Difference between revisions of "Os05g0252000"

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(Created page with "{{JaponicaGene| GeneName = Os05g0252000| Description = Oligopeptide transporter OPT superfamily protein| Version = NM_001061567.1 GI:115462864 GeneID:4338224| Length = 576...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os05g0252000|
 
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Description = Oligopeptide transporter OPT superfamily protein|
 
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Version = NM_001061567.1 GI:115462864 GeneID:4338224|
 
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Length = 5768 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0252000, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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Please input expression information here.
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AP = Chromosome 5:9234839..9240606|
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CDS = 9235109..9236248,9236833..9237019,9237574..9237708,9237804..9237901,9239724..9239890<br>,9240173..9240506|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008398:9234839..9240606
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source=RiceChromosome05
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008398:9234839..9240606
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source=RiceChromosome05
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggacgcgtcgatcggcgatccgaggctgacgtcggtggaggcggcgttcgagaagaacccgctgccgggcttcagctggctggtgacgccgcgggccatggccgtcgcggtgctactcgggatcgtcttctgcttcgtcggcatgaggatccagatgatgaccgggttcgtgccggcgctcaacatgcccgtcaccgtcctcagcttcttcctcctcaaggtgctcgccaggcagctgcagaagtggcgattgaccgtggtgcccttcacgcgccaggagaacatgttcctcatcacttgcgtcatcacctgccttaacctagccatcactggtggtttcgcaaccgctctcactggaatgggtactatagtggccaaaacacttgctgatgatctagatccaagagatattatcgactatataccaacaggaaaattgattatatactttttccttattggtatggcaggggtattgtctaatattccattaaaccagatcatgattatcgactaccaattactattcccaacaggatcggtcataggacaccttattaatagctttcacactcctgaaggtgcttatatagcaaaaatgcaggttatgactattttcaaagtattttttggtagtttttcttggtctatattccaatggttctattcttcaggcagtggttgtggattttcaagctttccaacgtttggactggaactatataaacgcagattctacattgatttctctgcaacatatattggtgtaggaatgatgtgcccacatatagtcaattttgggttacttttcggggccatcatctcttggggatttctatatccttaccttgaaactaaacatggggagtggtatcaaactgatagcccttcaaacttagacggactcaatggatacaaggtgttcatcagcgtgacactgatcgtcactgacggcctgataaactttctgatactcgtgacttcagctgcaattaacttctaccatataaggcaacagcaacagcaaacgtcagggctggccagctacatcagcaagaaccctagcatgaactacgacgaacgcaaaaggatcgagatgttcttgtccagcaagatcccaatgttcgtgccggtggcggcctacgtcgcatggacggccatcagcatggtcgcgatgccggccatgttcgaccagatcaagtactaccacgtcggcgtgctctacctcgccatacccgtggtcggcttctgcaacacctacgcgacggggctcaccgactggtcggtgtcgaacacctacgccaagttctcccccttcatcttcgcggcgtggatcgccaggccgggcgccatcgtcgccagcctcctcgtcagcgggatcaccatggcgtcgctgcacgtctcgtcgcaggcgatgcaggacctcaagtcggcgcacatgacgctgacgtcgccgcgcgccatgatcgccgggcaggtgttcggcgtggcgctcagctccgtggtcagcccctgcatcttccgcgcgttcgagaaggcggcgaagcccggggcgccgctggggtccaaggactccgtctacccgtgcccctacgccgggctgtaccgcgccatctgcatcatcggcatgggaggggtgaagggcctcccaaagtactgcgtcgagctctgcgtcatcgccgtcctggtgaccatcgccatcgacgccctggtgctggtctcgcagctcaaggggtggaggctccacctctacatcccgagcatgacggtgatcgcgctgccgttcttcgccgggtcgtacttcaccctcgacatgtgcctgggcggcctgctgctgctcctctggaagaagatcgacaccatgagcgccgagatcctgtcggccgccgtcgcagcgggcttgatctgcggcgaggggctcttcacgctgccatcggcgttgctcaacatgttcaaggtgctaccgccgatgtgcatgaagttcttgcccagtggacaagaggttgaggtggtggactcattcctgaacagctcgggaggaacagtacccaagacatga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MDASIGDPRLTSVEAAFEKNPLPGFSWLVTPRAMAVAVLLGIVF                    CFVGMRIQMMTGFVPALNMPVTVLSFFLLKVLARQLQKWRLTVVPFTRQENMFLITCV                    ITCLNLAITGGFATALTGMGTIVAKTLADDLDPRDIIDYIPTGKLIIYFFLIGMAGVL                    SNIPLNQIMIIDYQLLFPTGSVIGHLINSFHTPEGAYIAKMQVMTIFKVFFGSFSWSI                    FQWFYSSGSGCGFSSFPTFGLELYKRRFYIDFSATYIGVGMMCPHIVNFGLLFGAIIS                    WGFLYPYLETKHGEWYQTDSPSNLDGLNGYKVFISVTLIVTDGLINFLILVTSAAINF                    YHIRQQQQQTSGLASYISKNPSMNYDERKRIEMFLSSKIPMFVPVAAYVAWTAISMVA                    MPAMFDQIKYYHVGVLYLAIPVVGFCNTYATGLTDWSVSNTYAKFSPFIFAAWIARPG                    AIVASLLVSGITMASLHVSSQAMQDLKSAHMTLTSPRAMIAGQVFGVALSSVVSPCIF                    RAFEKAAKPGAPLGSKDSVYPCPYAGLYRAICIIGMGGVKGLPKYCVELCVIAVLVTI                    AIDALVLVSQLKGWRLHLYIPSMTVIALPFFAGSYFTLDMCLGGLLLLLWKKIDTMSA                    EILSAAVAAGLICGEGLFTLPSALLNMFKVLPPMCMKFLPSGQEVEVVDSFLNSSGGT                    VPKT</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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DNA = <dnaseqindica>4359..5498#3588..3774#2899..3033#2706..2803#717..883#101..434#atcgcaaacactaccccaaaagcccccaaggacctcgctcgctcgctcgctctccacatcgagcaagagctagcaggaggagctttgatcgccaggcgccatggacgcgtcgatcggcgatccgaggctgacgtcggtggaggcggcgttcgagaagaacccgctgccgggcttcagctggctggtgacgccgcgggccatggccgtcgcggtgctactcgggatcgtcttctgcttcgtcggcatgaggatccagatgatgaccgggttcgtgccggcgctcaacatgcccgtcaccgtcctcagcttcttcctcctcaaggtgctcgccaggcagctgcagaagtggcgattgaccgtggtgcccttcacgcgccaggagaacatgttcctcatcacttgcgtcatcacctgccttaacctagccatcactggtaagcattagtcaccataatatatacatataaaattcatgagtaaaatgttgcaaaactacacttcttttgtcataattcaaggaaatacgaagaaaaaagactagttgttagatggtatataatatgagctttgttaatggtataccataaaacccatgctttgtcaatagtgtacaatgaattactcatatttttctgaaacaacatttatagccatttttttttcattttgcatctcttctagttcaactggtgtattttctggttacctttttttaggtggtttcgcaaccgctctcactggaatgggtactatagtggccaaaacacttgctgatgatctagatccaagagatattatcgactatataccaacaggaaaattgattatatactttttccttattggtatggcaggggtattgtctaatattccattaaaccaggtaattttcatttctttttttttgtacgtgtgtgtgtgagtacagctggacacgcatacattactcacacaggtgtgcattttctatgtgcacttgaaataatgtcagagacccgcatgagtatgtgcatatatatacccccattatattaaaacgcatatgcatcactacaagacttgagagctctgcgggtgaacatactgctgtgtactcattttgggacaacagcactaaattcttctttcgctatgtatttgatgaaactgcatttgtaattccagaagtatgcattcctataagttaacaatatacgctttaataatcattaagctttctttgtcatcgagttgcatttactgacatgatggcttaggcttcgttcgagcgcatgaggaagagagaaagatagttttgttttccgggcgcacgtttcccgaactactaaacggtgtgttttttgcaaaaaatttctataggaaagttgctttaaaaaatcatattaatgcatttttgaagtttaaaataattaatactcaattaatcatgtgctaatggctcacctcgttttgtttatcttcccaatctcctcaatcccctccttgtcaaacacacccttagccttcatgtaaaagcagggcaagaatcaaaaagtggtgctgatgttctttcatggtgtaaatattttttttcatgtatgcattaggtggtgtttggttggagggactaaagtggggctaaactttagtccctctcacaaaaacataagtccctaccatagggacttgtactttcgtgagagggactaaatttagtctctagttcccaaatatagttcccaaatacccccttagtatgagaagctatacggaagttaggttgggttcggcaccccttttcccaacctctctccctcgttttccacgcacacacttttcaaactattaaacggttcgttttttgcaaaaagtttctatatgaaagttgcttaaaaaaaatcaaattaatccatttttgaaaaaaaagctaatacttaattaatcacatgctaatggactgctccgtttttcgtgcgttactgatctagtttggaacaactaaaatatgtacatattttagtggtcaaagttacatcctacaagcctacaactatgtattccatcctatatgctatattagtgagggcgatccactggcaaaatttttcactgtcacatcgaatgtttagacacatgcatggagtattaaatataaacgaaaaaaataactaattacacagattgcgtgtaaattgcgagacggatcttttaagcctaattgctccatgatttgacaatgtggtgctacagtaaacatttgctaatgacggattaattagacttaataaattcgtctcgtagtttacaggaggaatctgtaatttgttttgttattagtctacgtttaatacttcaaatgtgtgttcgtatatccgatgtgacacgccaaaactttacacccatatatctaaacaccccctgaatcaacttaacttagttatttctataaaattcaacatgcatttagtcctgtttggtcagtacacccatcaatacgttacatgaagttagcattccctattaattgctatatttttactcatttagtacttaattaatatgtaggcctgtaaagtgatgttacaagcatgtctaaattcttaatgcaatgagagggatatccatttctaatagtatagttttgtatttatatattatcattcttaatagttttgcattattctcattcttaaatataatttatgagttgtttcgttctactgtagatcatgattatcgactaccaattactattcccaacaggatcggtcataggacaccttattaatagctttcacactcctgaaggtgcttatatagcaaagtaatgaagtcttgtctttttagtgaaaattaaaacactgaatttcatttaactacatattcatattttttgcactaatatttttatgtcaacagaatgcaggttatgactattttcaaagtattttttggtagtttttcttggtctatattccaatggttctattcttcaggcagtggttgtggattttcaagctttccaacgtttggactggaactatataaacgcaggtgatagctatattccttttttaaaataatggtattagtcaatgattgagtatcaacatagtatcatcaacagatgatctagaacggtcacacagaaaattatatatctatacatatagcgtatcacgaaattctcttaacaatttgtatataagttgtgtatccatttccaaaacagaaatgattaaatatgtaagaaacaattagtaatttcacaatatttaatgccaatatagttattatgctgataactagagaaaagtggcaaggagttttcagaatagctagctagacaattgggccatacatgtcatgtgaaactgtgagactgaatatattgctcaatctggtctgcagatttaggggggtagacaataaaaaatgtagtcctgatttcatcgatggaagatggtcttacggattatggaaccatcgaattgctgctaattgtaggaattgatgcagatctcagtaaatccatgtacaaatttaaatatattttaaaggatataagcgtctgaattactaacatattgtattgtgtgtgcctacagattctacattgatttctctgcaacatatattggtgtaggaatgatgtgcccacatatagtcaattttgggttacttttcggggccatcatctcttggggatttctatatccttaccttgaaactaaacatggggagtggtatcaaactgatagcccttcaaacttagacggactcaatggatacaaggtacatttcttttcttaatataatggataaaaatccgacctacctctttatccacagatagccgaaagttacgagagttcttaaactccaagcctcaaaactgaggaactcagagaaacaataaagatatatatacgtaaataataagatcatatcaattgttggatcatctaataagattttatctcactcattttgtggtacgtactaaccaatgcacggaaagaattttgtcccccaaattaatagctacttcctccgtttcataatgtaagtctttctagcattgctcatatctatatgaatatgcgcaatgctagaaaaacttacattatgaaacgggggagtagtactaattgaaatgcatatgaaggtatcaagtatagtaatacctagtatattagaatttttgtcatgatccatgtatccaatttataacttgaacaaaccttctgatataatttccagatatatgcatgcggtggatgaaagccatattaattttggtagtttttcactagtgacacgaactattctaaacttcttgtttttttttctccaatggatataaacttacatggcaggtgttcatcagcgtgacactgatcgtcactgacggcctgataaactttctgatactcgtgacttcagctgcaattaacttctaccatataaggcaacagcaacagcaaacgtcagggctggccagctacatcagcaagaaccctagcatgaactacgacgaacgcaaaaggatcgagatgttcttgtccagcaagatcccaatgttcgtgccggtggcggcctacgtcgcatggacggccatcagcatggtcgcgatgccggccatgttcgaccagatcaagtactaccacgtcggcgtgctctacctcgccatacccgtggtcggcttctgcaacacctacgcgacggggctcaccgactggtcggtgtcgaacacctacgccaagttctcccccttcatcttcgcggcgtggatcgccaggccgggcgccatcgtcgccagcctcctcgtcagcgggatcaccatggcgtcgctgcacgtctcgtcgcaggcgatgcaggacctcaagtcggcgcacatgacgctgacgtcgccgcgcgccatgatcgccgggcaggtgttcggcgtggcgctcagctccgtggtcagcccctgcatcttccgcgcgttcgagaaggcggcgaagcccggggcgccgctggggtccaaggactccgtctacccgtgcccctacgccgggctgtaccgcgccatctgcatcatcggcatgggaggggtgaagggcctcccaaagtactgcgtcgagctctgcgtcatcgccgtcctggtgaccatcgccatcgacgccctggtgctggtctcgcagctcaaggggtggaggctccacctctacatcccgagcatgacggtgatcgcgctgccgttcttcgccgggtcgtacttcaccctcgacatgtgcctgggcggcctgctgctgctcctctggaagaagatcgacaccatgagcgccgagatcctgtcggccgccgtcgcagcgggcttgatctgcggcgaggggctcttcacgctgccatcggcgttgctcaacatgttcaaggtgctaccgccgatgtgcatgaagttcttgcccagtggacaagaggttgaggtggtggactcattcctgaacagctcgggaggaacagtacccaagacatgaccgatcgatgttgagatcaagttaatatatgcactcatcaaattaagattgactgttagtactccttaattggttaccacatctcggtggaaattaagtggtctatgaatcattattgatcattgtaaataatgatgcacgtatcgtattttacatatatatatgtcatgtaattgacataagtagacatgtgagccagctttggttgcaacatgtaagagatgcttgttatagttaagtgccacagaataaagttgtagttgaaatatg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061567.1 RefSeq:Os05g0252000]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 08:23, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information