Difference between revisions of "Os06g0332400"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
−
GeneName = Os06g0332400|
 
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Description = VHS domain containing protein|
 
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Version = NM_001064079.1 GI:115467889 GeneID:4340925|
 
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Length = 8093 bp|
 
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Definition = Oryza sativa Japonica Group Os06g0332400, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
 
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AP = Chromosome 6:13230926..13239018|
 
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CDS = 13231067..13231170,13232206..13232284,13233738..13233836,13233908..13234021,13234298..13234458<br>,13234950..13235031,13235176..13235261,13236767..13236946,13237117..13237628<br>,13238048..13238682|
 
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GCID = <gbrowseImage1>
 
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name=NC_008399:13230926..13239018
 
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source=RiceChromosome06
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008399:13230926..13239018
 
−
source=RiceChromosome06
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
−
CDNA = <cdnaseq>atgccgcagtcggtgctcgtcgaccgcgcgacgagcgagtcgctcatcgggcccgactggtccctcaacctcgagatctgcgacatcctcaaccacgacccctcccaagccaaagatgtagtgaagtctatcaagaaacgcattgggcacaagaactcaaagatccagcttctcgcactaacattgctggagacactgattaaaaattgtggagactttgttcatatgcacgttgctgagagggatatactccatgaaatggtgaagatagctaagaaaaagcctgattatcatgtaaaagagaagatactaattctgatagacacttggcaagaagcttttggtggttcccgtgcaagatatccgcaatattatgtagcatatcaagagctcctgcgcgctggagctgtatttcctcaaagaccagacagctctgtgccaatctatactcctccacagactcaacctctacggaatcttcctccagctctgcgtaatactgagcgtcaacaagaagcacctgaatcttcttcaacaccagaagtacctacactgagtttgacagaaatccagaatgcacgtggtgtcatggatgttctttcagagatgttgaatgctattgatcctggcaacagagagggtctaagacaggaggttattgtggaccttgtggatcaatgtcgttcttacaagcagagggtggtacagcttgtcaactcaaccacggacgaggagctgctaagccagggtctttcattgaatgatgatttacagcgtgttcttgcaaaacacgatgcaattgctgcaggcatagcagttcgtgtagaaaaaccaaaatcagtccaggcccgaggggacaagtctccatcaatcaaaccagaaggggcaaaacagccagatcagaggtcttctgaagctgccagtaccgtgactccatttgagcaattagcgcttccagcacctgcatcatccagcagttccaaacctcctgtagaaccagctgttggccctagtattgacctacttagtggtgatgactacttcaagccagaacctgttaattcccaggcccttgtttctgtaggcaatccacctgctgcttcagccaacaataccttggacctggtagacatgtttgcacaaagcaatgttggcaacaacccgaaccctgctgtcacctcttctatgttgaattcaaatcctagtctctctgagccacagctgtatccctcacagcagactgtgccaccacaacagccttctccatactctaatgggttaacttcaaatacaatggcaccgtatgatcaaccctctgacataaacgccacaggttcatggaatagtcaatttgctcatggaatgcttcctccacagcttcctccacaacttcctccacagcaaccaccaaattacggtcaaggtcaagatcagagtggtgatctcccaccaccaccctgggaaactcaacctgcagaaagtgatcaattccagcctgggcaacctcgtgggctagcaatgccatcagggcaaattggaggcattcaatcccaacctgttcaagttcagcccgggcaagttgcaccattacaaccaatgctgaccgggcaacccacaggaatgcagtttcagcaagggtttggggatcagcttggggctcaacaaacacaacccttgcacacacaatatggtggaatgtatcctacaatgcaaggtaaccaatcagctggcatgtatccccagcagatggctggagatttctaccagcaacagatgtatggtggtcagatggctggttatggatacggtcagcagtctggaggatactatgctccaaacgctgcgtatgggtatggcggtgcaaacgagctttctcagggaatgaatggccttgcagtgcaagataacagtttgtatggaacttctgcatcctcttccttccagcagccaatgaggccatccagacccgaggattccctctttggtgatcttgttagcattgctaaaacaaagcctagcaaaactgcagctaataaggctggtggcttgtaa</cdnaseq>|
 
−
AA = <aaseq>MPQSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSI                    KKRIGHKNSKIQLLALTLLETLIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEK                    ILILIDTWQEAFGGSRARYPQYYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNL                    PPALRNTERQQEAPESSSTPEVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQE                    VIVDLVDQCRSYKQRVVQLVNSTTDEELLSQGLSLNDDLQRVLAKHDAIAAGIAVRVE                    KPKSVQARGDKSPSIKPEGAKQPDQRSSEAASTVTPFEQLALPAPASSSSSKPPVEPA                    VGPSIDLLSGDDYFKPEPVNSQALVSVGNPPAASANNTLDLVDMFAQSNVGNNPNPAV                    TSSMLNSNPSLSEPQLYPSQQTVPPQQPSPYSNGLTSNTMAPYDQPSDINATGSWNSQ                    FAHGMLPPQLPPQLPPQQPPNYGQGQDQSGDLPPPPWETQPAESDQFQPGQPRGLAMP                    SGQIGGIQSQPVQVQPGQVAPLQPMLTGQPTGMQFQQGFGDQLGAQQTQPLHTQYGGM                    YPTMQGNQSAGMYPQQMAGDFYQQQMYGGQMAGYGYGQQSGGYYAPNAAYGYGGANEL                    SQGMNGLAVQDNSLYGTSASSSFQQPMRPSRPEDSLFGDLVSIAKTKPSKTAANKAGG                    L</aaseq>|
 
−
DNA = <dnaseqindica>142..245#1281..1359#2813..2911#2983..3096#3373..3533#4025..4106#4251..4336#5842..6021#6192..6703#7123..7757#cctcctcccttcccttcccttcctctcgccgaaccaacgcggaagaaggagctcgcccgccggctagggtttgccgcacacccgccgccgagcagctagcaccggagtgttgggaggggaggctcgcccgccgccgccgccatgccgcagtcggtgctcgtcgaccgcgcgacgagcgagtcgctcatcgggcccgactggtccctcaacctcgagatctgcgacatcctcaaccacgacccctcgtgagcgtctcctcctcccctcctctcttcagtttccgcgtataattttttggttgagcggccgccgcgctggtgggcggcggcgggggtgcgagttggtcggtcgcgcggcccattgcttgggcgggtggttccccgcgccgcgaattttagtgcttgctggtcttgcagtcgtttctactgtagtttgttgtgggaaataatggaatggtagtgggtggctgactggctgcgatgtactggttttcgctgccggggaattgaaagttgaggtttcagacaaagatggtgtggctcgatgcgcgtgcgagcaatggggggatttttgggctagtaattgagggatttttttttttgcaatgatggggaaagggggaaagtgaagcgggcagctttctaccctcgctatatcactattataggttgtgtgtatttagtgagttggtcatctttctgctctcgcggtaccactagtataggtgatatttgggttccatggatggactgatggcgaatttcctaccttgcaaatatgacactttacacccttaaacaggtcaggtggtataatctgtcatcaaaaaataaattaagttacagtgagtcagttactaacactcttaacaaccattgtaaaacgagaagaaaaatgaatgtgaaatttcagtggttgtaaagtttaagtcacaggtaagggataatagctgggagaggttatttaagatttgtgcagacttgccatttgtttcctttgatatcatacaattggtactcttgacctgctggtgaattttgcacttaagtttattcttcaggaactaatatacaatgagtaaacgtgttgattttctctctagcaccgccaaaggtgttagacgaatcatgatgttatctgcttccatctttattgtgcttttattttaattggtgtgttgctcttctttttgttagattgcttcctgataacattcttcaattatatcgtatggtgttgtcacttctagtatatttactcatacttcaatattcacgtagccaagccaaagatgtagtgaagtctatcaagaaacgcattgggcacaagaactcaaagatccagcttctcgcactaacagtaagtgtcattctgtatatttggtttttcattgaataaacgtgaaccatcaattgtcaatttgccattgacataggataggatcctgcattgtggtgttcccgcacataatgatagcgccagatggtattaaagttttatcattacatggtgtgatttgatctattacataatgattatacacatttcatcaaaacgacatggttctgtattggttttcagttagtttagttggctaacttaaaaatcatcattccaccacaattatgttggatccctattggctgttataatcaggtttcagtcaattctgtctcttgccagcgaccataaattggttaccaacaaaaaccagttaaatcttcgataattttgtacctacagcatttgaattgaaaattgaacatgagatggttaccaaaataaaacatataataactgtttgatgggtgttacagcagttgcttcatatgttggattgattgaatgtaaattgcttatgtacactacatgcaatggattctgtacagccacacactagcaacactgtgagcaaaggaatctgaaccattgatgtcatcaaggcacacgcacagtcaacaatgcatgcctctactccctctgtattttctgtgcgcacattcacatatacagagtccatgtttctgtaccataacataataaaatgcatagtgcatatcttgcaattttcattgattccctcatttatctgctgttattctttggcacacatataccatgtagttgtaaccagatatagcaatgtgatagattgagcaatatacagtgcagtaatgcaataatgcatattatctcttgcctagttattccataaaatctaacatatccagtttgtttttatgttaacatgggattgttacggctggtaatgattccatcttgttcccagtggccagtggtaaattgagctctggttataacagcttagacctcgttttaaatggatgaacaggccaaattatctgattagccggggtgcttaaatattactttaggaggtaccatgattagatatgccaagttgataggatggtcatggtccatcttatggaatttttttttaggaaaacagctggaggatattggggtattaagtaatgggattgtgtacatacattgcatgtccagcaggatttgcttgatcaagatatggagttgacaaggaatagtcctagaggagagcatataggaatgcaacctttttttgcccttccttataatgggcagttttactgcatttatctttttttactgtgtttatctgtcatgtcatatttttattatgaatttttggatgttttggttgctttataatttaatttaatggcttgtggaaggcttttacttgaaaatgggcacccaaataagcatgtggtgaattatggtgtttattttgtctttttttttctagttgctggagacactgattaaaaattgtggagactttgttcatatgcacgttgctgagagggatatactccatgaaatggtgaagatagctaagaaaaaggtctgctaacactgtttgatgtccttccatgctgaaagattaagatattgatttattgttttgttttctagcctgattatcatgtaaaagagaagatactaattctgatagacacttggcaagaagcttttggtggttcccgtgcaagatatccgcaatattatgtagcatatcaagagctcctggtattatttcttgtgctattcacttgctatattaactatcctattcctcactattatttttcatcttctgtaaaattccacgtcatgtaatactattcacaaaacgtaataagtacttaacagaccaagcggcatttgttccaccttttattcttactaaaagacagtaagaaaataaacagaatgctttttttttaagctgattatttggaaatatctttttgttgctatacagctgtccagaaattatcttaatttcataatttgatttgtcagcgcgctggagctgtatttcctcaaagaccagacagctctgtgccaatctatactcctccacagactcaacctctacggaatcttcctccagctctgcgtaatactgagcgtcaacaagaagcacctgaatcttcttcaacaccagaagtacctacactgaggtaaatggttttgaaagctgctttaccatgcagccatggaattaatattgttcataactaacatggaagtcgggctttatcttgtgattttaagttcaggaaaaaaactgagggttatcgtattatttgtcttttcaccttttatgctttttacttgttccctaaaagtaagtttggatgatttaaactaggactgaagcacttgtataatttcatttctattaagatcaatttgtgggagattgataggatgctacctaacaaaacacctataacattttgtatggatttacgacaaagtatggatgtataaaaagattaagatcaattgcatccctttccatagcttgacttcatttaccttcaaaaactcagagcttatcctttccgtggccttgtcaagcaactgcatgtaattccctctttaatattaaagttgccttttctaaggaaggtataaatcacattatcttgtatctactccccaccagtttgacagaaatccagaatgcacgtggtgtcatggatgttctttcagagatgttgaatgctattgatcctggcaacagagaggtaattttcctgtacattgcagttcatataatgttcagaaaggtactgcagagaaaaaagatccattccatttctagtgtaggatctttttgataaaattggatatttttgctgccaagatgctaaaatgtaatgaatacacagggtctaagacaggaggttattgtggaccttgtggatcaatgtcgttcttacaagcagagggtggtacagcttgtcaactcaaccacgtaagttccttttttatgtctttgcctttccaaccgtcatatgaattgcagggaatcaggtagtgggaaacatgacatacatatttctgacttccttgttttataataaacaaagcagaactttgctgccaagtttgttatctttcccaaattgttcaattatttgaaggccatatgatgcttcaaatcaccctgctaaagactgcccattgattttctcagaatttttttttctaagtttgttatcatgcccattttcttcaattatttgaaggccatgtgatgcttcaagtttccctgctaatgctgtccatttattttctttaatccatttgtctaaatcaacttgggttcgctctttaagcattttctggaaatatcactaatcctaacaaattcctagtttgtgaatagcatgtaattgacctgttaatcctaatgtagattttagacatgtcttaaaaagcatcctattcctgatggcatttccagatcacaagtgggttttagtgtagtggatttcttccttgaatgtatgcattcctatacttggaccagtaggtcagagaatcagatataagatacagttgaacgatgattctgggggtgacccacatctcatagccaatcatgaggggaggggtggacaaaagctagttaacagagcaggaaattcttgtaaaagtaccactctacctttattttgtttcacacattggaaaaatacagcaacatgttttgaaaacctgagtaataacttcttactacacgtgcttcagttactaaccaaaatgtgatatagtgcattctgtctgatatcacccttcatttagtagtggtaccaatctaccgttcacctgttagtctcctttctgtgcacagttggttgaaaacctggtacaatattcgaaagtaaatgctaggttccttaaacttgttgggtgccatccaggagccagcaccgcacacaacatggaggccacctgtggcatgcggtctcacatgtatatgtttgacccagggtgcacaggagatacctatgcacaagaccctcaaatcagtctcactctcaccctggcagtttttaggggcttatgcatgaatacctcatccaggggtcatgtacagtgtatgtgagacctcgtgcctggcagtctccattctccacattggcatgccatgttggctcctggagggcctatgggcattttggacttctagatgtatgtcaaacaagattatgggtctaaatatgcattgtcaaagttcaggtaacctggatgacacttgaccgtaagttaaggatgactattgtattttactatgtgttcttagaactctgagaattgatgtaatacaggatacctgtggttgaattttttttttccttaaacttcttttgacgacatttttttaatcaccttttgaattgctgtctttccattggcttcataggagtatggaatggtcctcttaaattctttttgtgcgttgaactgtgacagggacgaggagctgctaagccagggtctttcattgaatgatgatttacagcgtgttcttgcaaaacacgatgcaattgctgcaggcatagcagttcgtgtagaaaaaccaaaatcagtccaggcccgaggggacaagtctccatcaatcaaaccagaaggggcaaaacagccagatcagaggtggttacttttatctcataatcaagcgttttgtttctatgagcttatgttcacttcttggaaaataattctttatctgtttagggttaagtaacctatgaaataacgcccaaataatagagtaacacatcattacttgctgacttctgtatacgttgtgtacttttcaggtcttctgaagctgccagtaccgtgactccatttgagcaattagcgcttccagcacctgcatcatccagcagttccaaacctcctgtagaaccagctgttggccctagtattgacctacttagtggtgatgactacttcaagccagaacctgttaattcccaggcccttgtttctgtaggcaatccacctgctgcttcagccaacaataccttggacctggtagacatgtttgcacaaagcaatgttggcaacaacccgaaccctgctgtcacctcttctatgttgaattcaaatcctagtctctctgagccacagctgtatccctcacagcagactgtgccaccacaacagccttctccatactctaatgggttaacttcaaatacaatggcaccgtatgatcaaccctctgacataaacgccacaggttcatggaatagtcaatttgctcatggaatgcttcctccacagcttcctccacaacttcctccacagcaaccaccaaattacggtactaacatttcttcttaatgggcatgtattagatttgtactccctccgtttcaggttataagactttctagcattgcctacattcatatagatgtttatgaatctaggcacgcatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtagcatttactgttttatttctattaactcagaaagctctagtagaggcattttgctagataaggtatttatgcactagcatttttgaagagagcacatcattattgtaaatgttcatatacaacatggtgaaacttttcattttatttttttcttgtagctttgcctttttatctttccatgtataagtggctgccattatttatggatgtgctgtgtcccttacaggtcaaggtcaagatcagagtggtgatctcccaccaccaccctgggaaactcaacctgcagaaagtgatcaattccagcctgggcaacctcgtgggctagcaatgccatcagggcaaattggaggcattcaatcccaacctgttcaagttcagcccgggcaagttgcaccattacaaccaatgctgaccgggcaacccacaggaatgcagtttcagcaagggtttggggatcagcttggggctcaacaaacacaacccttgcacacacaatatggtggaatgtatcctacaatgcaaggtaaccaatcagctggcatgtatccccagcagatggctggagatttctaccagcaacagatgtatggtggtcagatggctggttatggatacggtcagcagtctggaggatactatgctccaaacgctgcgtatgggtatggcggtgcaaacgagctttctcagggaatgaatggccttgcagtgcaagataacagtttgtatggaacttctgcatcctcttccttccagcagccaatgaggccatccagacccgaggattccctctttggtgatcttgttagcattgctaaaacaaagcctagcaaaactgcagctaataaggctggtggcttgtaaagatgagtggatgcttattaacacttgtggccgcggagatagcttttcctcatagtacataagttctttgaattatttttctctattggaaagtagtaggtgagcgttatagattctgaaattcatagcgagtgcggttcagtaaatttttctctgtcaacttgcaagcaattatagtgtgtttgcttcttgcaagctcttaatttcctgcgccatcaggagttttctgtagtctgtaaaccttggtaagaaaaaaccattgaacattctttaatgtttcctgtaaagaattgatatcgtcaagtattatactggtagctacaatcttgttcacag</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064079.1 RefSeq:Os06g0332400]|
 
−
}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 6]]
 
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[[Category:Chromosome 6]]
 

Latest revision as of 08:54, 14 May 2015

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Structured Information