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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0566900|
| |
| − | Description = Similar to TA9 protein (Fragment)|
| |
| − | Version = NM_001062882.1 GI:115465494 GeneID:4339638|
| |
| − | Length = 8654 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0566900, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:28301727..28310380|
| |
| − | CDS = 28301944..28302139,28304123..28304166,28304414..28304528,28304619..28304694,28305140..28305771<br>,28306382..28306667,28306754..28307024,28307384..28307539,28307777..28308274<br>,28308715..28308999|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:28301727..28310380
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:28301727..28310380
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgaccggcggcggcgcggggggaggaggaggaggagggaaggggggcgcggcggcgggccccgtcccggcggcgtcgaggaagctggtgcagagcctgaaggagatcgtgaaccgcccggaggcggagatctacgcggcgctgcgcgattgcggcatggaccccgacgaggcggtcagccgcctcctctcccaagatacttttcaagaggtaaagagcaagcgcgataagaaaaaagaggttaaagagattcctgagccaagatctcgagcggcaagtaatgctgccagtcgaggtgtaagaggcggtgcagatcgaggcgggcgaaacagttcttttcactctagctccattgacaatgtggcttcaaggtcaatctcagggcctggtatgacatcaaccaattccactcagaagcaaacaattccaagttccttggtaaacaaaagtgtggttgctgatggaccgtcggtacctgcacaatcatcatctgggtttcagcacggttggtctgggacaccaggtcagttgtcaatggccgatattgtgaaaatgggcaggcctcaggtaaagcagtcctctagcaagcctgcggttactgcagacaaaggatatactggacaatacccatctttgcccagtactgtaaaccagaatttgaaacaatctgctagcacagtttcaccaacaaatcctgaccaggggttacattctgctcaagattctattcatcccaaggatcacaaccactcagcagctgtcaacaagcaggcatatgataatgattggcttccacaggacgagccaccaccaggaaatcaatcagccttgcctgagacatccggtgaccaatcattatatgagtcatcgctacagtcatctacactggttgctggtgtgattaacccccatgaaaattctcatttggatgagaacagatcagctgcattttcttccgagagacacttggaacatcatggaggcgattctgaatatgatgatggactgttgcaagaatcgagtacctatctgcctcagaagaattctcatgcagaagatgaagttgagggctccaattctgatgtagcgttagccactgaaaacttccagggtctaagcctacataatgaagagttagttccaacaaaattagctgaagataaccctgcagttataattcctgatcacctgcaagttaccggctcagactgtgtcactttgagctttggcagttttgaatctggagcattttctgggcttctccctgttccatcaaggagcgctgatgataacaatgtggagttgcctgttatagaggaatctgtacctctagatcaaattgattcaagagatcaagactattatgatagtgccgcagttaattcgtcaggaaatgagaaccttgatactatcataggaactaacatggagaacattgatgtaccttctgtttcacagcctgatgtcctgagacaggaagtgcttgatcattccggtcttcaatataacctaccatctgattcaagtgctgcatatgcaaacactacacagccaagtacaatggagtcctcacaaggaaacaaccaggcgcacactctttcccatctttcaaacttactgcaagcaaattcattacacaacagcctattggggtcaaacattgcacctcttcgggacttggacttcagtttatcacctttgctagcagcacaatcaatgacaaaatataactcagctgcaccaactactactggaccagcaatctccatgcaagagactctgaagccaggagttttctccaacgctcaatctacccaaaatcttccaagtactagtatagcaacggggcctcctctccctcagcaattagtccacccttactctcagcctactgtaccactggcgccttttgcgaatatgattggttatccgtatttggcacagaactaccctgctgcttacctaccatcagctgccttccagcaagcatactcgagtaatggaccattccatcagtctgctgctgctgctgtaccaggagctatgaagtacaatatgaatgtgccgcaattcaagaacaacctatcggctacaagcttacaacagcaaccttcttcagtgatctctggttatggaggatttggaagctctagtaatcttcctggaaatttcactcttaatcagaatgctgcctctgcatcaacaaatcttgggtttgacgaagcattgagcacgccatacaaagatcccagccaatatatggccctccagcagggtgacaattctgcaatgtggcttcatggtgctggttcaagagcaacgtcggcgcttccaccgagtcacttctatggcttccagggacagagtcagcagggtggctttcgtcaggcgcagcaaccgcagcagcactcgcaattcggtggccatgggtatccagctttctaccattctcaaagccaagagcaccaccagaacccggccgagggaggcctgaacggtttccagaatgcccaatcacagccgtctcaccaggggtggcagcagcacaccggctactga</cdnaseq>|
| |
| − | AA = <aaseq>MTGGGAGGGGGGGKGGAAAGPVPAASRKLVQSLKEIVNRPEAEI YAALRDCGMDPDEAVSRLLSQDTFQEVKSKRDKKKEVKEIPEPRSRAASNAASRGVRG GADRGGRNSSFHSSSIDNVASRSISGPGMTSTNSTQKQTIPSSLVNKSVVADGPSVPA QSSSGFQHGWSGTPGQLSMADIVKMGRPQVKQSSSKPAVTADKGYTGQYPSLPSTVNQ NLKQSASTVSPTNPDQGLHSAQDSIHPKDHNHSAAVNKQAYDNDWLPQDEPPPGNQSA LPETSGDQSLYESSLQSSTLVAGVINPHENSHLDENRSAAFSSERHLEHHGGDSEYDD GLLQESSTYLPQKNSHAEDEVEGSNSDVALATENFQGLSLHNEELVPTKLAEDNPAVI IPDHLQVTGSDCVTLSFGSFESGAFSGLLPVPSRSADDNNVELPVIEESVPLDQIDSR DQDYYDSAAVNSSGNENLDTIIGTNMENIDVPSVSQPDVLRQEVLDHSGLQYNLPSDS SAAYANTTQPSTMESSQGNNQAHTLSHLSNLLQANSLHNSLLGSNIAPLRDLDFSLSP LLAAQSMTKYNSAAPTTTGPAISMQETLKPGVFSNAQSTQNLPSTSIATGPPLPQQLV HPYSQPTVPLAPFANMIGYPYLAQNYPAAYLPSAAFQQAYSSNGPFHQSAAAAVPGAM KYNMNVPQFKNNLSATSLQQQPSSVISGYGGFGSSSNLPGNFTLNQNAASASTNLGFD EALSTPYKDPSQYMALQQGDNSAMWLHGAGSRATSALPPSHFYGFQGQSQQGGFRQAQ QPQQHSQFGGHGYPAFYHSQSQEHHQNPAEGGLNGFQNAQSQPSHQGWQQHTGY</aaseq>|
| |
| − | DNA = <dnaseqindica>218..413#2397..2440#2688..2802#2893..2968#3414..4045#4656..4941#5028..5298#5658..5813#6051..6548#6989..7273#gaggaagggttttggaattagaagccgccgttgcgtgggagagcaaagtggaagcagccgaaaccgaaactagccgccgccgccgccttcgcctccgccgcgccgcgccgcaccactcgcccccaaggtccctaggggtttcccgcgcgcggagtgtggggaggaggaggaggaggaggaggaggaggaggcgggggggatctctccggcggcgaggatgaccggcggcggcgcggggggaggaggaggaggagggaaggggggcgcggcggcgggccccgtcccggcggcgtcgaggaagctggtgcagagcctgaaggagatcgtgaaccgcccggaggcggagatctacgcggcgctgcgcgattgcggcatggaccccgacgaggcggtcagccgcctcctctcccaaggtctccgccccctctctctctcgcgcgccctctcccaccccgcgatttcgcgcttgtttcgatgccccctcgcggattcttccctgatgcgcccgcgcctcgagttctcgtcgccgttagggttctagaagattcttacaaccgcgtgcccctctttccgattggggctattcgttacttgccgcgctctgagcgtgcgcaccacggatgggatgagtgggaaggatgcgcctattattttttcttcatgagagtcctgccgatttgtcatgatttatccgtttatgattgtagcatttgatagatttggccctttggggttcgttgaatccgttgtacatttgtagggtttctgtttagggttcctgctaaatgttaacagtggctagcgttttcctattctggagcaggggttaggtcgatcctgcttgttatttataggaatcgatctccttttgtttcttgtctttcggttgtaggaaggagttgagatttttgggaggaaagtcaaacagatgaatactgaacttttttctgaactttgaaagaaacagctatatctttggtaggattatgtaggatagaaggagtggaacgagttcattacttgagatttgctgtttggatcaatttactgacctgtctaggtaaatacaccatgctaaagttagttgttggattggaaaagagatggttgtggtaattttagttaccaggcttgaaaagagtggaatctttagattgggaaaggagatggaccctctggcttctcatattggctatgtttgaaaagtgggaacacattactgttgcttccaaaatggctatttgcattacaatacttgtgaaattaggacttgctgtttctgcagggtggtggttgagttttgtgttcattctcggggacagttcgataggtgttttagtgccttcgtttttgctcttgtcgctctttcctgtgtcatatcttttcataatttataaagaagaatgtgtgcatctctgattgttctatagaaacattccatcatcagtttttaggatgtgttgacaataataacatatggacatggggggaagtgtaactatcatatgtatatgatgaaaggggctattagatgatatttactgaatttcattggtcatatagtggtagtaagcaagaaactcaggtccacctttagcttatttatatcgtagtgtgccatttgaactcgtggctttatttctgtaggataagtttctgagcttgcagtgatttgtggcattagtcttgggctcttctctttgcaaggaggctttttattaattgaaactccatgcattttctttgatctgggaagttgaagaaagattaactgtcagacatagttggtagcctatctattccatctatgatttttccatggcatttttcttggtttgacttttacaacatgttacaagaggcattgtgtatttgtgttataactttcctgaacattgttagtctcctactccccttgactccttggtaatctattgctgctaagtttatgagggatgatggatgagccaggagtgggaattgccaccttaatatacctcatctgtgtagcatgtgaaagtcataatacagcttcctgaaatggcatagaggtgtcatttgggttttatgactactttcttgttcagagtttatatgctgtactgttaccacatattgaatatcttattttctgcacacatacttaatgaatgttcgaggaggcaagtgttaggttgttttgtcaaccttttctaaatttcttctcatattgtcatgccaattttatttttgttcaacattattttttgtatgcctttgttgatcatatcatccagttatttttagtcagtttaaactgtgatctgacaatgcaccccaagataaatcagttatatttatttcagttgctcttgcagttatgttaaaattgatatcttatgtaccgcttttttcagatacttttcaagaggtaaagagcaagcgcgataagaaaaaagaggtgtgccccacatcttgcattgctcgccttattttttgaccagcactcagctttgattcggttgccctatatttattttcatcatcaatagcataaagaaaacattttattcatgtaacaattagtttttgtctgattcccctgcgtctaaattaagcatatggaactaatcttttggagttttggttattttgaaaattctctagccttgatgaacttaccattatagtcatgggcactttcataggttaaagagattcctgagccaagatctcgagcggcaagtaatgctgccagtcgaggtgtaagaggcggtgcagatcgaggcgggcgaaacagttcttttcactctagctccattggtaataggaaaaaccaccatcagtatcttcaaggttatcattggttgtaatttcttttcacattttttttttgttcatttcaatattcagacaatgtggcttcaaggtcaatctcagggcctggtatgacatcaaccaattccactcagaagcaaacaattccaaggtaagagagcttcccttttgttgcatatattttaagaagggcttgtacagcaggtctgcctttttagaaggcataccatttttctagttgtcttttctctggagcctttatctgtttgcatttgatatgatccttttgcattattgttaattctgctgttatgtgtaaaatttcatgcaaacagcataggtttttttacaaacaattctcttgttagatgactatgactcaatagttcatatagttacatataattgttatctgagactatcgtttgtaatgttgtgttagattcaaatgaaccatatggaatatggatgaacttggatgatgcatcccacatgaaagttaatgcatactacaaattttatctgatgcgttgatgatttcataacgccttcttatttcactctggggaattcatgctcttttttatctgctgtagttccttggtaaacaaaagtgtggttgctgatggaccgtcggtacctgcacaatcatcatctgggtttcagcacggttggtctgggacaccaggtcagttgtcaatggccgatattgtgaaaatgggcaggcctcaggtaaagcagtcctctagcaagcctgcggttactgcagacaaaggatatactggacaatacccatctttgcccagtactgtaaaccagaatttgaaacaatctgctagcacagtttcaccaacaaatcctgaccaggggttacattctgctcaagattctattcatcccaaggatcacaaccactcagcagctgtcaacaagcaggcatatgataatgattggcttccacaggacgagccaccaccaggaaatcaatcagccttgcctgagacatccggtgaccaatcattatatgagtcatcgctacagtcatctacactggttgctggtgtgattaacccccatgaaaattctcatttggatgagaacagatcagctgcattttcttccgagagacacttggaacatcatggaggcgattctgaatatgatgatggactgttgcaagaatcgagtacctatctgcctcagaagaattctcatgcagaagatgaaggtgagtgtagatatgagtttatgaatttgcttaactttagcatctccatattctgtcctgctggaataacctggatctttggtgttatgagcttattgcattcgttagcattggaaaaggcagcagacaatttattagtaaatacttttggtattccttccagaatgccattgatacttgcgtaggtgtgagatgcaacttacaccctgtaattgacgttatcaattcctatgttaatctgggtatgttgaatgcatctctgttatgatagggtttagggaggcagttgttgcaactggcaagtaatcaactttactgaacaaaattgatatatgatggttcctgcatctttttagtagtagaataccagtcttcagatttctgatgtcatgctgttactttcttgatgaataatgaactttagactgtcgtgttatccagtattaaaagttctgtaaggcaacaacaggtcatgcagtttattgtgaataggttttacagcatatgttcctttctggttgcttgttcttttcctggacgctgttgcattctggctttggctgtgcatgacctgcatgtgaatactgatttctttttactattcttgcagttgagggctccaattctgatgtagcgttagccactgaaaacttccagggtctaagcctacataatgaagagttagttccaacaaaattagctgaagataaccctgcagttataattcctgatcacctgcaagttaccggctcagactgtgtcactttgagctttggcagttttgaatctggagcattttctgggcttctccctgttccatcaaggagcgctgatgataacaatgtggagttgcctgttatagaggaatctgtacctctagatcaaattgattcaaggttaattaagtttgttcctgccgtctttatttcactccacatattgcttgtgacatgactggaatgccatttttttaatcttgcagagatcaagactattatgatagtgccgcagttaattcgtcaggaaatgagaaccttgatactatcataggaactaacatggagaacattgatgtaccttctgtttcacagcctgatgtcctgagacaggaagtgcttgatcattccggtcttcaatataacctaccatctgattcaagtgctgcatatgcaaacactacacagccaagtacaatggagtcctcacaaggaaacaaccaggcgcacactctttcccatctttcaaacttactggtaaattgttttctttttcctataatcttcacttttcatcattcatgctgaattgctaacagtactaagtagctttagccaaactatgatcttgctacatacagtaagataactagttttaccttgattggaaaagagccaaataaaaaggtgccatatagacccattcttttgctcataactcttgtctcaagatattgaccacagatgtaaatcattgcttcattctggaatgtccagaataacattgggagctggtctttctggataccagtttttctgtcttctgcatatgcatgttattcaagtcagctaattgtgctcctgcataattcttattgaactcgtttattccccagcaagcaaattcattacacaacagcctattggggtcaaacattgcacctcttcgggacttggacttcagtttatcacctttgctagcagcacaatcaatgacaaaatataactcagctgcaccaactactactggaccagcaatctccatgcaagaggtaatttaactacgctggttcactttctcatggtgttttctctggattcatatttcatagaagtataactttaggaagaaaaaggctccacatcctttctttatttgaaagatgaatttacaagggtgtgatggtgttggaattttttattttgtgtgcatatacagttaatcattcagcaacaagtaatctctagttctctaattttcttcacacacatgtacatatttgtttcagactctgaagccaggagttttctccaacgctcaatctacccaaaatcttccaagtactagtatagcaacggggcctcctctccctcagcaattagtccacccttactctcagcctactgtaccactggcgccttttgcgaatatgattggttatccgtatttggcacagaactaccctgctgcttacctaccatcagctgccttccagcaagcatactcgagtaatggaccattccatcagtctgctgctgctgctgtaccaggagctatgaagtacaatatgaatgtgccgcaattcaagaacaacctatcggctacaagcttacaacagcaaccttcttcagtgatctctggttatggaggatttggaagctctagtaatcttcctggaaatttcactcttaatcagaatgctgcctctgcatcaacaaatcttgggtttgacgaagcattgagcacgccatacaaagatcccagccaatatatggccctccagcaggtaacaattgcaagcagcccttgtgtttctttggtaatttatatgctatataataattctgataggcacggctcggttcgaaggttttggatgagtgcttggcttaccggaaaaaacacttaattatcatataattaattaagtactccatttattattacaaatttgaaaaatggatttatttgtattttctaagaaaattctgtatagaatatgctttttcaaaaatcatactccctccatttcatattacaagttactttgggtttgttctacgtcaaaccttttcaagtttgaccaagtttatagaataatatagaaacatttcttacacatatactattaaaaaacaatcaatgatggatttaatgaaagtagtagctatataatctgaaaagaatgggacattagtcacaagttactttgggtattcctttcagggtgacaattctgcaatgtggcttcatggtgctggttcaagagcaacgtcggcgcttccaccgagtcacttctatggcttccagggacagagtcagcagggtggctttcgtcaggcgcagcaaccgcagcagcactcgcaattcggtggccatgggtatccagctttctaccattctcaaagccaagagcaccaccagaacccggccgagggaggcctgaacggtttccagaatgcccaatcacagccgtctcaccaggggtggcagcagcacaccggctactgaggcctttaccctttgttatagttggggttaagttgcttgccgaccatggcgtgcgtgtatcctgaccagctgcagggtttaagcagctcggactagctgagcctgtgcctcgagcgctgaggatggagggtccacgccattcaaccaacagtttcgagagtgtttttaacatgttcgcgtgtgttcgtcagacaagaatgatttgtgctttgttttgatagccgagttattatatgtgcccaagtgcagtcttccttgtaactcttcttgagacctaacaggtcaccgttctgatttctaagattagtatctatcatcttgacctttgctgatgctactttctgattatcacttctggagctgcgtcgatgctttggcttttgctattgcggcaacgcgttcggtgctgctgccggcggtggctgctgctgctgggcggcggtgttggcgatcacgaagtgcagagcactgttggggtctggccggaacgcccacacggcgacgtcgtccttcacctggacgccgcggtcgacgagccttgtggtttctttttgccggattatggtgtggcaattggagagcctcctggtcaactccatggccatcacgtcgagcggggatgcacggtagacgaccacgcgcacggcgagcccggggctcttctcccccttctccctcggctttggttctggcgatttctttttcttgtgcaagaactcctccaccagcttggcggcctcgcgctccgccgctgagaggagcggacagaggcggaggctggcggcggcttgcgggatgaggaagcggctctgctgcgccgacaggtcggaagcctccactcgcttcctgcagatgaagtgcagcggcaggtcgccgcgtaggcctagtagcggcagcagctcgccgcgtatccacgccggcggcgggggagcggcatcgtcatcatctactctttgcggcacggcggcgcgagggacgtgcgccgccaccgcctgcaacgggacggcgtcgatgggctccgctgcaatcggtgcagccgcgtcgatgagcatgggctcccccgcggcggacacttccgccgtggtaccggatgcgctcgtggaatttccaacggcggcggcgctgttcgaggtcgttatcgtcgtcgtctggggggctaattgggcggcagcgtcgccggggctgacggacgacggcgagagcgacaagaagccaggagccacctcttccctgaacctcgcgagcgacgtcgtgacagtcgcccacgactgcaccttctttgcgtccttacgcgctactatcgaactctttcgcttcatagcgttgagctactaataatttaacttgggtttaatctcctctaatcccaaactattttttt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062882.1 RefSeq:Os05g0566900]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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Annotated Information
Function
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Expression
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Structured Information
