Difference between revisions of "Os04g0177300"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
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GeneName = Os04g0177300|
 
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Description = DEAD/DEAH box helicase, N-terminal domain containing protein|
 
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Version = NM_001058703.1 GI:115457135 GeneID:4335086|
 
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Length = 6203 bp|
 
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Definition = Oryza sativa Japonica Group Os04g0177300, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
 
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AP = Chromosome 4:5246808..5253010|
 
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CDS = 5247120..5247242,5247333..5247431,5247542..5247613,5247714..5248287,5248371..5248483<br>,5248638..5248737,5248855..5248977,5249064..5249131,5249257..5249406<br>,5249511..5249654,5249893..5250084,5250506..5250590,5250688..5250832<br>,5250934..5250940|
 
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GCID = <gbrowseImage1>
 
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name=NC_008397:5246808..5253010
 
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source=RiceChromosome04
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008397:5246808..5253010
 
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source=RiceChromosome04
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>cttggagagcccccaagcactcttgtctccgttctaaaaccataccagaaggaagctctgttctggatgtctcaattggagaagggtattgatggtgatcaagccaaaaaaacccttcatccctgttggagtgcctacaaaatcgtcgacaagagagctcctgcagtgtatgtcaatgttttcactggcgaggcaacaacccagtttcaaagtgtaactcagtcagcaagaggagggatactagcggatgcaatgggtcttggtaaaactgtcatgactattgctctaatactatcaaacccaaggggggagttagaacaagataagaggggtactagagatcgtgacaccaaggcacaaacttcgagatcctctgtaagaggaggcacacttataatctgtccaatggcattgctaggccagtggaaggatgaattggaggcacattcaacaccaggagctctttctgtgtttgtctactatggtggcgacagaaccactgacctgagattcatggctcagcatagtgttgtcttgacaacctatggtgttcttcaatcagctcacaagaatgatggcagcagtatctttcacaggatagattggtatagagttgtgctcgatgaagcacatacgatcaaatctcccagaaccaaagcagcacgagcagcttatgaattaacttctcattgcagatggtgccttacgggtacaccattgcagaataatttggaggaccttttcagtcttctttgcttcctacatgtagaaccatggggtgacgcaagttggtggaataagctgattcaaagaccttatgagaatggtgatgagaggggattgaaacttgtcagagctattctgaggccactcatgctgaggagaacgaaggaaacaaaagacaaaatgggaaatcccatactagtcctcccaccagctaatattgagattgtggagtgcgaacaatctgaagatgaacgcgatttctatgaagcgcttttcaggagatcaaaggttcaatttgataaatttgtagcacaaggcagtgttcttaacaactacgctaatattcttgagttactccttcggctaaggcagtgctgcgaccacccttttctagtgatcagtcgagctgatactcagaagtatactgacctcgatgagctagcacagaggttccttgatggggtgcaacgtgattccgcgagacgcagtgcgccaccttcacaggcgtatgtagaagaggttgttgaagaaatccgccagggcgcaactactgagtgtccaatctgccttgaatcagcttctgatgatccagtgctcacaccatgcgcgcaccggatgtgccgtgagtgcctgctctctagctggaggacgccttctggaggaccatgcccactttgccgaagccccattaccaaatctgagctgatcacattgcctagtcagtgtcgattccaggttgaccctgagaataactggaaggactcatgtaaggtgataaaactcatcaagatcctggagggccttcaggagaagagggagaagagcattgtgttcagtcagttcacttccttcttcgatcttcttgaggttcccttcaatcagaaagggatcaaattcttgaggtttgatgggaagctcagccagaaacacagagaaaaggttctgaaggagttcagtgaaagcaaggacaagctggtgctacttatgtcactcaaggctggaggtgttggacttaatttgactgctgcctccaatgtgttcctaatggacccatggtggaatcctgcagtggaagaacaagctatcatgcgaattcaccgtatcgggcaaaagagagcggtccaagtaaggcgcttcatcgtcaaggatacggtcgaggagcggatgcagaaggtgcaagcgtgcaagcagaggatgatctctggggcgctgaccgacgatgaagtccgctccgctcgtatcgagcaactgaagatgctgtttacatga</cdnaseq>|
 
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AA = <aaseq>LGEPPSTLVSVLKPYQKEALFWMSQLEKGIDGDQAKKTLHPCWS                    AYKIVDKRAPAVYVNVFTGEATTQFQSVTQSARGGILADAMGLGKTVMTIALILSNPR                    GELEQDKRGTRDRDTKAQTSRSSVRGGTLIICPMALLGQWKDELEAHSTPGALSVFVY                    YGGDRTTDLRFMAQHSVVLTTYGVLQSAHKNDGSSIFHRIDWYRVVLDEAHTIKSPRT                    KAARAAYELTSHCRWCLTGTPLQNNLEDLFSLLCFLHVEPWGDASWWNKLIQRPYENG                    DERGLKLVRAILRPLMLRRTKETKDKMGNPILVLPPANIEIVECEQSEDERDFYEALF                    RRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFLVISRADTQKYTDLDELAQR                    FLDGVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLESASDDPVLTPCAHRMCR                    ECLLSSWRTPSGGPCPLCRSPITKSELITLPSQCRFQVDPENNWKDSCKVIKLIKILE                    GLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDK                    LVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRAVQVRRFIVK                    DTVEERMQKVQACKQRMISGALTDDEVRSARIEQLKMLFT</aaseq>|
 
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DNA = <dnaseqindica>5769..5891#5580..5678#5398..5469#4724..5297#4528..4640#4274..4373#4034..4156#3880..3947#3605..3754#3357..3500#2927..3118#2421..2505#2179..2323#2071..2077#tttctccatccccaatcctctcctcctcctcctccgcctccgcctcaatcccttcctccatccacccgcctccgttgttctcgccggcggcgacgacatgcacggcgactggccggagtcgccgtcccaggaggtgctctacgccgacgagatcgccgccgtccgcgcggttcttggcgcgggcctccccgaggcccgcgtcgtcgccgcaatctcccgctgcggaggcaacgccgagcgcgccatcaacgcgctcctcgatgacgccaccgccggcgtcgaggacaaacccgagcccaagaagggtaaaggtgccaagacggctgctcctccggtgaaggcggaacgcgacgctggtggcgccgccccgaagccgccgccgcctccggtgaaggttgaggtcctcgacgacgagcccctggggagccaagaatcgaacggctgctccgcgagggtcaagaaggagcgggaggacgagctgctcgtcaaagcgccgcctccgatgccggatcgggtcaaggaggaagacggcgtcgcggccaagcgaggcgcggcgacggcgaacgccgccggcataagcctggtgccgaggccgaagaagaggtctcgcgtgcacgacgaggcggacaccatcgacctcacggcgacccacccggtgccgtacctgaacccgaggccgatccgggcggtgccgccaccggaggccatggagatgctcgagtcgcggcgtgtgcgtgccaggccgcctccgccgtcgagtgatctgaggatggtggtggcgccgcctgatgccgagttcggcgagttccccgaggagcgcgactggttcctcgtcggcaggtcgtacgtcaccggcctgtccaccaaccgcgggaggcggaggctggacgccggcgagctcgtccatttctcgttcccctcattggagaggacctatggtgggatcaaggtgtcgaacaagaaggcggctgctttggcggagatcgtgcgcttctccaccaatcgagctggagaggtttgctgctcttgtgatgctatcatttcatttctaataatgttgttggtaatggttgatttatttgtgagaaattgtattaatttctgttatttttcattgttattgtagattgggaagctatctacagaatggaccaagtgcctcgtgccactggtaagctcatccaaggtgaagattcaggggaagattgtgtttcccacggtggaattgagattgatgcaggagattttgttgtatgttaggtaatggttgattatgcatgtttgcttttcttcttttttttagtttgtgtattgtgtcattgtgatgatttgtgttaaattgttgatggtaatgttttttttttttccttttctgcagcttctacatccaccgttctgtattcaccgcaagcggcaacaactcatcatgggacctgcttgctcctgcaaatgttgattattccactaaccctctttacaggctgttcagattgctcaagctaagggcattcaccaaggtagcactcatgtcaattccctgaaactcttcagttcttgtagtgctcttgatcctgatgattgtatatgctaatgcttgtgtcatgggcaggctgatatcactcctgaggagcttgctgcaggaaagagaccgcggaatctaagggtgagcttcaatttctcttgccaatcgtgaactgtgattatttgttcaatcgtatgtctctgtagcatgtagtacagaagagcaagcctttgattaaatatacttaattgattgctaaaacaaaatgtacttcgttgtggcattgatctaaattactttatgaattgttaccgtgataatttctgctagcatgtaatatctttttccgagttatgtgctttttgttgatctttttgttttggatacatgaactagggtgatgacaatgatgaagatgaacccatggctatagttggattggaaaaccgacgcacagctggccaaacatttcctgagcaaggcactgatgagcaagctatttcagaggctgcattaaacaaaattgttggcactgctgaaacatatgacttggaggtaagaacaagacctctatttgattgccactctgcactatcggaatgtttgtatatgaacaatgttatgattttaaacaatctgtggaatacaggaagcagagcccccaagcactcttgtctccgttctaaaaccataccagaaggaagctctgttctggatgtctcaattggagaagggtattgatggtgatcaagccaaaaaaacccttcatccctgttggagtgcctacaaaatcgtcgacaagtatgttccttcagtttcatttgcatagttgcatcgaaatgttaattaggaaaatgtccagaactaaatattcacaagttgtaatgtttgtttccaggagagctcctgcagtgtatgtcaatgttttcactggcgaggcaacaacccagtttcaaagtgtaactcagtcagcaagaggaggggtaagtttgttttgttttaagggtcactcgtatacgcattgtaccttgtttaggctgtacatagacagtattatttttttaatgacaattctagatggtagtgttctgctttccctgatttgttttgtagtctcattagattgcccaatgcagcattatatgcttttttaatattaccactagaactttaatataaacaaatgaaatggttgcttttgcatgcttgatgaacactgcaatggttgctggggtttacaaactttgaagaaatggttgcttttgcaatgctttctcactttccgcacttttttctgaggaagttgtatatatgcatgtttttcaggggaaatttttgttagaatatgaatatttgcatctgcctaatctgatggtgctatatgtgtcatctcttgctttgcagatactagcggatgcaatgggtcttggtaaaactgtcatgactattgctctaatactatcaaacccaaggggggagttagaacaagataagaggggtactagagatcgtgacaccaaggcacaaacttcgagatcctctgtaagaggaggcacacttataatctgtccaatggcattgctaggccagtggaaggtaagaaattatatctatgcttaccattatattgtacttttccggttttatagttgtattttattttgcttgctttcaacttgagaacaattgaaaggggaaccttttaggtttgtctttcttttgtcttcattttttccagccttgcattttcaagcagcttgtttgatcctttttctagtttctgctaggaacttttgatttgcaagactagtaatgtgatcattgccctttgcaggatgaattggaggcacattcaacaccaggagctctttctgtgtttgtctactatggtggcgacagaaccactgacctgagattcatggctcagcatagtgttgtcttgacaacctatggtgttcttcaatcagctcacaagaatgtaagagtttggactgtggccttctctacagtgtaatggtcatagctttttttgcaagaagtggtcattatattttaactaacgaaaaatggtactatttacaggatggcagcagtatctttcacaggatagattggtatagagttgtgctcgatgaagcacatacgatcaaatctcccagaaccaaagcagcacgagcagcttatgaattaacttctcattgcagatggtgccttacgggtacaccattgcaggtgagtttgcaaccattgccatttgttattttaatacttcctgttgaactgccagaatttgaagcattgatgaatagttttgtagtttctagtaagctaacttatccgtatcacatttgctgcagaataatttggaggaccttttcagtcttctttgcttcctacatgtagaaccatggggtgacgcaagttggtacgaacattttctggctacataaaatctaatccgatgtgttattgggattgaaaatctgactcaagctgttttgatttcaaaaggtggaataagctgattcaaagaccttatgagaatggtgatgagaggggattgaaacttgtcagagctattctgaggccactcatgctgaggagaacgaaggaaacaaaagacaaaatgggaaagtacgcattttattattttgttactttgtcaacacaataaactgcatcaattatcatctgccatgccttagctcttggaagtactgttgctcacaacaattaaatgcttgtttccagtcccatactagtcctcccaccagctaatattgagattgtggagtgcgaacaatctgaagatgaacgcgatttctatgaagcgcttttcaggagatcaaaggtatctttgttttaaattttcttgttcaggactttgggttaatataagaaattggaaccttcactgaattgttctttggaccattgttcccatagttcttaatgttcatggctgagatttgtttttgtctaacacaaaatggtactcccaacaggttcaatttgataaatttgtagcacaaggcagtgttcttaacaactacgctaatattcttgagttactccttcggctaaggcagtgctgcgaccacccttttctagtgatcaggttagacatggattgcaaagaaatatgctcccttacattttcatcatgtcatttctaactcctgttaaattctaaatatgcagtcgagctgatactcagaagtatactgacctcgatgagctagcacagaggttccttgatggggtgcaacgtgattccgcgagacgcagtgcgccaccttcacaggcgtatgtagaagaggttgttgaagaaatccgccagggcgcaactactgagtgtccaatctgccttgaatcagcttctgatgatccagtgctcacaccatgcgcgcaccggatgtgccgtgagtgcctgctctctagctggaggacgccttctggaggaccatgcccactttgccgaagccccattaccaaatctgagctgatcacattgcctagtcagtgtcgattccaggttgaccctgagaataactggaaggactcatgtaaggtgataaaactcatcaagatcctggagggccttcaggagaagagggagaagagcattgtgttcagtcagttcacttccttcttcgatcttcttgaggttcccttcaatcagaaagggatcaaattcttgaggtttgatgggaagctcagccagaaacacagagaaaaggttctgaaggagttcagtgaaagcaaggacaagctggtatgcacatacatttctagttgtactcttgctttactttctgcaacgtttgattcttgaagcatcacatattctgaaaatcctttttcctgaaaattaggtgctacttatgtcactcaaggctggaggtgttggacttaatttgactgctgcctccaatgtgttcctaatggtaattgaactatacactgtcaatccaatgacctgcaaatacttattcttgcaccaactttctaacctaaatggtcacatcaacttttttttttttttgcattcatataggacccatggtggaatcctgcagtggaagaacaagctatcatgcgaattcaccgtatcgggcaaaagagagcggtccaagtaaggcgcttcatcgtcaaggtaaggacattgacaatcccagtcacaacatctgctcacttttgccagaaagcacagcaaaaataaaaacacattctgtctggattccaggatacggtcgaggagcggatgcagaaggtgcaagcgtgcaagcagaggatgatctctggggcgctgaccgacgatgaagtccgctccgctcgtatcgagcaactgaagatgctgtttacatgagaagtcttgatcatgagtttgcaggatgttgtacagttcatattttgttccctggagacttgctagcattttaggggaaatgatccaatgttttaagggttcggacttgtgaatggggatggaatgggtgtgaaactatgtgcccattcgattttgtggatatatctccattctggtctgaacattttgtatatagtggctcttcttaacatgaaaggcctctaccctttctaaatcgtgatctattgtgctgaaatggctgttggtgttaaccagggagtaaaaaatctctactgaggcttcctttcatcc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058703.1 RefSeq:Os04g0177300]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 4]]
 
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[[Category:Chromosome 4]]
 

Latest revision as of 07:46, 14 May 2015

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Structured Information