Difference between revisions of "Os05g0188500"

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(Created page with "{{JaponicaGene| GeneName = Os05g0188500| Description = Armadillo-like helical domain containing protein| Version = NM_001061376.1 GI:115462482 GeneID:4338016| Length = 857...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os05g0188500|
 
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Description = Armadillo-like helical domain containing protein|
 
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Version = NM_001061376.1 GI:115462482 GeneID:4338016|
 
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Length = 8577 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0188500, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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Please input expression information here.
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AP = Chromosome 5:5406489..5415065|
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CDS = 5406533..5406565,5406654..5406825,5408078..5408190,5408266..5408358,5408523..5408686<br>,5408770..5409006,5409181..5409325,5409424..5409602,5410439..5410584<br>,5410681..5410808,5410883..5411056,5411661..5411822,5411902..5412102<br>,5412175..5412312,5412416..5412616,5412746..5412890,5413017..5413123<br>,5413272..5413412,5413716..5413981,5414063..5414187,5414285..5414551<br>,5414692..5414705|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008398:5406489..5415065
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source=RiceChromosome05
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008398:5406489..5415065
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source=RiceChromosome05
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggacgagaccctagcctccctgcgccgcccgaagcgcgggcggccgccgcggccgcgggaggaccacttggccgccgaggacttcgaggaggagggggaggatgaggaggccgaggcggaggcgctcgcgcggccccagacgaagcgcaagcgcgcggccagcgccgcggccgcggccgcgctggaggaccaaaccctcatcgatattattaaacataatggcaggcttatcagccatgctgtcaaaaaattggtcgaggattatgaatcagatccaaaatctgtgatgtttcagatattagcgatgctatttgaggcttgtggagctaggcataacttttatgcagactacctgtatgaggcagatgtggatggtgttgtgttttcccttgtcgagctagcaaaaaagggaatggttgaagataattacaacaccaaacagaaggatctcaagaacttcaaagaaaatcttgtttccttttgggataccttggtccatgagtgtcagaatggccctttatttgatggtagcttattccaaaaaatcaaagactatgtggttgctttgtcatgtactcctccaagggtttatcgccaagtagcttcattggttgggctccagcttgtgacgtccttaatatctgttgctaagactctcagtggacagcgtgagaccactcaaagacagttgaatgcagagaagaagaagcagactgatggaccgattgttgaatctctaaacaaaaagctagctcatactcacaaaagcattacttacttggaggaactaatgcggaaaatattcagtgggttattcatgcaccgctatcgtgatgttgaccctgagatccggatgtcgtgcataaaatcacttggtatttgggttgtctcgtacccatcacttttcttacaagatatatacctgaagtatctaggatggacacttaatgacaagaatgctggggttagaagaacttctattcttgccttgcaaagcctgtatgaagtggatgaaaacataccttctcttggtctctttactgagagattttacagcaggatgatccagcttgcagatgatgttgatatttcagtagctgtgtcagctatcggactcatcaagcagttactgaggcatcaacttttgagcgatgatgatttaggtccactatatgatttgcttattgatgagcctccgctgatcaggcgtgcaattggggaattggtttatgatcatctgatagcacaaaacatcaaaacctcccagtctggagcaagagatggaaacaatgattcatcagaggttcatattggtcgaatgctgcaaatcctgagggaattttcagatgacccagtcctgagctcttatgtcattgatgatatttgggatgacatgaaggctatgaaagattggaagtgtataatctccatgcttctggatgaaaatccattaaccgagcttactgacatggatggaaccaatctagttcggatgctgcgagcctctgcaaagaaggctgttggggaaaggatagttcctgcaacagacaatagaaagatgtactacaataaaggccagaaggaaatattggaaaacagcaagcatgaaataactactgctttgctgaagaaatatccacagcttttaagaaaatacatatctgacaaagctaagatatcacctctaattgatatgatgatgcttatgaaacttgagctgtactcactaaaaaggcaagatcagcatttcaaggctgccatagatctcattgcggatgccttctttaaacatggtgacaaggagaccttgaggtcttgcatcaaggcaattactttctgttgcactaactgtcaggcagatcttcaaaattatgctgaaaacaaactgaaggatcttgaagacgagttggttttgaaagtcaaaactgcaatcaaggaagtagaggcaggtgatgatgaatactccctcatggttaatttgaagcgattttatgagcttcagttgtcaaaacctgtcaaaaatgatggtttatttgaggacatgtacagaatcctgagtcatctaaaagatatggataatgaggtgaagagctttctcctccttaacatgtaccttcaattagcatggtgcctgaatgctattgatggtgaaaacccatctgaagcttccattgacgaacttttatccaggcaaagctctctttttgaaaaactctattattacttggtggttctgcctacttatcagaaagagggaaggagcaccactatactttcctgcagagtctgtgtcattactgctgagatgtggtgcctgtttaagaagccaaaatattcttcaacaaggctcgagagtttgggatatctcccgcaactagatgttgtccagaatttctggaaactatgtgaacaacagctcaacataccagatgaaatagaagatgaagatgcaaatgaagaatatattgaagacacaaacaaggatgttgtcatgattgcagctgcaaagctagtgctagctgatacagtttcaaaggattacctgggcccagagcttgtttctcactatgcatcccatggaacaagtactacagagataatcaaacatctaatcacctcgcttcggaaaaatgctgacaacaacatgggtgccttatttttcgaggcactgaaaaggggatatgagcggtatatggcccatgtaagtgatggggaaaatcaaaccctcattggcaagtcttattcagaatgccaagatcttgctggtcggctcgcggggtcctatgttggtgcctcgcgcaataaaaacaagtctgagatcttgaagataatccaagacggtgtttcttttgcatttgtggaccttccaaagcaattgtctttcctcgaggctgctctactgccatttgtttctaaacttccatcgtcagatataccagacatcctgatagatgtacagaagaggactcaagatactaatactaatgaagatccaagtgcttggcgcccgtactttacgtttgtagagcatctacgcgataagcatgcaaagaatgaggttttgcaggaggaaaaggaggaaaaacctgtaaagcgcaggggtcggccaaggaaggttagagatgtacctgcaaggaatctttttgatggacacaagtctagcgatgaagagtctgttagtgactctgatcagcaagggcatggtgaagacaatgacgacgatgacgcagatcagcctctgatcaacacgtttaggtcttccgcatccaagctaagatcactgaaggtttctcagcaaggaacaagcggtcagaaaggaccttcgagggcatcaggaagcaatagctga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MDETLASLRRPKRGRPPRPREDHLAAEDFEEEGEDEEAEAEALA                    RPQTKRKRAASAAAAAALEDQTLIDIIKHNGRLISHAVKKLVEDYESDPKSVMFQILA                    MLFEACGARHNFYADYLYEADVDGVVFSLVELAKKGMVEDNYNTKQKDLKNFKENLVS                    FWDTLVHECQNGPLFDGSLFQKIKDYVVALSCTPPRVYRQVASLVGLQLVTSLISVAK                    TLSGQRETTQRQLNAEKKKQTDGPIVESLNKKLAHTHKSITYLEELMRKIFSGLFMHR                    YRDVDPEIRMSCIKSLGIWVVSYPSLFLQDIYLKYLGWTLNDKNAGVRRTSILALQSL                    YEVDENIPSLGLFTERFYSRMIQLADDVDISVAVSAIGLIKQLLRHQLLSDDDLGPLY                    DLLIDEPPLIRRAIGELVYDHLIAQNIKTSQSGARDGNNDSSEVHIGRMLQILREFSD                    DPVLSSYVIDDIWDDMKAMKDWKCIISMLLDENPLTELTDMDGTNLVRMLRASAKKAV                    GERIVPATDNRKMYYNKGQKEILENSKHEITTALLKKYPQLLRKYISDKAKISPLIDM                    MMLMKLELYSLKRQDQHFKAAIDLIADAFFKHGDKETLRSCIKAITFCCTNCQADLQN                    YAENKLKDLEDELVLKVKTAIKEVEAGDDEYSLMVNLKRFYELQLSKPVKNDGLFEDM                    YRILSHLKDMDNEVKSFLLLNMYLQLAWCLNAIDGENPSEASIDELLSRQSSLFEKLY                    YYLVVLPTYQKEGRSTTILSCRVCVITAEMWCLFKKPKYSSTRLESLGYLPQLDVVQN                    FWKLCEQQLNIPDEIEDEDANEEYIEDTNKDVVMIAAAKLVLADTVSKDYLGPELVSH                    YASHGTSTTEIIKHLITSLRKNADNNMGALFFEALKRGYERYMAHVSDGENQTLIGKS                    YSECQDLAGRLAGSYVGASRNKNKSEILKIIQDGVSFAFVDLPKQLSFLEAALLPFVS                    KLPSSDIPDILIDVQKRTQDTNTNEDPSAWRPYFTFVEHLRDKHAKNEVLQEEKEEKP                    VKRRGRPRKVRDVPARNLFDGHKSSDEESVSDSDQQGHGEDNDDDDADQPLINTFRSS                    ASKLRSLKVSQQGTSGQKGPSRASGSNS</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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DNA = <dnaseqindica>45..77#166..337#1590..1702#1778..1870#2035..2198#2282..2518#2693..2837#2936..3114#3951..4096#4193..4320#4395..4568#5173..5334#5414..5614#5687..5824#5928..6128#6258..6402#6529..6635#6784..6924#7228..7493#7575..7699#7797..8063#8204..8217#agggtttccccctcctccgctctcacactgcctcgcctccccggatggacgagaccctagcctccctgcgccgcccggtaaccctagcccctccgccgagctctcacccccctcgaccgctggattcgccatttttttctgattttttttttggatgaattgcagaagcgcgggcggccgccgcggccgcgggaggaccacttggccgccgaggacttcgaggaggagggggaggatgaggaggccgaggcggaggcgctcgcgcggccccagacgaagcgcaagcgcgcggccagcgccgcggccgcggccgcgctggaggaccaaaccctcatcggttcgccttctacccgttcttcccattctcctttgcgcgttggtcgccgtggtctcgctggagtgtgggggttggttgtgcttggggatgcactgcttagtgtgtagctgctgagttgacgagagtgagagctagttcgcagtgacgcgggataaattagtctatgtggctctctgggtggtgaattggtgattcctaaggttgaactgaggttgggctagtttagttcatcaagcagtgtgattttctgcttttgtagttggtctagagaattttgttaggattgtttcttttttcaatcaggaaattctaggttagctgaacaaaagaccattgatttcgattggactgttagttaccttggtactccctctgtcccagtttagagggcgcgcgtaaatttttttgacggtttaccagtttagagggcgtggttcgtttttcactgcttttcttcctggagtaccctccgcatgcatgcacatgacgcttggatatgcccgctcaataactgatcaagcgacgcaaccggccggcgcgtggagctgcacatgtgtgggaccacaaggttacatgcatgcagctgttactaatctgcatgtgtttggatcaaacccattttattaggggcagtttaggaaaaaataactctgcatgtgagctggtctcggtgaatttatttgtgcgccctctaaattgggacggagggagtactatcacctgttactggttcagtaccctatcaattcattggtagtgccaaaacctagccaaattttggctctaccaattatttggtagggtagagttcagattatatatgtttgattagctaccaatttgtttgatatagtgaagaaagttctagagtgttgccaaattaaatatgggcattaccgctttggctctaatccaaacaaatcacactactatttaagctgccaaatatttggtaaggcacattttggcatcaatccaaaatgacccatagtatcacaagccgatcttgaaactgcatggagagtcatgatttataaagatatgtgctgacctcagctggggttgccctaaccatagtcctgccagtactgtagtgcctgcccagaatgatgccagaggcttgtagattatgcatcgagatttaaaagatcctatcataacatgctgctcaaaatctatgacttagacacttactcggcaagttattttatcttcaatttgtgtcttattcctaaaaacttggaacttgcagatattattaaacataatggcaggcttatcagccatgctgtcaaaaaattggtcgaggattatgaatcagatccaaaatctgtgatgtttcagatattagcgatgctatttgaggtaatagatgttaacttcttaatgcagtttcttttggttgcttatttcataaaccagtgaatcttataatgacaggcttgtggagctaggcataacttttatgcagactacctgtatgaggcagatgtggatggtgttgtgttttcccttgtcgagctagcaaaaaaggtatcctgctgcgattttccctagaagagtgaatggagaataattttttgcagccttgtgattatccaatgtgcatgctatgtttatcctacatgttactaatcttgaaatgatatgcaatgctctcttttggatgatttcttttaaccttaacttgaaaatagggaatggttgaagataattacaacaccaaacagaaggatctcaagaacttcaaagaaaatcttgtttccttttgggataccttggtccatgagtgtcagaatggccctttatttgatggtagcttattccaaaaaatcaaagactatgtggttgctttgtcatggtaatttatctaagctataccttttattttctttgtgttagacacttggatgcatgtatctaatgtgctgtggtgtatttcagtactcctccaagggtttatcgccaagtagcttcattggttgggctccagcttgtgacgtccttaatatctgttgctaagactctcagtggacagcgtgagaccactcaaagacagttgaatgcagagaagaagaagcagactgatggaccgattgttgaatctctaaacaaaaagctagctcatactcacaaaagcattacttacttggaggaactaatgcggaaaatattcagtgggtgaggacctgaacttgcattttaatgtacactgtttactttcatatttctcaaatttgccattctgatgtggttcacttactggtatctggacaaaaatatttgcatgtggctgttttctgtacatatctcagtctactatgtccacttaatatattattttaccacttgcaggttattcatgcaccgctatcgtgatgttgaccctgagatccggatgtcgtgcataaaatcacttggtatttgggttgtctcgtacccatcacttttcttacaagatatatacctgaagtatctaggatggacacttaatgacaaggtacatattttagttctatgatttttggttgaaccttgtctgaccaatgagatgtgcaagttttgttatgtcattttgtgcaatctttgtttttgtagaatgctggggttagaagaacttctattcttgccttgcaaagcctgtatgaagtggatgaaaacataccttctcttggtctctttactgagagattttacagcaggatgatccagcttgcagatgatgttgatatttcagtagctgtgtcagctatcggactcatcaagcagttactgaggtgagttttgggcaaaatcttttgcctgtgaagagatcatttggtcactgctgggcaaccttacttttttttaccagagctttcctaagatatggtagtgagtttggggtgtataactttcgattgtacagtttgctattagggtttttgtagattggccatgccgctatgttttgagaactaaattttcaagcaataaattgtattttttagcattttccagcataatggaatcatggattttagccaggaaccggtgaattagcttcctttcatcaaataccatagagaaataggggatagttcatcactagtgttatcattagctttaggatgcaatagcgcagttcaataaatattctcagtattcacaattcaaaaatatttttgacctgcaccattgtagaaatacattcaacatgcatttacacaagcttttgatttggaaccaccataaatactcgcttgttgaatgaaaattggtccaaagaaatttgcagaaacacaggcttaaatgtgcactcttaattcacaataaaatacataagagttgcatattcaaaacaatgtgctatggacgaatggatcagtacgagtggtatatggtatttgacttggcattaatctactcatgtggtaattgattgacttgttgggcaccatgtgtgccttgtctatcctgaactttacctagcaatcacccttgttattatttactaatatcagtatttgtcttaccaaagtgtgctaggggaccatgcatttttttcagctttaattttttacatgcattactgcagcaaaacaaataacttttctgtttattccttttgcaggcatcaacttttgagcgatgatgatttaggtccactatatgatttgcttattgatgagcctccgctgatcaggcgtgcaattggggaattggtttatgatcatctgatagcacaaaacatcaaaacctcccagtctggagcaagaggtacttgtctctggaatgtttctgcttttatgccaccttatcttgctatcaaataactttcttagttcatctactgattgtactatctaattccagatggaaacaatgattcatcagaggttcatattggtcgaatgctgcaaatcctgagggaattttcagatgacccagtcctgagctcttatgtcattgatgatatttgggatgacatgaaggctatgaaagtatactcagttttgtttcaacttatattatcagtatgacttaaccgctataactgcaatgtcctattctgtaggattggaagtgtataatctccatgcttctggatgaaaatccattaaccgagcttactgacatggatggaaccaatctagttcggatgctgcgagcctctgcaaagaaggctgttggggaaaggatagttcctgcaacagacaatagaaagatgtactacaataaaggccagaaggtgtcaatgtcatttctgtcgtatcatatgttgctgctgcaagttgattgtttatttcttgatcgtatcatttgttgtattgcttgtttagtgttgctgccttagtggttatttaggacttgtaagtactatgcgtagaatgtaggtttattttgttggatattggcaatgtcctacacctttgaaagttagtctgacaagttaatctcttaaaagacctgtttgctagatacatccatttttaaatattacactgttagactttatttggtcaaacttttgaaacattgaccatcaatatctctcaaaatattttgtttgggaacataaaaatcatattggtagtttttttctttaattgtacttttacaatattaatttttttagatattattgttatattctaatagaaaatagtggtcaaagttgcacacccaagaccaaagaaaatcaacagtgtcatctatttaaatacggaggtagtaattgctagtcatgtagattgtagttctgaatctgttgcctgcttgttgaatctggtttgtttgtcgtaccattgttcatgtatttgttgaattgttactgaagcattattattctgcaggaaatattggaaaacagcaagcatgaaataactactgctttgctgaagaaatatccacagcttttaagaaaatacatatctgacaaagctaagatatcacctctaattgatatgatgatgcttatgaaacttgagctgtactcactaaaaaggcaagatcaggtcagttgaatagctatttattcttctgcacaaactttctgcttgacttgttgacagtttcgtgtacattttggttcagcatttcaaggctgccatagatctcattgcggatgccttctttaaacatggtgacaaggagaccttgaggtcttgcatcaaggcaattactttctgttgcactaactgtcaggcagatcttcaaaattatgctgaaaacaaactgaaggatcttgaagacgagttggttttgaaagtcaaaactgcaatcaaggaagtagaggtatgcatgtcttattcacagtctctttgttttaaagccatgaaggtaaatatgttacaatctacattgcaggcaggtgatgatgaatactccctcatggttaatttgaagcgattttatgagcttcagttgtcaaaacctgtcaaaaatgatggtttatttgaggacatgtacagaatcctgagtcatctaaaagatatggataatgaggtatgaactattaccttgattagctattactactccagtctccctttgcagagttcactgtcggtactgtattagctaatatgttcatgttttaaataattaggtgaagagctttctcctccttaacatgtaccttcaattagcatggtgcctgaatgctattgatggtgaaaacccatctgaagcttccattgacgaacttttatccaggcaaagctctctttttgaaaaactctattattacttggtggttctgcctacttatcagaaagagggaaggagcaccactatactttcctgcagagtaagtcttctgagttaaacattgaagaaaagaacacatttttttgtattatgttgtatgctgatctgcaggctgtatgtcttggctatgtttagcccactgacttgatattgccttgtttttttgtaggtctgtgtcattactgctgagatgtggtgcctgtttaagaagccaaaatattcttcaacaaggctcgagagtttgggatatctcccgcaactagatgttgtccagaatttctggaaactatgtgaacaacagctcaacataccaggttttgatgttacacagattctatacttcattcgttgtatagcttataaaaataaatttctaaataaaacctcatcatcatgttggtgctactcttttaattgaagttgatcatgttcatcaacagatgaaatagaagatgaagatgcaaatgaagaatatattgaagacacaaacaaggatgttgtcatgattgcagctgcaaagctagtgctagctgatacagtttcaaaggtctctgctacgttttctaactgtaatgaactgttaggtcctcaagcaatgttttcctactacatcttctgttgtaccataatttggtcaccttggcagcttcctattgtcagacaaactaagttttcaattttatttctgtgtgcaggattacctgggcccagagcttgtttctcactatgcatcccatggaacaagtactacagagataatcaaacatctaatcacctcgcttcggaaaaatgctgacaacaacatgggtgccttatttttcgaggcactgaaaagggtaggtattttgtcccaccttcaaatgcacacaattattatttattatagtaactattgagtaattatattatgttactgattgtcgattaggaatttacttgttccagcttttacaatgtttaacaaactttaaaggaacttctgactttgtcaaccatatcttgtattttggaagtattttgactaaagacacttatactaaactcacttttgtattagaaacttttgctttatctgcttttaactgattttatgtgtgtgactttcttttgtaaacttttctttattttcatctaactagggatatgagcggtatatggcccatgtaagtgatggggaaaatcaaaccctcattggcaagtcttattcagaatgccaagatcttgctggtcggctcgcggggtcctatgttggtgcctcgcgcaataaaaacaagtctgagatcttgaagataatccaagacggtgtttcttttgcatttgtggaccttccaaagcaattgtctttcctcgaggctgctctactgccatttgtttctaaacttccatcgtcagatataccagacatgtatggcatttactcttgtcatttatgatgcttccatttattttatttatgcacaattttcatttatttcattgtatgtagcctgatagatgtacagaagaggactcaagatactaatactaatgaagatccaagtgcttggcgcccgtactttacgtttgtagagcatctacgcgataagcatgcaaagaatgaggttttgcagggtatgttgaactcttcctgaattttcccttttttatgttacataactgcaaatctttcttattgaaagtatggccgattctattgtttcctatccagaggaaaaggaggaaaaacctgtaaagcgcaggggtcggccaaggaaggttagagatgtacctgcaaggaatctttttgatggacacaagtctagcgatgaagagtctgttagtgactctgatcagcaagggcatggtgaagacaatgacgacgatgacgcagatcagcctctgatcaacacgtttaggtcttccgcatccaagctaagatcactgaaggtttctcagcaaggaacaagcggtcagaaaggaccttcgagggcatcaggtaaatggtcaaggattttgctctttccacatcagtcggatgcactgacgaatctacagcagcaaccatggtttctttctctgtttccattctatttttgtgtggtgttcccattttctaattacagtgtgtattttcaggaagcaatagctgagggcacgcactgacgtcgttacgcatgactgaacttggcacaaatgaatgcagcagatttgtggcgttgtagatgatttgtacctaggtgctcacccttttggtaaacaacgtgacatagacatttgttaggtttttaccccttcgccatgtatattatgttcagtaataatatatgtagaaaatcgcatgttgcattgtaccaatttgatcgatgtatttctcctgggttccgagactaaagaacacttgcatgcgagagatagggagagcagcaaccattttttatttattcaatggagaatccgaaccttggattggtttgcatgggaaccaatgagcccggcaatccttgcatacc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061376.1 RefSeq:Os05g0188500]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 08:21, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information