Difference between revisions of "Os04g0626000"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
−
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
−
GeneName = Os04g0626000|
 
−
Description = HMG-I and HMG-Y, DNA-binding domain containing protein|
 
−
Version = NM_001060478.1 GI:115460685 GeneID:4337066|
 
−
Length = 5210 bp|
 
−
Definition = Oryza sativa Japonica Group Os04g0626000, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
−
 
 
−
  ORGANISM  Oryza sativa Japonica Group
 
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
−
|
 
−
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
 
−
AP = Chromosome 4:32229784..32234993|
 
−
CDS = 32230175..32230209,32230306..32230353,32230798..32230881,32230955..32231014,32231208..32231261<br>,32231366..32232329|
 
−
GCID = <gbrowseImage1>
 
−
name=NC_008397:32229784..32234993
 
−
source=RiceChromosome04
 
−
preset=GeneLocation
 
−
</gbrowseImage1>|
 
−
GSID = <gbrowseImage2>
 
−
name=NC_008397:32229784..32234993
 
−
source=RiceChromosome04
 
−
preset=GeneLocation
 
−
</gbrowseImage2>|
 
−
CDNA = <cdnaseq>atgacatctgtagagaataaagctgttgcacataatgaaccactacccatggagcagacattaagctctggtgctaagcgtaagcgtggtcgtccacggaagtatgagtacggcatgcatgaattaccatatagtgtgcagcacattcagagcgtcccacctcttcacagcacacaagatagctcaaacatccgacaggatgggatacagatcaaccatacatcaggtggtagctttggccctaatataggcacaattcaggctttgcctacaaagcaaggcccagctaatagatccagtggacctagagattctgtcaatctggttaagacttctctcagccaagcctccatttatactagtgctcctttgcaaggtaattcagtcaaagatgatattgttggcaagtattttgttggtaagatgtcgaagaaatttcctgggttttctctgattacggtgaaagtgaaggacaatcaggttctcaaaggttggattccagatgaaaataacctccgcccaataacaccaaaagatgatcttgccccagatctccctatgcttcgaccaagtcaagttcgaaagaggccatctactgtttacagacaagcttctggtcctattccagtccccttggaggatgttacatttgcaaagcctctacagatgaggaggcctgtagagaaatccttcactaagcacacggtcccttccgttccaagacctcacatgggttctggggttgttgcagcagtacctatctcagtttcacccagtaatgctgaatcaaggattttctccgagcagggtactgaacatgtgaatccacaaccgttatctgctgtggtacctattaaatcaggtcaacctgtattggcatcatgcaaggaagtcgctggagggaaaactgtcaatgagattcaaacagtctctgaatcttcaaagcacactgaagagtcatcaggggaaaggcatctgcttaatgttccagtaatggatgctataaaggaatctttgggtcccaaagagcagcctaatgctacaaatagcaagcaacaaacttttatggaaccaccggaaagcacagaacaagctgtgcagctggacacagagagagacatttccaaaggagctgatgactcaaagtcagaagcctcaggaggaactgcacctccggtagaggcttcaaccgcagtacataatccccaagatgacagtcatgaaatgaaggttgacaacaaatga</cdnaseq>|
 
−
AA = <aaseq>MTSVENKAVAHNEPLPMEQTLSSGAKRKRGRPRKYEYGMHELPY                    SVQHIQSVPPLHSTQDSSNIRQDGIQINHTSGGSFGPNIGTIQALPTKQGPANRSSGP                    RDSVNLVKTSLSQASIYTSAPLQGNSVKDDIVGKYFVGKMSKKFPGFSLITVKVKDNQ                    VLKGWIPDENNLRPITPKDDLAPDLPMLRPSQVRKRPSTVYRQASGPIPVPLEDVTFA                    KPLQMRRPVEKSFTKHTVPSVPRPHMGSGVVAAVPISVSPSNAESRIFSEQGTEHVNP                    QPLSAVVPIKSGQPVLASCKEVAGGKTVNEIQTVSESSKHTEESSGERHLLNVPVMDA                    IKESLGPKEQPNATNSKQQTFMEPPESTEQAVQLDTERDISKGADDSKSEASGGTAPP                    VEASTAVHNPQDDSHEMKVDNK</aaseq>|
 
−
DNA = <dnaseqindica>4785..4819#4641..4688#4113..4196#3980..4039#3733..3786#2665..3628#tccctctcgcgttttcctccccatctctcctcctcctcctcctccgtgtctccgccggtggtgccccggcgagctctcctccgccgcctcggcgcgccacctctcctctcctcgcgccgcgggggagaagccgaacgggcgccggagacacggcgcggattgcctcaccccccttagtggccgtatcaactatcacccttggtgcgcggcctcctcgcgcgcgcgggaacggcgatcgtatcggggtcggatcggattggaggtatccatttttttctctcttgggcatctgcgtcatttcatgagacggcgttgattggatttgtgacccattcgggattagatggatttttttttttttgccctctgattagctcatccagtttttttcccggaatttaggagctcagttaatcgatgttatgtgttgatgtaatatggtaatcaatggtacaggaggaggggaaatcatttcatttggttattgctttcaacaaagctgtgcctcggcctttaattttacttaaaaaatgcattgctgcattttttttaggttttagtgtggtaggttgggtaggaattggataagattgctagtggtaatgaacttcacctccaactcatctttatacgattctttttgttgcttgagcccaggcttgcaattttggtgcaacatttagggattattacaagttccaacgaacaagtttggtgatattagttggtccctctagttcatctgtttgacacatattttacaaagcttgagtgtttgtgctcagggcatgtgttacagatctacaagagctcaacgccgtaataagttggtttctgcatttgtaatccaagaatataacccagtttaatttattacatgttgatgctagtaatagttgctatagaacatttatagccaggaaggtatttatgttccttttgcctcgtatgcatctgacaaatttcattttcattgcttcatggatatttactgttatttattatataaacattagatatgactagggcttcgtggaaattcctcctccaatgctcgtttttggcaattactgtttccaatggatttggtcactaggaatggtaaccgacgcacacaggattaaaatgtaggggttgccagtgaaataaaaaacacattagtaacgactgaattgaaaggaatcatttttttggatccaaatttatacatgagccgcatgtaaacaaaccactcttgctgaagacaattttttatcgtaattctgctatgcacagcgaagtcctgagatctgataaatgtgcttaaatatctatttgtgtactaatatcatcatacttaatggtgattttgaagtgctacttcataattttataaatgtaaatttggaaactgaacacaaattgccttcatttatcacagccacagcccacagcagaggcaccaccacctgagcagctgaactcaactaagcggcatgcacaccagagtcggcttgcactcacacgctacaaccctgccacttgtacgaatggaagaatggttggaccgcagcaggggatgctcgggcccccctgttgtgtctgccccttgaaacggttacggaaacggtaagagccattcgaaacggtggcagaaatggttttgctgttcaatcgaccattttcttggtttatcatattgttccagaaattatcattttggggaaatcggtaattagcatatacagctccaactagaggctgactatagcaacgcgtagaggcccatgatccacgccaagtagaggaccacttcaggccacatcaccgtgtagagagccactacgtcaatcaggacttgaccaagctaccctgcccacttctttcacaaaaatggttccagctaggggattcaaacagctgacctataagttagaaaagacatgcaccaaccaccatattaaatatttaaacttcattatgcacctcgtatacaactattttattagttcataaatgtttttagtacaattgtcaatggctatatgtaaacatgccatcatattaaataaattgagttatattacgtgtatatgtgtgttggtcaagtgtgtgaaaacatatgttgttactatttgatgtttccgacatgaattgttggtttcctaatgattccaacacatttccgcccggattattccctttttgatttttcaatatcatttccatttccatttccggctctactgctttcaattatattttcgagaaaagtacggttacagaaatggttgaagctgttttccgaccattttctcccctagatatgaccctgtgggtactttatttattgcaaactgtgctatgtctcttttgaaaataattccatgagagcttcctttttagttacgttcttagcagacttaattaatttcattcttagcggatatggaaagtaggcttctatcttcctgattgtcgacttgctctatcatcttctaatcttcttgtgattacttgccatattttgccatcctttcgctattgaggttgctcattgcgctcactttgcatgttcaaggggagaaaaactcatcaagtaattgaaggtggtgaatacacttttacggggcattatcatcgttcctaggttcagctgcaaaaagttaaagcaaattgccaaagatgacatctgtagagaataaagctgttgcacataatgaaccactacccatggagcagacattaagctctggtgctaagcgtaagcgtggtcgtccacggaagtatgagtacggcatgcatgaattaccatatagtgtgcagcacattcagagcgtcccacctcttcacagcacacaagatagctcaaacatccgacaggatgggatacagatcaaccatacatcaggtggtagctttggccctaatataggcacaattcaggctttgcctacaaagcaaggcccagctaatagatccagtggacctagagattctgtcaatctggttaagacttctctcagccaagcctccatttatactagtgctcctttgcaaggtaattcagtcaaagatgatattgttggcaagtattttgttggtaagatgtcgaagaaatttcctgggttttctctgattacggtgaaagtgaaggacaatcaggttctcaaaggttggattccagatgaaaataacctccgcccaataacaccaaaagatgatcttgccccagatctccctatgcttcgaccaagtcaagttcgaaagaggccatctactgtttacagacaagcttctggtcctattccagtccccttggaggatgttacatttgcaaagcctctacagatgaggaggcctgtagagaaatccttcactaagcacacggtcccttccgttccaagacctcacatgggttctggggttgttgcagcagtacctatctcagtttcacccagtaatgctgaatcaaggattttctccgagcagggtactgaacatgtgaatccacaaccgttatctgctgtggtacctattaaatcaggtcaacctgtattggcatcatgcaaggaagtcgctggagggaaaactgtcaatgagattcaaacagtctctgaatcttcaaagcacactgaagagtcatcaggtatgttcgttggaggaatgcaatttgatctactttgaataatatattacctctggatagaaataaagcttaaataatagatcacattttttgtgtcattataggggaaaggcatctgcttaatgttccagtaatggatgctataaaggaatctttgggtaagatttagatgttgtatgctcgattcatgtgtgtcacacacaagtagattcagttattttattttggggcatgacaaattcagcacgctcgttgtcaagatagcatctgtacaacactatatatgccccttctgccctcgatgacttattttctatcaagaacaatcactaaatggatttgtatctttaggtcccaaagagcagcctaatgctacaaatagcaagcaacaaacttttatggaaccaccgggtaatacataattccattatttgacatgcttagtattaaccctctagttaatgctgttgatatgaatatttagaaagcacagaacaagctgtgcagctggacacagagagagacatttccaaaggagctgatgactcaaagtcagaagcctcaggaggtaaaaatgtgataccctctacttttaatgtttttattggcacctagagtaacgttaaaagctttgattctatgggcatatgttctgagcaaatatgtttgtttattggctcaaagataatcctttgcctgcacaagcttttttttccttgtgtgtaaccattgatttgctgttagtactttgttgtgtgccatacataagctagattgtgttgctaacataaatccttttcctcgtgtgtaaccattgatttgctgctagtactatgttgtgttccccatacataagctagattgtgttgctaacataaatccttctccttagtcgtgtgtaaccattgattttctgctagttctttgttgtgtgccttacataagcagtgatgctaacaataaccattttccttggattgtgttctaaacataaacccctcttttatttcaggaactgcacctccggtagaggcttcaaccgcagtacataatccccaaggtaaccttctacacctcttgggaacattttattattatctattatttactgcaagaactaacaaacttgctgttacattgaaaatcaaaattccagatgacagtcatgaaatgaaggttgacaacaaatgaaagcagcgcttgagaaagacaaaatgattcttaatgttaggtgaaagcttcaaatccagattgtttctgccaagtcttactataaatggctggatgccaaaggcgtagactcgtactctaggatatatacttgtctttcgcttttatttgtcttccttataaggatacttgagctatctttcattttcattcgtcttccatttaaggatacttgaaccttttaataatgatgtaaagccatacaaaaaagttacttcatacttggaacaaaaagaaatgagaaaaaacttggaaggactaggccccatataggaaaatggcatatctgaatcgaaagcatttgtaccatggcccttgtgataattaagtaacagaaggcaagctgttattg</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060478.1 RefSeq:Os04g0626000]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 4]]
 
−
[[Category:Chromosome 4]]
 

Latest revision as of 08:06, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information