|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] |
| − | GeneName = Os06g0178900|
| |
| − | Description = Vacuolar H+-pyrophosphatase (EC 3.6.1.1) (Ovp2)|
| |
| − | Version = NM_001063501.1 GI:115466733 GeneID:4340298|
| |
| − | Length = 4771 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os06g0178900, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
| |
| − | AP = Chromosome 6:3918533..3923303|
| |
| − | CDS = 3918642..3918894,3920289..3920863,3921005..3921384,3921487..3921573,3921659..3921989<br>,3922122..3922532,3922616..3922675,3922772..3922978|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008399:3918533..3923303
| |
| − | source=RiceChromosome06
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008399:3918533..3923303
| |
| − | source=RiceChromosome06
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgatcctctcggcgctcgggaccgaggtgttcatccccgtcgcggccgccgtcggcgtcgcgttcgccgtcgcgcagtggctgctcgtcgcgcgggtgaaggtcaacccggcgcacgcggcggcggccgcggcgtcgggggggagcaagaacggcgggtacggggactacctcatcgaggaggaggaggggctcaacgaccacaacgtcgtcgtcaagtgccacgagatccagaccgccatctccgaaggagcaacatcatttctcttcacggagtaccaatatgttggtatcttcatgtcaatcttcgctgtcgtgatcttcctcttccttggttcagtcgagggattcagtacaaagagccagccttgcacatacagcaaggacaagtactgcaagcctgcccttttcaacgcgctctttagcactgcatctttcttgctgggagcgatcacctctttggtctctggttaccttggaatgaagatcgccacatttgccaatgccagaactaccctggaagcaaggaagggtgttgggaaggcatttatcattgctttccgctctggtgctgttatgggcttcttgctggcatcaagtggtcttgtggttctttacatcgccattaatgtatttaagttgtattatggtgatgactgggaaggtctttttgagtctatcactggttatggtcttggtggatcttccatggctctcttcggaagggttggtggaggtatttacactaaggctgctgatgtgggtgctgatcttgttggcaaggttgagaggaacatccctgaagatgatcccaggaacccagctgtgattgctgacaatgtcggtgacaatgttggtgatattgctggaatgggatcagatctctttgggtcatacgccgaatcatcctgtgctgctcttgttgttgcatctatctcatcttttggaatcaaccatgatttcactgggatgtgctacccactgcttgtcagctctgttggcatcattgtttgtttgatcaccacactctttgcaactgatttctttgagatcaaggcagtgaaagaaattgaacctgctctgaagaagcagctcatcatctccactgctttgatgactgttggtattgcaataatcagctggttggcccttccagcaaagttcaccatcttcaattttggtgctcagaaggaagttaccaactggggcttgttcttctgcgttgcaattggtctgtgggctggtctgatcattggttttgtgacagagtactacactagcaatgcatacagccctgtgcaagatgttgcagattcctgcagaactggtgctgccactaatgtcatatttggtcttgctctgggatacaaatcagttatcatcccaatttttgctattgctgtcagcatatatgttagtttctctattgctgcaatgtacggcatagccgttgccgctcttggcatgctaagcaccattgcaacaggccttgccattgatgcttatggtcctatcagtgacaatgctggtggtattgccgagatggctggtatgagccacagaatccgtgagagaactgatgcccttgatgctgctggcaacacaactgctgctattgggaagggttttgccattggatcagctgctctggtgtcccttgcactttttggtgccttcgtcagcagagctggagtgaaggttgttgatgtcctgtctccaaaggtcttcatcggtttgattgttggagccatgctcccgtactggttctctgccatgaccatgaagagtgttggaagtgccgccctcaagatggttgaggaggttcggaggcaattcaactccattcctgggctaatggagggaactggcaagcctgactatgccacctgcgtcaagatctccactgatgcttccatcaaggagatgattccccctggtgctttggtgatgctcacccccctcatcgtcggaactctctttggtgtggagaccctgtctggtgttctggctggtgctcttgtttccggagttcagatcgccatctcggcctccaacactggtggcgcatgggataacgcaaagaagtacattgaggctggtgccagtgagcatgctcggacccttggtcccaagggatcagactgccacaaggccgccgtgatcggtgacaccattggagaccccctcaaggacacatcaggcccgtcgctcaacatcctcatcaagctcatggccgtcgagtcccttgtgtttgcgcctttcttcgccacacacggtggtctgctgttcaagtggttctaa</cdnaseq>|
| |
| − | AA = <aaseq>MAILSALGTEVFIPVAAAVGVAFAVAQWLLVARVKVNPAHAAAA AASGGSKNGGYGDYLIEEEEGLNDHNVVVKCHEIQTAISEGATSFLFTEYQYVGIFMS IFAVVIFLFLGSVEGFSTKSQPCTYSKDKYCKPALFNALFSTASFLLGAITSLVSGYL GMKIATFANARTTLEARKGVGKAFIIAFRSGAVMGFLLASSGLVVLYIAINVFKLYYG DDWEGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPA VIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTGMCYPLLVSSV GIIVCLITTLFATDFFEIKAVKEIEPALKKQLIISTALMTVGIAIISWLALPAKFTIF NFGAQKEVTNWGLFFCVAIGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVI FGLALGYKSVIIPIFAIAVSIYVSFSIAAMYGIAVAALGMLSTIATGLAIDAYGPISD NAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGV KVVDVLSPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGTG KPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLFGVETLSGVLAGALVSGVQIAI SASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNI LIKLMAVESLVFAPFFATHGGLLFKWF</aaseq>|
| |
| − | DNA = <dnaseqindica>110..362#1757..2331#2473..2852#2955..3041#3127..3457#3590..4000#4084..4143#4240..4446#gagtgtgcagagcgagagacgcgtcacctcctccccgccgccgccgccgccgcctcgcctccgttgcaaccgtagtagggttagggttttcgtggtgggcgccgccgccatggcgatcctctcggcgctcgggaccgaggtgttcatccccgtcgcggccgccgtcggcgtcgcgttcgccgtcgcgcagtggctgctcgtcgcgcgggtgaaggtcaacccggcgcacgcggcggcggccgcggcgtcgggggggagcaagaacggcgggtacggggactacctcatcgaggaggaggaggggctcaacgaccacaacgtcgtcgtcaagtgccacgagatccagaccgccatctccgaaggtgaatctctctctccctctcagatctggccgcgtcgcctggttcggctagatctgatcgttcccgtggccgtttcggccgagacgatgcggctttcgcgcgttcttcgtggggattacttatattattaaatcattcttaagtcatttcgtatctgggcgtatgattttgtcgatgagcgcgacattgcaggggcaaaatggttcgttttttggttctattctcccttgattagttagtttcaataacgacgatctgatgggaaaacttccaaaagctcctcaaaaaagatggctttgtgaatgaagaagaatcatgaaaaatccgagatgaaccgctgaagtgatgttaaagattggaggttttaggcgatggaagccaaatcttctcgttggggcttttggtttctttgtgggggctgccaaatagtgctactttgtccaaatatgtgctttcctgatattttagtctctcctggtttgccccaaatctgtattttttctagtgggggctcctcctgtgttgatatgttttctttttttgttttcgttagaattcacttttgtctatgccactgagtgggggctggcaaatatttttctttgccccaagacggtagatctgcacattagttgggctaaatcgagggttcagtaatgagttcttttaatgcttgaagcggtgctcttaccctgtgtcggttttgtaggaaagatgtagctttcagtagtagtacaaattctgcagtggaaggcgcgtgagggatctgtctgtcccaacttaacaagttgatctagtcagtattaggctgacttaagttttacattaatgtaaacctgggctccaatcttctggtgcccggtagatctagtctggaaacgtaaggataccaagccatatgtcaccaacgtgtcagcttagcacatgacctatgaatttgctgtcttcatcagtatggatggcttaatgctcttcagatgcgtgtcccattagtgcggtttgtttatgtatgtcaccaatcttggctcatgccttctttctttgattgtgatggggacacaggaagagctacttctggaatatctgctaggatttggacatggggcttgtcacttgctctcgggtggtttacggcttatttttttctagtatatatgtgcacatgctcttcttccattttttgctgatgtcagaagataaaatccgaccaaagcttattatggtgttcagtgtcatgtcatgtgcattggtttgacaaatcaatattctgtattatttttcatagtttgtatgggaattgcaatgtaatttagcaaaactttgcttatactgacactaagtcgtgttgaatgatatgattttttttgtaacaattgccttctttttatgagcaggagcaacatcatttctcttcacggagtaccaatatgttggtatcttcatgtcaatcttcgctgtcgtgatcttcctcttccttggttcagtcgagggattcagtacaaagagccagccttgcacatacagcaaggacaagtactgcaagcctgcccttttcaacgcgctctttagcactgcatctttcttgctgggagcgatcacctctttggtctctggttaccttggaatgaagatcgccacatttgccaatgccagaactaccctggaagcaaggaagggtgttgggaaggcatttatcattgctttccgctctggtgctgttatgggcttcttgctggcatcaagtggtcttgtggttctttacatcgccattaatgtatttaagttgtattatggtgatgactgggaaggtctttttgagtctatcactggttatggtcttggtggatcttccatggctctcttcggaagggttggtggaggtatttacactaaggctgctgatgtgggtgctgatcttgttggcaaggttgagaggaacatccctgaagatgatcccaggaacccagctgtgagttttctcatctctttgtcaggctattaattttattttagggaagttaaggggataatcgtatcagtcccgcagtattgtagtgactattatagttcatgatcttccctctctgaacttcctcttcttgttttgcaggtgattgctgacaatgtcggtgacaatgttggtgatattgctggaatgggatcagatctctttgggtcatacgccgaatcatcctgtgctgctcttgttgttgcatctatctcatcttttggaatcaaccatgatttcactgggatgtgctacccactgcttgtcagctctgttggcatcattgtttgtttgatcaccacactctttgcaactgatttctttgagatcaaggcagtgaaagaaattgaacctgctctgaagaagcagctcatcatctccactgctttgatgactgttggtattgcaataatcagctggttggcccttccagcaaagttcaccatcttcaattttggtgctcagaaggaagttaccaactggtaaactacttgtctaactttctttgtttgtgaaatgttgtctagttttgttatttgtttgtgaaatgtattctttctgattaatttgctgtggtttcacaggggcttgttcttctgcgttgcaattggtctgtgggctggtctgatcattggttttgtgacagagtactacactagcaatgcatacaggtaagaaacctattagtttccaattatgatgtctttcaccattgttacattacatgttttaatccctactgcttctttttggcagccctgtgcaagatgttgcagattcctgcagaactggtgctgccactaatgtcatatttggtcttgctctgggatacaaatcagttatcatcccaatttttgctattgctgtcagcatatatgttagtttctctattgctgcaatgtacggcatagccgttgccgctcttggcatgctaagcaccattgcaacaggccttgccattgatgcttatggtcctatcagtgacaatgctggtggtattgccgagatggctggtatgagccacagaatccgtgagagaactgatgcccttgatgctgctggcaacacaactgctgctattgggaaggtacaatcatgtgcttactcttgatgagcattcccaagctattattagttaattaagcattagaattagtgggtgcttaggaagaactgttatgttggttctgtgatttgatccttttatattcttttgtagggttttgccattggatcagctgctctggtgtcccttgcactttttggtgccttcgtcagcagagctggagtgaaggttgttgatgtcctgtctccaaaggtcttcatcggtttgattgttggagccatgctcccgtactggttctctgccatgaccatgaagagtgttggaagtgccgccctcaagatggttgaggaggttcggaggcaattcaactccattcctgggctaatggagggaactggcaagcctgactatgccacctgcgtcaagatctccactgatgcttccatcaaggagatgattccccctggtgctttggtgatgctcacccccctcatcgtcggaactctctttggtgtggagaccctgtctggtgttctggctggtgctcttgtttccggagttcaggttggcattatgttctctctccctcattatgtgcttgtgcgagtttgctagttcaatggatctataatcttcctcttctccagatcgccatctcggcctccaacactggtggcgcatgggataacgcaaagaagtacattgaggtaaatgttcagaaaatcctgattgatcatgttttgcaactcattatccttcgcgagacttaactttacatcaacttgctccctgttttatttcaggctggtgccagtgagcatgctcggacccttggtcccaagggatcagactgccacaaggccgccgtgatcggtgacaccattggagaccccctcaaggacacatcaggcccgtcgctcaacatcctcatcaagctcatggccgtcgagtcccttgtgtttgcgcctttcttcgccacacacggtggtctgctgttcaagtggttctaagaacataataccattggcagcagcgctgaaatcttcgacggacatcacgaataacgactgccagtgtacgttgtgcttgggaatcgcccgcaccgtttctttttgggtctcatgttgtttcaggattgctgttgtcttatctttggcctcttgggagttgttaccttagccttactgttagcttcacttagaagagaccagagtccagatgttctcccatctctggtgcgtgtctggcaaattttcctcgtcccatgatgacgacgataatgtttgaactcttgaacaatgagatgatgattgttgcatgttagttactggtggt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063501.1 RefSeq:Os06g0178900]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 6]]
| |
| − | [[Category:Chromosome 6]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
