Difference between revisions of "Os05g0204600"

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Please input one-sentence summary here.
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The rice '''''Os05g0204600''''' was reported as '''''OsBBX14''''' in 2016 <ref name="ref1" /> by researchers from China.
  
 
==Annotated Information==
 
==Annotated Information==
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===Gene Symbol===
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*'''''Os05g0204600''''' '''''<=>''''' '''''OsBBX14''''' '''''BBX14'''''
 
===Function===
 
===Function===
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Please input function information here.
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*'''''OsBBX14''''' regulates heading date differently under LD and SD conditions.
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===Phenotypic analysis===
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*'''''OsBBX14'''''-overexpression (OsBBX14-OX) lines exhibited delayed heading date under long-day (LD) and short-day (SD) conditions, whereas RNAi lines of OsBBX14 lines had similar heading dates to the WT.
  
 
===Expression===
 
===Expression===
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Please input expression information here.
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*'''''OsBBX14''''' is highly expressed in flag leaf blades.
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*'''''OsBBX14''''' expression shows a diurnal rhythm under photoperiodic conditions and subsequent continuous white light.
  
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===Evolution===
 
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Please input evolution information here.
 
  
 
You can also add sub-section(s) at will.
 
You can also add sub-section(s) at will.
  
 
==Labs working on this gene==
 
==Labs working on this gene==
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Please input related labs here.
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*Shandong Rice Research Institute, Shandong Academy of Agricultural Sciences, Jinan 250100, PR China
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*College of Life Science, Shandong Normal University, Jinan 250014, PR China
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*Institute of Genetics and Developmental Biology, the Chinese Academy of Sciences, Beijing 100190, PR China
  
 
==References==
 
==References==
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Please input cited references here.
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<references>
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* <ref name="ref1">
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Bai B, Zhao J, Li Y, Zhang F, Zhou J, Chen F, Xie X. OsBBX14 delays heading date by repressing florigen gene expression under long and short-day conditions in rice. Plant Sci. 2016 Jun;247:25-34. doi: 10.1016/j.plantsci.2016.02.017. Epub 2016 Feb 27. PubMed PMID: 27095397.
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</ref>
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</references>
  
 
==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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GeneName = Os05g0204600|
 
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Description = Zinc finger, B-box domain containing protein|
 
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Version = NM_001061426.1 GI:115462582 GeneID:4338069|
 
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Length = 2535 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0204600, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
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AP = Chromosome 5:6496805..6499339|
 
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CDS = 6496929..6497261,6497339..6497854,6498255..6498542|
 
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GCID = <gbrowseImage1>
 
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name=NC_008398:6496805..6499339
 
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source=RiceChromosome05
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008398:6496805..6499339
 
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source=RiceChromosome05
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atgtcgcctcctcctccaccatattaccaccacctcctcctcctccgctcctcgcccaccaccactggaggaggagctcgggttcttgccgcggcggagctcgcacgcatgaagctactgtgcagcgcgtgcgaggcggcggaggccagcgtcctctgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaaccgcctcgccgggaagcacctccgcctccctctcctctcccccgcctcctcctcctcctcctccgccgccgccctcgcgccgccgccgccgtcgccgcccaagtgcgacatatgccaggagagccacgcgtacttcttctgcctcgaggaccgcgcgctgctgtgccggagctgcgacgtggcggtgcacacggccaacgccttcgtctccgcgcaccgccgtttcctcctcaccggcgtgcaggtcgggcaggagcaggacgagcactcccctgacccgcctgagccgtctcctcctccgccgccgccgccgcctgcatccaagagcgaccacccggcgccgctctacggcgagggcggaggagggttcagctgggacgccgccgactcgccggccgcgggcggcctccccgactggtcggccgtcgtcgaccagttcggctccccgccgccgccgcgccacacggacaccgcgaccgtgacgaccccgccgccgaccaagaggagcccacgcgcgccggcgttcggcggccagggcggcatgatggattggcccctcggcgagttcttcggcggcttcaccgacttcaccggcggctttggcttcggcttcggcgacagtggcacctccaaggctgacagcgggaagctgggagggagcacggacggctcgccgtactaccggtcgtcatcggaagatgaccggaacgccgacgagctcttcgggcaggtaccagagatccagtggtcggtgccggagctcccctcgccgccgacggcctccggcctccactggcaacgccatccagccgccactcacggcggcggcggcggcggacccgacaccaccgccttcgtccccgacatctgctcccccgacagctgcttcccggccaccacctccaaacgccggaggcaataa</cdnaseq>|
 
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AA = <aaseq>MSPPPPPYYHHLLLLRSSPTTTGGGARVLAAAELARMKLLCSAC                    EAAEASVLCCADEAALCARCDRDIHAANRLAGKHLRLPLLSPASSSSSSAAALAPPPP                    SPPKCDICQESHAYFFCLEDRALLCRSCDVAVHTANAFVSAHRRFLLTGVQVGQEQDE                    HSPDPPEPSPPPPPPPPASKSDHPAPLYGEGGGGFSWDAADSPAAGGLPDWSAVVDQF                    GSPPPPRHTDTATVTTPPPTKRSPRAPAFGGQGGMMDWPLGEFFGGFTDFTGGFGFGF                    GDSGTSKADSGKLGGSTDGSPYYRSSSEDDRNADELFGQVPEIQWSVPELPSPPTASG                    LHWQRHPAATHGGGGGGPDTTAFVPDICSPDSCFPATTSKRRRQ</aaseq>|
 
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DNA = <dnaseqindica>125..457#535..1050#1451..1738#caaaaaaaaacaatttgtgcggccattaggcgttgagacctcggcgaatggcagccggcgacgtcgtcccacctccaccgcgcccacgaatccattccattccattctccatcgccccccacccatgtcgcctcctcctccaccatattaccaccacctcctcctcctccgctcctcgcccaccaccactggaggaggagctcgggttcttgccgcggcggagctcgcacgcatgaagctactgtgcagcgcgtgcgaggcggcggaggccagcgtcctctgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaaccgcctcgccgggaagcacctccgcctccctctcctctcccccgcctcctcctcctcctcctccgccgccgccctcgcgccgccgccgccgtcgccgcccaagtgcgacatatgccaggtaggtgttcgatcggtggtgcttgtttgttcttgttggatcttggattgggctgatcggtgattgctcgtcttcaggagagccacgcgtacttcttctgcctcgaggaccgcgcgctgctgtgccggagctgcgacgtggcggtgcacacggccaacgccttcgtctccgcgcaccgccgtttcctcctcaccggcgtgcaggtcgggcaggagcaggacgagcactcccctgacccgcctgagccgtctcctcctccgccgccgccgccgcctgcatccaagagcgaccacccggcgccgctctacggcgagggcggaggagggttcagctgggacgccgccgactcgccggccgcgggcggcctccccgactggtcggccgtcgtcgaccagttcggctccccgccgccgccgcgccacacggacaccgcgaccgtgacgaccccgccgccgaccaagaggagcccacgcgcgccggcgttcggcggccagggcggcatgatggattggcccctcggcgagttcttcggcggcttcaccgacttcaccggcggctttggcttcggcttcggcgacagtggcacctccaaggtcactactcctttctcctcgtcgccgcttcaaatttcgctgaatttccccacatttcaaactcaattcgatcgatttcttccacgcattgcaatcaccaccactaatcggcacaatatatacaacttcttttctaaaaaaaataaagaattactagatacaatttctatttccaaattttggccggatacaattttctttttgaaattctcgcaatatatactatttaaactcagaagatgcatacaccattgtacacgtaacatcacaattacacctcaacctttatgaatacatcgtctaatattatactataagatacggaaactagtgatatatcctgatcttggtaaaatcctattgaaataaaattttgtcgtgtcattgatggatggaccaggctgacagcgggaagctgggagggagcacggacggctcgccgtactaccggtcgtcatcggaagatgaccggaacgccgacgagctcttcgggcaggtaccagagatccagtggtcggtgccggagctcccctcgccgccgacggcctccggcctccactggcaacgccatccagccgccactcacggcggcggcggcggcggacccgacaccaccgccttcgtccccgacatctgctcccccgacagctgcttcccggccaccacctccaaacgccggaggcaataatgctagctagctaatagctatgtccagaggttgaagacgacgacgacgacgacgaccagccatgtgagtgtgactgcgattgctaatagctcgagacgctgacgtgatcgtgtgtggtaccacctttcatggcgatggcgccaactacaatgttaggtaggagaagctttctactcgtctggtggttggttggttggttgttgacgatgatgatctgttgccatttccggcgacatcgaggcggaaacagatctctctgattttgagtgcctgacatatgggtttcatgtctaatgggttcttatattagcgacccacattagcagtattgtagagaagacttgttgaaaacagccgcaatcagcattggctgacaaatacagttgggggagatcgatggaactacagtgtacagtctatgctctgcagcatctgattctgatcctgaagtctggaaagaggaagaagaagattagaaagaagagaggcctctgctttttcgatggccgaaactgagatgcacctcgctaattggtgggcagtggacaggataggataggggccatgtgatggattgatggtgatgctctactttgttcagaacagaagtctctgaattttggttggatcacagaaacttgtaaaagattcttgcatgtgtacagaagttttatactacagtagttagatagaaacatggatggatccgtgagaaaagaaaaatgctggtaatgttgtattgtactagtaaaagaaaatgttatatgtttttaactcggctgattcattctttttcg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061426.1 RefSeq:Os05g0204600]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 03:27, 2 June 2017

The rice Os05g0204600 was reported as OsBBX14 in 2016 [1] by researchers from China.

Annotated Information

Gene Symbol

  • Os05g0204600 <=> OsBBX14 BBX14

Function

  • OsBBX14 regulates heading date differently under LD and SD conditions.

Phenotypic analysis

  • OsBBX14-overexpression (OsBBX14-OX) lines exhibited delayed heading date under long-day (LD) and short-day (SD) conditions, whereas RNAi lines of OsBBX14 lines had similar heading dates to the WT.

Expression

  • OsBBX14 is highly expressed in flag leaf blades.
  • OsBBX14 expression shows a diurnal rhythm under photoperiodic conditions and subsequent continuous white light.


You can also add sub-section(s) at will.

Labs working on this gene

  • Shandong Rice Research Institute, Shandong Academy of Agricultural Sciences, Jinan 250100, PR China
  • College of Life Science, Shandong Normal University, Jinan 250014, PR China
  • Institute of Genetics and Developmental Biology, the Chinese Academy of Sciences, Beijing 100190, PR China

References

  1. ↑ Bai B, Zhao J, Li Y, Zhang F, Zhou J, Chen F, Xie X. OsBBX14 delays heading date by repressing florigen gene expression under long and short-day conditions in rice. Plant Sci. 2016 Jun;247:25-34. doi: 10.1016/j.plantsci.2016.02.017. Epub 2016 Feb 27. PubMed PMID: 27095397.

Structured Information