Difference between revisions of "Os06g0174800"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
GeneName = Os06g0174800|
 
Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein|
 
Version = NM_001063483.2 GI:297605269 GeneID:4340280|
 
Length = 4726 bp|
 
Definition = Oryza sativa Japonica Group Os06g0174800, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
 
AP = Chromosome 6:3780227..3784952|
 
CDS = 3780227..3781438,3781530..3781747,3782935..3783166,3783344..3784265,3784915..3784952<br>|
 
GCID = <gbrowseImage1>
 
name=NC_008399:3780227..3784952
 
source=RiceChromosome06
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008399:3780227..3784952
 
source=RiceChromosome06
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgcattcctcctcttcctccccgtcgtcctccgttgagatcatcgacgccgacgccttccgctctcgctccaccgaccccgaccaccgccgcgcagacgccgccgccgccgactccccgttcccgaggtccgtcgccgaccacatcgcctcgtctctgcgcacgcaggaagcggtcgacgccgtctgcaagaagtacggtgtcctggcggagttcgccgcgcgccccgccggcgacctgcgcgcgtgctcggcgccgccgccgggcgccgcgtgcgtgtacgcgcgggcgctggaggccgggatgcgcctcccgctgcacccctttgcctgcgagcttctccgccatctcggcgtcgcgccgagccagatcacgcccaacgggtggcgcgtcgtggcggggttcctcctgctctcccaccacgccgccgcgccgccgtcgctcgccgtgttccggcgcttcttcaggctgttcttgtccaagctgaacggctggtaccacttccggggcaagcgcggcgccggcgccgacggggtgctcttcacggggttgcccaagctcaaagggtggaagggaggcttcttcttcgtgtcgtcgccgtcgccatggccgtgccaagtgcgatggggcgggccgccgccgtccaagagctctaccgccgagccggtgctcagcggcgaggagatggaattggcgggaaagcttctgcacttgcatggcggcgccgcggttgatctgaggacgtatctctgcgagagcaacctcgccgcggtgttctcctccaacctcgccggcgccgcaccaccgcagccgccgcctcctcgtcctgctcgtgctaaaggtaagtttcctttctccggcgagttcaacgcacagaaggtgaagaccgagccggagagcgacatgccgtggtggtcgccgttgtccgggaagaagagggggtttgaagcagaggagaataacccgccgccgtcgccgacgccgacgccgcctgctccgcatggcggctcgtggtcgtggtcggcttccggcatgtgttccccgccgccgggcttcgcggcgcacgtgcccgacaagcacgacggcgactcggccgactggaaggccgcgcggcagctgctccaggccatcgtcacgccgtcacgggagcgccggttcccggcggcgaagccctccgacgtcgtcgcgtcgagctacctgacactgcttcaggcggcgaactacgcgtcgttctcgttcggctacgcgctggagctggaggagaagctgcgtgcgcgggagcgcgacgccgccgcggaggcggacgccgtgcggaaggagctcgaggagaaggcgctgcgcgagctcgcggcggcgaaggcggcggcggtgcaggagtacctgcgctccgacgagcacaggcgggagctcgcggcgcacgcgctggagggtgctaagaaggaattgaaaaatgctttggtagagctggataacaagacatatgacagtggactttttgacagtgaatggaaaatcagatatgagatggaaaaggagatggaaaatatttacattcaggaggagatctggtggcagagaagagtggcagagaagaggaggggaaacttgattttacaaggagatgctaatacaacctttttctataagccctgcaaatggaagatggttagacccttctcttcaaatgaagtggacaaagtgatgaagactatgaaaaacaatacagcttctagccctgatgggttgcctgtgggtttttataaacaaatgtggcctcatataagggttttagttaaagagatgttagatgacttacacatgggtgagctggatatagatatgatcaattatggggtgatttctcctttgccaaaaatcagcgatgcaaacacaatcaaacagtatagacccatctatctacaaaatgtgacttttaggatgattgaagtggcaaacaaagtgattagttggtctcaaactgcctttatacctagaaggaatattttagaaggttgttttattttacatgaggtgatgtatgagttgaaaataaaaagggatactgggattatcctcaaaattgactttgagaaggcttatgacagggtaaaatgggattttttgtatgaggtcatggagaaaacgaattttgactccataatggtgggatggataaaaaatataactgaagatgggagagtgagtattaacattaatagtaaacagggacattttttcaaaacttacaggggtttgaggcaaggagaccacttgtctcctatccttttcaatcttgtgggtgatgccttggctgccattttggataaagccaaagaatggggagtccttgaaggtctggttccaaacttagtggatgggggtttgactcaccttcaatacgctgatgatacaatcctattcattaagaattctgatgagaacatccttgcccttaagttcttattattctgctatgaagagatgtcagggatgaagattaattatcagaaaagtgatgtatatgtcataggggtggaggatagtgagggattaagaattgctaatatgctgaattgtaagattggatatggtggtagaaggagaatggagcttggagtttag</cdnaseq>|
 
AA = <aaseq>MHSSSSSPSSSVEIIDADAFRSRSTDPDHRRADAAAADSPFPRS                    VADHIASSLRTQEAVDAVCKKYGVLAEFAARPAGDLRACSAPPPGAACVYARALEAGM                    RLPLHPFACELLRHLGVAPSQITPNGWRVVAGFLLLSHHAAAPPSLAVFRRFFRLFLS                    KLNGWYHFRGKRGAGADGVLFTGLPKLKGWKGGFFFVSSPSPWPCQVRWGGPPPSKSS                    TAEPVLSGEEMELAGKLLHLHGGAAVDLRTYLCESNLAAVFSSNLAGAAPPQPPPPRP                    ARAKGKFPFSGEFNAQKVKTEPESDMPWWSPLSGKKRGFEAEENNPPPSPTPTPPAPH                    GGSWSWSASGMCSPPPGFAAHVPDKHDGDSADWKAARQLLQAIVTPSRERRFPAAKPS                    DVVASSYLTLLQAANYASFSFGYALELEEKLRARERDAAAEADAVRKELEEKALRELA                    AAKAAAVQEYLRSDEHRRELAAHALEGAKKELKNALVELDNKTYDSGLFDSEWKIRYE                    MEKEMENIYIQEEIWWQRRVAEKRRGNLILQGDANTTFFYKPCKWKMVRPFSSNEVDK                    VMKTMKNNTASSPDGLPVGFYKQMWPHIRVLVKEMLDDLHMGELDIDMINYGVISPLP                    KISDANTIKQYRPIYLQNVTFRMIEVANKVISWSQTAFIPRRNILEGCFILHEVMYEL                    KIKRDTGIILKIDFEKAYDRVKWDFLYEVMEKTNFDSIMVGWIKNITEDGRVSININS                    KQGHFFKTYRGLRQGDHLSPILFNLVGDALAAILDKAKEWGVLEGLVPNLVDGGLTHL                    QYADDTILFIKNSDENILALKFLLFCYEEMSGMKINYQKSDVYVIGVEDSEGLRIANM                    LNCKIGYGGRRRMELGV</aaseq>|
 
DNA = <dnaseqindica>1..1212#1304..1521#2709..2940#3118..4039#4689..4726#atgcattcctcctcttcctccccgtcgtcctccgttgagatcatcgacgccgacgccttccgctctcgctccaccgaccccgaccaccgccgcgcagacgccgccgccgccgactccccgttcccgaggtccgtcgccgaccacatcgcctcgtctctgcgcacgcaggaagcggtcgacgccgtctgcaagaagtacggtgtcctggcggagttcgccgcgcgccccgccggcgacctgcgcgcgtgctcggcgccgccgccgggcgccgcgtgcgtgtacgcgcgggcgctggaggccgggatgcgcctcccgctgcacccctttgcctgcgagcttctccgccatctcggcgtcgcgccgagccagatcacgcccaacgggtggcgcgtcgtggcggggttcctcctgctctcccaccacgccgccgcgccgccgtcgctcgccgtgttccggcgcttcttcaggctgttcttgtccaagctgaacggctggtaccacttccggggcaagcgcggcgccggcgccgacggggtgctcttcacggggttgcccaagctcaaagggtggaagggaggcttcttcttcgtgtcgtcgccgtcgccatggccgtgccaagtgcgatggggcgggccgccgccgtccaagagctctaccgccgagccggtgctcagcggcgaggagatggaattggcgggaaagcttctgcacttgcatggcggcgccgcggttgatctgaggacgtatctctgcgagagcaacctcgccgcggtgttctcctccaacctcgccggcgccgcaccaccgcagccgccgcctcctcgtcctgctcgtgctaaaggtaagtttcctttctccggcgagttcaacgcacagaaggtgaagaccgagccggagagcgacatgccgtggtggtcgccgttgtccgggaagaagagggggtttgaagcagaggagaataacccgccgccgtcgccgacgccgacgccgcctgctccgcatggcggctcgtggtcgtggtcggcttccggcatgtgttccccgccgccgggcttcgcggcgcacgtgcccgacaagcacgacggcgactcggccgactggaaggccgcgcggcagctgctccaggccatcgtcacgccgtcacgggagcgccggttcccggcggcgaagccctccgacgtcgtcgcgtcgagctacctgacactgcttcaggtacgcctccgccgcggccgccattgacgcgaaccgctcaagaatcgtcgcgtgcacttgccttcattcatgtcgtcgttgtttggcgcaggcggcgaactacgcgtcgttctcgttcggctacgcgctggagctggaggagaagctgcgtgcgcgggagcgcgacgccgccgcggaggcggacgccgtgcggaaggagctcgaggagaaggcgctgcgcgagctcgcggcggcgaaggcggcggcggtgcaggagtacctgcgctccgacgagcacaggcgggagctcgcggcgcacgcgctggaggggtacgagcgcggcatggagcgtcgcgctccggcgccacccgcccggatacaggtagtgttagataatatatctcatcctgtatcttatcccatattatttccttccaatcggattcgagaacggatatctatttgtatatctaattcatagatattaaatataataaagtaattgaagtattaaaagagatacatcaagaaaaaattatacaatattacatgtgagtatgtaaaatagttattaaccaatcttttatcatattttttatcatatttttaggtgaatcaataataatttttcatacatattttataatacggaacatatgggcggatacatgttttcccgtatcctaacccatatttatggcatgccacatcttaggtactaaaggtttggcaacctgaaaaagcatcaaaacaacccctactagttaaaatttgaagcacccaaccaaaatatattcgtgaatcattttaagcatagtactataaagtcttgttcaacatagttcattcatttcagcccatctcattcacaaaaagagtgaagaaaaattcgagcaaagcaaaaacatctcaaaaccacaaataacaagaaggaatcctgacacaaatcatctatcattctcaacatctcccacaatcataaacaaattaactaaattaaccaaacttgcctgatgttgaggcaatcaagaaagcggggattagataagacaacacacatggagtgacttctatcaaacattctcccgcgaacagtgctggtaaactcgagtagacgggcagcaccaacatccacagttcttaacctcggttgtttttttcttgtgatgcttctccaccttcgcacacagtttcttcgctgtcttgagcatagaacgaagcgaaacttgcgcacggacgaactcgctaccaaacccgccgcctcactacgagggatgaagagagagtaggggtaatgtatttagatttgaaatgggttggtttctacaacagattttaaagagcagatactatctaattggccttatagggtgcagatggggttttggattattctgctcacttgtttgaggagatggctgagggttatagagtgcagagcgggttttagattattggcatgttttgctcacttgtttgaggagatgactgaggggatggagtgctaatctaaacagtgctaagaaggaattgaaaaatgctttggtagagctggataacaagacatatgacagtggactttttgacagtgaatggaaaatcagatatgagatggaaaaggagatggaaaatatttacattcaggaggagatctggtggcagagaagagtggcagagaagaggaggggaaacttgattttacaaggagatgctaatacaacctttttctataagccctgcaaatggaaggtaaaggaaaagccatatcttctcttaaggggatgttaatatcacaaagctctcacaaattaaacaacacatgcatattataaggggttgcttggaaaagaagaaagcagggaagttcatctaagtcctgaaatctggcaagataagttgagactgactgagaaggaaaaagtttagatggttagacccttctcttcaaatgaagtggacaaagtgatgaagactatgaaaaacaatacagcttctagccctgatgggttgcctgtgggtttttataaacaaatgtggcctcatataagggttttagttaaagagatgttagatgacttacacatgggtgagctggatatagatatgatcaattatggggtgatttctcctttgccaaaaatcagcgatgcaaacacaatcaaacagtatagacccatctatctacaaaatgtgacttttaggatgattgaagtggcaaacaaagtgattagttggtctcaaactgcctttatacctagaaggaatattttagaaggttgttttattttacatgaggtgatgtatgagttgaaaataaaaagggatactgggattatcctcaaaattgactttgagaaggcttatgacagggtaaaatgggattttttgtatgaggtcatggagaaaacgaattttgactccataatggtgggatggataaaaaatataactgaagatgggagagtgagtattaacattaatagtaaacagggacattttttcaaaacttacaggggtttgaggcaaggagaccacttgtctcctatccttttcaatcttgtgggtgatgccttggctgccattttggataaagccaaagaatggggagtccttgaaggtctggttccaaacttagtggatgggggtttgactcaccttcaatacgctgatgatacaatcctattcattaagaattctgatgagaacatccttgcccttaagttcttattattctgctatgaagagatgtcagggatgaagattaattatcagaaaagtgatgtatatgtcataggggtggaggatagtgagggattaagaattgctaatatgctgaattgtaagattggtaagatgcctttcacatacttgggtttgcctatgggggttgacagaattgggatgagagacctatctccaatctttcagaaagttgagaagagacttcagtcttggaagagctgccacttgacttatggcggcagggggatcaagattaactcatatttgtctagtgcacccatgtatgctatggttttctaccttttgcttgaggggtttcacaaaaaaaaggacacaattagggggaacttttactggcagggggttggggaaaaaagaaatatcatatgataagatgggatgctccgtgcaagcccaaagagtttgggggaatgggttttttggatactagagcaatgaatctttgcttgctcagtaaatgggttatgaaattggaaagtggagcacctgatgtttgcttggaggtactgagaaggaaatatttgaggaattgtaatttttttcacaaggaatgggagtggtggctctcaattttggatgggtttgttgaaatgcaaagagtggctttctaggctggtcacaaaagaagtgcacagtgggagagatgtgagtttttggaaggatgtttggtgtgataatgtacctttgaaagttatctatttgaaattagtcatgatcaaaatgctactgtcaaggatatggtggtagaaggagaatggagcttggagtttag</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063483.2 RefSeq:Os06g0174800]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 6]]
 
[[Category:Chromosome 6]]
 

Latest revision as of 08:48, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information