttgtgatgaaattggctattgattcgattggacgtttggtgaaaccatgaattggcttccaaaagcttaatgaggtgtcatcgaacctactcactattattgtccatttcagctcgttcatttccagttcttatctcttctccacagggacaacagatcattgtttctatagagtagttatattttgcgaaagaatgggacttcatctcatgcaaacaaaatgaatataatggacaaaattcctgatgagctgatggcatgcagaaaaacatgcttgcatttgtattcaatagttgaatgctcatgctatgttacagataaaagaaaatatggtataaaatttcctaaagtaaataaaaagtatattttccgtgaaatgtgttacctaaagtaatttgattttatacatgtctttccattagatttgatttttttaatactaagaatttcaagagctaatttacaacattagacaataaaagtaggcggagtgatcatcagagtcgctgtcatcactactaccctcttttaaaagagtgtgttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattagaatatgatgtgatatgactttgccctaagactctacatgcgattctacggaatcatgagaaaactctagcataaaagagagatccactcaaataatttttttagtggcacggatattaaaaatttaacttccgtatattaaaataaaaaatgagtagaatataaagacttttagatatggatacggttattaacaaagtagataaaattaaataggagagggatggtggggaaattaaatggtgaaggattgtgattggttgggaagaaaatgttaagttgagaagttgctatatttttgataaattttgaagtctacaaactattatattttggaatggagggagtaagaattgggtgttataaatatttatgactcatctacttgactgacatttggatccagagactaaattttagtccctgtcacatcggatgattggacactagttagaagtattaaacgtagactaataataaaactaattgcataaatgagactaattcgcgagacaatttttttaaagactaattaatccataattagcacattttttaccgtagtatcacataggctaatcatagattaattaggctcaataaattcgtctcgcgaattagtccagagctatggaataagttttatcatttgtctacgtttaatacttctaattagtgtcaaatatccgatatgatagagactaaaatttaatccctaagtcagacaccacccaactctgctccctccactgaaaatggattaatgcagaagtgcagagatgcaagtgcgtatttaatgcagctagtgagtgaatggaagcctaatattttattaataggcattaagaagctgtaggagcacttggttctcctgctgaaacaatttctgcttttcatatgcagcaagttcactgtaagcttgatacagaatgcttgcgtctagctggttgtaagaagaactaagaaaggtaatccttgatcactcttacatccttccgaccttccgtgctttccttttgcttagttgcttcacctttttttattcttgtgtgattttacagaaaaggatttggcgcataccccctgatatctgacaaaatctgaatgtttttttagcccttttcctgtttgctaaaacttcccccaaattttacttggataacgtcatttttctttatgtatgtgtagttataagatgagaaggcctggtgcgagatgcagggaaggacatgcacatttcaacgggaaccacatagatgggcaatataagaatttcttcaaggttatgattggtcgctttcgtgagagaatggtaagttattttcaattccgatatgttcttgggtaatttgtatctattcaactccaaggcttagtttaatctaaagcaaacatataggaaaaagatggagctagtgtagttaaatatttctaaattcaatatctcagtgtgcgcaagcagaaaattagctaaatacttttgtgattagtgctgctttaaatataataattatcatcttgttaataaaactctaaacatagggaaaaagttctggtctggtgagtggtgaaagtaaaaaaaaagatttacaaaggatcgaagtatttagtttcgtttcacaagtttgcttgtgcacaaacaggtaataaaacatttattggtttcaaaatagtagtaattgatagcaacggtctagtctattacttctatgaattaaacatagttaattttgtctgttgagaaactctaggtagaaacactttccgtttagtgtttgaatgaaactagttttcactacaatgtgttaatcctgttttttttaagtgagttttgttaataaaaaaaaaactacactcctgaaatagcaaaaacttccatactcctcatgcataagagttgttctttgtgtttactctgttttttttttcagatcataccaaacgaatttcttcaatatttcaggggtaaaataccaagaactataaagctgcaattacgcgatggttgcacttatgatgttcaagtcactaagaatttgggcaaaatatcccttcaatcaggatggaaggcatttgtgactgctcatgacttgcaaatgggagattttctagtattcagttatgatgggatctccaaattgaaggttctgatctttggtccaagtggctgtgagaaagtgcattcacgctctacattaaaaaatgctacacattgtggtgagaagtgggaagaacccctgcacatttcaagcaattcgcatgatcttcctgtgaaatcaccacaaaatgtaagcaaatctgagaaacaatgggatagctcagaacaagaaaacgacaccgcgaatatcggtttgtcaatttctctaccaagtcatcaggctatatatctgatagtttcacaatgtcaaaaacctacagtagtagtgattgtgcatttggacttcactggaaggttttatgattttttttctcctttttaatttctttagaagaagttgcattgcaaggagatgatctccaagggcatccggttctgaattgcatcctcccaaagcacacccgccttacagatatgcagaagcagcagctggaaagcaaagttggagctattcattctgaaatccccatctatgggtgcatccttaggaagagtcgcgtccacggaaaatctcaaaccgtagtgagttaaaatttcttttcttcttgaatgagtattccgttttcacataactgcgggtctattgagaagttggttgtttttcattgcgatatatatatatatatatcctagtattgttctttatctttgttcttattgctgatgttttacattcgcaatgaaaatactggattatacatacaattggtaatgttattataagaacccttttctctctgtaatcaggacatatgtcgagaatatgcagatgtatatcttccattcaaggagttaaacatgacgcttcaacgtcatggcaaaaattgggaggtgctatgtcgcactaaggatacaagaaccaaaaggctctcgacagggtggagtcggtttgcacaggaaaacaatttgcaggtgggagatatctgcctctttgagctactgaagaagaaggaatactcgatgaatgttcatatcattcccaaaaaatga</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057214.2 RefSeq:Os03g0621600]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
| |
| − | [[Category:Chromosome 3]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
