|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0621500|
| |
| − | Description = Disease resistance protein family protein|
| |
| − | Version = NM_001187167.1 GI:297723464 GeneID:9269204|
| |
| − | Length = 5991 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0621500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:31976423..31982413|
| |
| − | CDS = 31976423..31976732,31976854..31978677,31978717..31979461,31979666..31981454,31981755..31981782<br>,31981962..31982413|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:31976423..31982413
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:31976423..31982413
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgggggtggagtggagcgtggtggacgcggcgatagggtggctggtgcagagcgtcctggggaccctcctcgccggcaagctggaggcctggacgcgcgaggtcgggctcgccggcgacgtgcggaggctcgaggtcgggatgaggagcgtcgagatggtgctcgccgcggcggccgcccgggggagggagctcgtcgggaacgagccgctgtcccgctccctcgacgacctgaggcagctgctgttcgacgccgaggacgtcgtcgacgagctcgactactaccgcctccagctagagatcgagcagcgcgaggacgctgctgctgctgtggattcttgtgttgagggaggcaatgcatcttccttcagctccacctcgtcttctacttgccgtcttgtatggaatgctgccactaagcttacttcttgggcatcaatggcagtagatttcgtcatggcccatgccggaagcaaaaggaaaaggggacaatatgagctagcacaagatgatgccactgttgtggttgtgccgttcgaaaacaaggatgatatctctcgcaggataaacgagatagcaacctcgctgtgcacaattagtgattctgtgcacaaggctatccatttagaggcctcttactgcattgcggtaccaaaagaaggcgtggtcagcaacagacgactgacaacttcggtgccagttgaacagaaggtgtatgggagggatagtgacagagacatgatagtggagcttctggtaaatgggaaatccagggacctgaatgttctgccaatagttggaaatggaggggtcggaaagaccactcttgctaaatttgtataccgtgatcgaagaatcaaagatcattttgatttgcaaatgtgggtttgcgtatcttccatcttcgatgaggtgagactaacacgcgagatgctagagcatgcctgtagagacaggcaggattgtgagaaaataagcagctttaatgtgcttcaggagatgctcatgggcagcgttagaaacagaagatttctgctcatcttagatgatgtgtgggaagacaaggataaaaacggttggaatagactactaggtccattgcgccagaatcaaacagtcggatgcatgattctagcaacaactcggagcccctctgttgccaaaaagatcagaacactgacctcagttgaattgaaaggtttggatgacgacaacttttggttgttcttcaagcaatgcgcatttggtgatgagaaccacggggatcatcctagtttgcaagtcattggacaacaaattgtgaaaacactgaagggttacccactagctgcccaaagtgttggtgcacttttgggacagaatcttaactatgagcactggtggaaaatccgggaccaatgggcatctctacagaaaggtgatgatgatattttacctatcttaaagcttagttatgattatctaccatcttgcttgcaacgctgtttctcttactgctcattgtttccacaagagcataaatttgatggggaaaagttgatttttgcatggatttcacaaagctttgtgtcttgcaaagatacaaaaaatagagtggagcaaacagggagggagtacctggacaaattggtggatttgggcttcttccagaaagatggcccgcactatgtcatgcatggtttaatgcatgaactagcacaggcagtttcatctaatgactgtgccactattgatggtttgaagtccaattcgattccttcaactattcgtcatctttcaatcattacctctgcttatgatgaagttgagcatgacagttttcccacagataagtttgagagacaattggagaaaattacatgtttaaaaaaactgaggaccttgatgttctttggtcatggaccctacgggagcagaaatttgttgaaatgtttactaacattatgcaaacatgcaaaaggtctgcgttacctaagagtacactttgcatttatgttaattgatgctctctggaactccataaagcctttccatctccgatatattgaattttttaatggaagtatcactttcgaaaaatcttgttggtgggaaacagaagatggacctcgtatctacaacgtcgatcctcaaggttcttccagcaatcttgtacctaggcgcataaataatctggtcaacctacggcatcttattgctgataaggaaaggcactcggaaattgctaatgttgggaggttaacgtctcttcaggaactaagaaaatttagagttgaaaatgttgatggttttgaaatcggacaacttcagcaaatgaatgagctcgtaagtcttggaatttttcaacttgggaatgtcaagactaaagaagaggccaggagagcaagactgatagacaaggactacctagaaaatttgtgcttggtatgggatgatagtaccacaaatttgaaacctgctatggcaacagcagaggaggtcttagaaggtcttcatccaaatagaaatgtaaagcgtatcaaaatccggggctacaatggtgctatctgccccatgtggcttgggagtaatgtttctgtccctttacttcgatcccttcacttaaagaattgtagtgaatggagagcaattcaacttgaagagatttcttcacttggcaagctgaatttgatccggatgtggagtttagtggatgtctcaattccttctttggatgaattagtgctaattgatttgccaaacttggaaaaatgtattggtacatataatagggaattgacttctaacatgagaattctgaggatggagagatgtgacaagctgaaggactttactcttttcctgaactatgatcatttcagagttgagcggaagacatggcaatggactatccttccatttgaagagatgcattctcttaaggacttaaagttgattgcgatgcctggtgttagagaagtttcagttccttacctgaagaagttggtcataagaaacatgccaaacctagaatgttgcacatgtgcgaacctcgacctattatcttcctgtctagaagtactgaaaattacaaaatgcagaaaattgaccagttttcaagtcttgcaagttttaccaccccactgtgaggagaagacatggcttccaaacatgaataaactcaaagtgcacagttgtcctcattttatagtatcatgcccttttccaccttctgcagaattgtccaaggtatctgtatccatccgaggagttttggctcctcctgcaatagaaatgcgtaagcattggccactctttacaatcaagtcttatgagtggagtgtcttgaatgatgataccgtggcattcaacaacttgacaagtatactaaacttccgcatcataaattgccccaatctggtctctgtttcgtttgaagcgttaagtcagctcatgtctttacagagcttggaaatcgttgactgccccaggttgctttggccacagatgatgctggaagaagcatgtgaaggaaagacaaagtttccatctatcacacatctatcaattgtgtcatctagtatgctgggtgatccattattgcttccatgtacacagtctgaacagctgactgtaaatgacaaaccttcaacattcagttgtcctgtagaagagcaaagcaaccatctgtctttactatatatctcctcaactactactacagcaacaacagagtcgataagaaacggacccatactatttcatatgccacatcttctctacacatatgtcaaaaagttgcacatatctgactgcccaaatttggttttttgcagcagaaaggttggttttgcgggattcacctcccttgaggagttgacagttaccagatgccccaaattactcatgcccatggtgcatgaaggtgttagtgatgatcatataggtgggaggtttctccttccaccattactcaaccaatttgagaccgatcatctctcagaaaagctccagctctattttccagagaaccatacctctctcagaagattgtcagtgtgggacagccctagcctgatatgcctacagctgcattcttgtacaaagttggaggagttggaaatctttaactgtaagaacttgtgtacacttgggggattgacatttctcagctccctaaagatcatgaagcttgcaaggaatcccaagctgtccacttcatgggaatttgactcacaggatcaacaatgcacgggagatcaggctggagatctaagcattttatctggactggaatggcttgagactgatgacttctctgtccttaccatgtccttcttcaaacacctcaactccctccaacacttgacgctttcaagctcgcgaagttattggagagtggtgagactgtcagaggggcaagggagagtgcttcagcagctcacccacctccaggagctcagattcctctgctgcgatgatctcctcgtgctgcctgaacagttgcattgcctgtcctccctcaagaagttggagattggctactgtccgggtatcttacgtttgccggaagagggactccctcttttatcacttgaagaattggaaaccagaggctgcactgaggaactaaataggcagtgcagactagcagcgacagaaaagctaaaggtcctaattgatgggaaaccgcggctgtctgtcattgcttgtgcaatcgcactcaaccgctgctggacggcggacaggttaagcatcaggggcttgcttcaccccagcatgtgtgtcttatgcgatcagcacgaagaaagcatcgatcacattttggtcgcatgcccagaatcaaggcagctctggtggctactgctctcggccatcagtcgcccggaatgcttgcccgtcaatgaaatctcattccattcctggttgtgtgacaagagggaaaccttcccaagctctcaacggcgaggtttcgataccattgctacactcgcagcatggacaatttggaaggaatggaataacagggtgttcaatcagaagcagagaagctggacagaagtggcaagggcaatggcagaagaggcagcgctgtggcggctcaccaatactgccatgccggccatgcctttaggccgcttaggtcgcaacattgtgtcgcgagaatag</cdnaseq>|
| |
| − | AA = <aaseq>MGVEWSVVDAAIGWLVQSVLGTLLAGKLEAWTREVGLAGDVRRL EVGMRSVEMVLAAAAARGRELVGNEPLSRSLDDLRQLLFDAEDVVDELDYYRLQLEIE QREDAAAAVDSCVEGGNASSFSSTSSSTCRLVWNAATKLTSWASMAVDFVMAHAGSKR KRGQYELAQDDATVVVVPFENKDDISRRINEIATSLCTISDSVHKAIHLEASYCIAVP KEGVVSNRRLTTSVPVEQKVYGRDSDRDMIVELLVNGKSRDLNVLPIVGNGGVGKTTL AKFVYRDRRIKDHFDLQMWVCVSSIFDEVRLTREMLEHACRDRQDCEKISSFNVLQEM LMGSVRNRRFLLILDDVWEDKDKNGWNRLLGPLRQNQTVGCMILATTRSPSVAKKIRT LTSVELKGLDDDNFWLFFKQCAFGDENHGDHPSLQVIGQQIVKTLKGYPLAAQSVGAL LGQNLNYEHWWKIRDQWASLQKGDDDILPILKLSYDYLPSCLQRCFSYCSLFPQEHKF DGEKLIFAWISQSFVSCKDTKNRVEQTGREYLDKLVDLGFFQKDGPHYVMHGLMHELA QAVSSNDCATIDGLKSNSIPSTIRHLSIITSAYDEVEHDSFPTDKFERQLEKITCLKK LRTLMFFGHGPYGSRNLLKCLLTLCKHAKGLRYLRVHFAFMLIDALWNSIKPFHLRYI EFFNGSITFEKSCWWETEDGPRIYNVDPQGSSSNLVPRRINNLVNLRHLIADKERHSE IANVGRLTSLQELRKFRVENVDGFEIGQLQQMNELVSLGIFQLGNVKTKEEARRARLI DKDYLENLCLVWDDSTTNLKPAMATAEEVLEGLHPNRNVKRIKIRGYNGAICPMWLGS NVSVPLLRSLHLKNCSEWRAIQLEEISSLGKLNLIRMWSLVDVSIPSLDELVLIDLPN LEKCIGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHS LKDLKLIAMPGVREVSVPYLKKLVIRNMPNLECCTCANLDLLSSCLEVLKITKCRKLT SFQVLQVLPPHCEEKTWLPNMNKLKVHSCPHFIVSCPFPPSAELSKVSVSIRGVLAPP AIEMRKHWPLFTIKSYEWSVLNDDTVAFNNLTSILNFRIINCPNLVSVSFEALSQLMS LQSLEIVDCPRLLWPQMMLEEACEGKTKFPSITHLSIVSSSMLGDPLLLPCTQSEQLT VNDKPSTFSCPVEEQSNHLSLLYISSTTTTATTESIRNGPILFHMPHLLYTYVKKLHI SDCPNLVFCSRKVGFAGFTSLEELTVTRCPKLLMPMVHEGVSDDHIGGRFLLPPLLNQ FETDHLSEKLQLYFPENHTSLRRLSVWDSPSLICLQLHSCTKLEELEIFNCKNLCTLG GLTFLSSLKIMKLARNPKLSTSWEFDSQDQQCTGDQAGDLSILSGLEWLETDDFSVLT MSFFKHLNSLQHLTLSSSRSYWRVVRLSEGQGRVLQQLTHLQELRFLCCDDLLVLPEQ LHCLSSLKKLEIGYCPGILRLPEEGLPLLSLEELETRGCTEELNRQCRLAATEKLKVL IDGKPRLSVIACAIALNRCWTADRLSIRGLLHPSMCVLCDQHEESIDHILVACPESRQ LWWLLLSAISRPECLPVNEISFHSWLCDKRETFPSSQRRGFDTIATLAAWTIWKEWNN RVFNQKQRSWTEVARAMAEEAALWRLTNTAMPAMPLGRLGRNIVSRE</aaseq>|
| |
| − | DNA = <dnaseqindica>1..310#432..2255#2295..3039#3244..5032#5333..5360#5540..5991#atgggggtggagtggagcgtggtggacgcggcgatagggtggctggtgcagagcgtcctggggaccctcctcgccggcaagctggaggcctggacgcgcgaggtcgggctcgccggcgacgtgcggaggctcgaggtcgggatgaggagcgtcgagatggtgctcgccgcggcggccgcccgggggagggagctcgtcgggaacgagccgctgtcccgctccctcgacgacctgaggcagctgctgttcgacgccgaggacgtcgtcgacgagctcgactactaccgcctccagctagagatcgagcagcgtacgttctttcccccccaaatttccatcccaaaatcccaatttctgttccttcctgtttccttgcactgtttcactcacaaatttcactccccgtctgttggttttaatggtttctacaggcgaggacgctgctgctgctgtggattcttgtgttgagggaggcaatgcatcttccttcagctccacctcgtcttctacttgccgtcttgtatggaatgctgccactaagcttacttcttgggcatcaatggcagtagatttcgtcatggcccatgccggaagcaaaaggaaaaggggacaatatgagctagcacaagatgatgccactgttgtggttgtgccgttcgaaaacaaggatgatatctctcgcaggataaacgagatagcaacctcgctgtgcacaattagtgattctgtgcacaaggctatccatttagaggcctcttactgcattgcggtaccaaaagaaggcgtggtcagcaacagacgactgacaacttcggtgccagttgaacagaaggtgtatgggagggatagtgacagagacatgatagtggagcttctggtaaatgggaaatccagggacctgaatgttctgccaatagttggaaatggaggggtcggaaagaccactcttgctaaatttgtataccgtgatcgaagaatcaaagatcattttgatttgcaaatgtgggtttgcgtatcttccatcttcgatgaggtgagactaacacgcgagatgctagagcatgcctgtagagacaggcaggattgtgagaaaataagcagctttaatgtgcttcaggagatgctcatgggcagcgttagaaacagaagatttctgctcatcttagatgatgtgtgggaagacaaggataaaaacggttggaatagactactaggtccattgcgccagaatcaaacagtcggatgcatgattctagcaacaactcggagcccctctgttgccaaaaagatcagaacactgacctcagttgaattgaaaggtttggatgacgacaacttttggttgttcttcaagcaatgcgcatttggtgatgagaaccacggggatcatcctagtttgcaagtcattggacaacaaattgtgaaaacactgaagggttacccactagctgcccaaagtgttggtgcacttttgggacagaatcttaactatgagcactggtggaaaatccgggaccaatgggcatctctacagaaaggtgatgatgatattttacctatcttaaagcttagttatgattatctaccatcttgcttgcaacgctgtttctcttactgctcattgtttccacaagagcataaatttgatggggaaaagttgatttttgcatggatttcacaaagctttgtgtcttgcaaagatacaaaaaatagagtggagcaaacagggagggagtacctggacaaattggtggatttgggcttcttccagaaagatggcccgcactatgtcatgcatggtttaatgcatgaactagcacaggcagtttcatctaatgactgtgccactattgatggtttgaagtccaattcgattccttcaactattcgtcatctttcaatcattacctctgcttatgatgaagttgagcatgacagttttcccacagataagtttgagagacaattggagaaaattacatgtttaaaaaaactgaggaccttgatgttctttggtcatggaccctacgggagcagaaatttgttgaaatgtttactaacattatgcaaacatgcaaaaggtctgcgttacctaagagtacactttgcatttatgttaattgatgctctctggaactccataaagcctttccatctccgatatattgaattttttaatggaagtatcactttcgaaaaatcttgttggtgggaaacagaagatggacctcgtatctacaacgtcgatcctcaaggtttgccgacatgttatcaccttcaagcattggatgcaggttcttccagcaatcttgtacctaggcgcataaataatctggtcaacctacggcatcttattgctgataaggaaaggcactcggaaattgctaatgttgggaggttaacgtctcttcaggaactaagaaaatttagagttgaaaatgttgatggttttgaaatcggacaacttcagcaaatgaatgagctcgtaagtcttggaatttttcaacttgggaatgtcaagactaaagaagaggccaggagagcaagactgatagacaaggactacctagaaaatttgtgcttggtatgggatgatagtaccacaaatttgaaacctgctatggcaacagcagaggaggtcttagaaggtcttcatccaaatagaaatgtaaagcgtatcaaaatccggggctacaatggtgctatctgccccatgtggcttgggagtaatgtttctgtccctttacttcgatcccttcacttaaagaattgtagtgaatggagagcaattcaacttgaagagatttcttcacttggcaagctgaatttgatccggatgtggagtttagtggatgtctcaattccttctttggatgaattagtgctaattgatttgccaaacttggaaaaatgtattggtacatataatagggaattgacttctaacatgagaattctgaggatggagagatgtgacaagctgaaggactttactcttttcctgaactatgatcatttcagagttgagcggaagacatggttcccattactgacaaaactcaccatcaagcaatgccctcagataatgttgttatttcttccttttgacacatgaattatccgatctcttttcggtttgcaaatgatagtgattttttacttaatcatttaatgaagaggtcatttttttagccatatctttctgaactgaaaaccttactgaattagattgttgaattgcaggcaatggactatccttccatttgaagagatgcattctcttaaggacttaaagttgattgcgatgcctggtgttagagaagtttcagttccttacctgaagaagttggtcataagaaacatgccaaacctagaatgttgcacatgtgcgaacctcgacctattatcttcctgtctagaagtactgaaaattacaaaatgcagaaaattgaccagttttcaagtcttgcaagttttaccaccccactgtgaggagaagacatggcttccaaacatgaataaactcaaagtgcacagttgtcctcattttatagtatcatgcccttttccaccttctgcagaattgtccaaggtatctgtatccatccgaggagttttggctcctcctgcaatagaaatgcgtaagcattggccactctttacaatcaagtcttatgagtggagtgtcttgaatgatgataccgtggcattcaacaacttgacaagtatactaaacttccgcatcataaattgccccaatctggtctctgtttcgtttgaagcgttaagtcagctcatgtctttacagagcttggaaatcgttgactgccccaggttgctttggccacagatgatgctggaagaagcatgtgaaggaaagacaaagtttccatctatcacacatctatcaattgtgtcatctagtatgctgggtgatccattattgcttccatgtacacagtctgaacagctgactgtaaatgacaaaccttcaacattcagttgtcctgtagaagagcaaagcaaccatctgtctttactatatatctcctcaactactactacagcaacaacagagtcgataagaaacggacccatactatttcatatgccacatcttctctacacatatgtcaaaaagttgcacatatctgactgcccaaatttggttttttgcagcagaaaggttggttttgcgggattcacctcccttgaggagttgacagttaccagatgccccaaattactcatgcccatggtgcatgaaggtgttagtgatgatcatataggtgggaggtttctccttccaccattactcaaccaatttgagaccgatcatctctcagaaaagctccagctctattttccagagaaccatacctctctcagaagattgtcagtgtgggacagccctagcctgatatgcctacagctgcattcttgtacaaagttggaggagttggaaatctttaactgtaagaacttgtgtacacttgggggattgacatttctcagctccctaaagatcatgaagcttgcaaggaatcccaagctgtccacttcatgggaatttgactcacaggatcaacaatgcacgggagatcaggctggagatctaagcattttatctggactggaatggcttgagactgatgacttctctgtccttaccatgtccttcttcaaacacctcaactccctccaacacttgacgctttcaagctcgcgaagttattggagagtggtgagactgtcagaggggcaagggagagtgcttcagcagctcacccacctccaggagctcagattcctctgctgcgatgatctcctcgtgctgcctgaacagttgcattgcctgtcctccctcaagaagttggagattggctactgtccgggtatcttacgtttgccggaagagggactccctcttttatcacttgaagaattggaaaccagaggctgcactgaggaactaaataggcagtgcagactagcagcgacagaaaagctaaaggtcctaattgatgggaaagtgtgtagggtctgatagaagcttgaagacctcgcctctctatttgttgtatgctccgcaaatgggctagtactgagctgcttatgaggtactagtataatctaaaatttacaatattccatagttaactgaaatattcagttttctcttgctaaagtaaaacttataagagtttttgtactgcactgcaggccaagatgttatttatgcagttgaggaccatcattcgcctaaaattccagcaaacattcttgtgatgagttgatgatagtagcttattgaatctaatatgattcctagccgcggctgtctgtcattgcttgtgcaagtaagttttgtggccgcagtttactgccttttgttctgaagtttctgcagcgcttcatactgggtacttttgaagactaatacacgcagtgtaatttggtgtgagtttgtgtctgcactctgcagtgtggatttgttgctgtttactattggtagtattctctggtttcatttggctagtcgcactcaaccgctgctggacggcggacaggttaagcatcaggggcttgcttcaccccagcatgtgtgtcttatgcgatcagcacgaagaaagcatcgatcacattttggtcgcatgcccagaatcaaggcagctctggtggctactgctctcggccatcagtcgcccggaatgcttgcccgtcaatgaaatctcattccattcctggttgtgtgacaagagggaaaccttcccaagctctcaacggcgaggtttcgataccattgctacactcgcagcatggacaatttggaaggaatggaataacagggtgttcaatcagaagcagagaagctggacagaagtggcaagggcaatggcagaagaggcagcgctgtggcggctcaccaatactgccatgccggccatgcctttaggccgcttaggtcgcaacattgtgtcgcgagaatag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001187167.1 RefSeq:Os04g0621500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
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Annotated Information
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Structured Information
