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| − | Please input one-sentence summary here.
| + | The rice '''''Os07g0152900''''' was reported as '''''OsGLO4''''' in 2013 <ref name="ref1" /> by researchers from China. |
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| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | [[File:Os07g0152900.png|right|thumb|327px|'''Figure 1.''' ''Phenotypes of the GLO-suppressed transgenic plants.<ref name="ref1" />.'']] |
| | + | *'''''Os07g0152900''''' '''<=>''' '''''OsGLO4,GLO4''''' |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * Glycolate oxidase (GLO) encoded by '''''OsGLO4''''' is a key enzyme for photorespiration in plants. |
| − | | + | * suppression of '''''GLO''''' genes causes photosynthetic inhibition, and the accumulated glycolate with the deactivated Rubisco is likely involved in the regulation. |
| − | ===Expression=== | + | ===Phenotypic analysis=== |
| − | Please input expression information here.
| + | * The researchers have generated the transgenic rice (Oryza sativa) plants with GLO being constitutively silenced, and conducted the physiological and biochemical analyses on these plants to explore the regulatory mechanism. |
| | + | * When '''''GLO''''' was downregulated, the net photosynthetic rate (Pn) was reduced and the plant growth was correspondingly stunted. Surprisingly, glyoxylate, as a product of the GLO catalysis, was accumulated in response to the GLO suppression, like its substrate glycolate. |
| | + | * Furthermore, the glyoxylate content was found to be inversely proportional to the Pn while the Pn is directly proportional to the Rubisco activation state in the GLO-suppressed plants. |
| | | | |
| − | ===Evolution===
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| − | Please input evolution information here.
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
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| | ==Labs working on this gene== | | ==Labs working on this gene== |
| − | Please input related labs here.
| + | * State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, South China Agricultural University, Guangzhou, China |
| − | | + | * Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China |
| | + | * Institute of Biotechnology, Cornell University, Ithaca, NY, USA |
| | ==References== | | ==References== |
| − | Please input cited references here.
| + | <references> |
| | + | * <ref name="ref1"> |
| | + | Lu Y, Li Y, Yang Q, Zhang Z, Chen Y, Zhang S, Peng XX. Suppression of |
| | + | glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis |
| | + | through deactivating Rubisco in rice. Physiol Plant. 2014 Mar;150(3):463-76. doi: |
| | + | 10.1111/ppl.12104. Epub 2013 Oct 12. PubMed PMID: 24102419 |
| | + | </ref> |
| | + | </references> |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]] |
| − | GeneName = Os07g0152900|
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| − | Description = Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment)|
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| − | Version = NM_001065444.1 GI:115470620 GeneID:4342420|
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| − | Length = 3632 bp|
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| − | Definition = Oryza sativa Japonica Group Os07g0152900, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
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| − | AP = Chromosome 7:2829843..2833474|
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| − | CDS = 2830475..2830614,2831180..2831304,2831510..2831556,2831672..2831749,2831838..2831962<br>,2832116..2832182,2832266..2832328,2832488..2832557,2832642..2832742<br>,2832837..2832941,2833023..2833211|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008400:2829843..2833474
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| − | source=RiceChromosome07
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008400:2829843..2833474
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| − | source=RiceChromosome07
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgggggagatcaccaatgtcacggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactatgcatctggggccgaggacgagtggactctccaggagaacagggaggccttcgccaggatcctgtttcgcccacgcatactgatcgacgtatccaagattgacatggccacaacagtcctggggttcaagatttcaatgcccattatgattgctccctctgccatgcagaagatggctcacccagatggagagtatgcaactgcgcgtgctgcatcagcagcgggcactataatgacattgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtttcttccagctttatgtttacaaagacaggagggtggtggagcagcttgttaggagagctgaaagggctggattcaaggcgattgcgcttacggtggatactccgcgacttggccgtagggaggctgacatcaagaacaggtttgttctgccaccatttttgacactgaagaactttgaaggcctggagctggggaaaatggaccaggctagcgattcaggactggcttcttacgtcgccgggcaaatcgatcgcaccctgagctggaaggatgtgaagtggctgcagaccatcaccacgctgccgatcctggtgaagggagtgatcactgcagaagacacgaggctcgccgtggagaacggcgcggccggcatcatcgtgtccaaccacggcgcccgccagctggactacgtcccggccaccatcagcgccctcgaggaggttgtgaaggcggctcgcgggcagctccccgtcttcctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcatcgggaggccggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgctccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaaccacgtcatcaccgaggccgacaagctcggcgtcatgccgtctcgcttgtaa</cdnaseq>|
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| − | AA = <aaseq>MGEITNVTEYQAIAKQKLPKMIYDYYASGAEDEWTLQENREAFA RILFRPRILIDVSKIDMATTVLGFKISMPIMIAPSAMQKMAHPDGEYATARAASAAGT IMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRRVVEQLVRRAERAGFKAIALTVDTP RLGRREADIKNRFVLPPFLTLKNFEGLELGKMDQASDSGLASYVAGQIDRTLSWKDVK WLQTITTLPILVKGVITAEDTRLAVENGAAGIIVSNHGARQLDYVPATISALEEVVKA ARGQLPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAAGEAGVRNVLQMLRDE FELTMALSGCTSLADITRNHVITEADKLGVMPSRL</aaseq>|
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| − | DNA = <dnaseqindica>633..772#1338..1462#1668..1714#1830..1907#1996..2120#2274..2340#2424..2486#2646..2715#2800..2900#2995..3099#3181..3369#aagtgaattttcttttctggggctggaagagcaggaatggaggtgcaggagaggatgaggaagcagtgtaggagagccatcctctctgcacacctccaatagctcatccaaacaacagctatctcactctccctccatgtctctacactctagcaattcaacaattattttcctttgttttgtcttcatctacaaatgcttggtcatcaccctcatctcttatattactctcacttccaccacaccctccatttcttgcttccatttgtcttgcttggctcttcactctccccctgttcctgcaggggtcaggcactgcctgctacaaggtaaaaaactcactggagattaagaacaattattaatttcattcttgattcagtacatggtccaatttacatgctctattgaattgatggtgtcttaatttggaaaacattttgcatggatggatttcaacaagtgttctgatgatgaaagcctgactgttctttactttcttcagacaaagaatccacttgcatgtagtagagggatttgaagttattcttatgttttcttggttaaatcaagcagctgttttcttgtttggtccagagtggtgtaggtgattcggctagctcagcgcgaagatgggggagatcaccaatgtcacggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactatgcatctggggccgaggacgagtggactctccaggagaacagggaggccttcgccaggatcctgtaagtattcaatgttcttttttgctatgttacagctcctgccactgttacacttttgtgcatggttttttcttgtgggagtgtatgtgagaagtgtaaaatagctgggccttaagtattgtttggtaatcagcctttaatacacattttttgggtaaattttacttccctaatccttttggggtaaatttttagtggttatttgtgagcaataacatgtttgttgatgcagttttggttctatgcttggtataaataattgttctcttattatactgaattttctattgtatttgattcacctaacataacattatcgaaaaaattaaaaaaaaaagccagcatgttcatcgttcttcgacaactttcatttgtcatagttgatcctgaaaatccattctcataccataccataactaaatgtttcatgttgctagatactgaagaacagatgtggttttcctgtttatgtacagttggttgctcaaataatttatcagtacaaatttttgcagcttcatcattagttcattacccatctcctcatatgttctgttttggccaggtttcgcccacgcatactgatcgacgtatccaagattgacatggccacaacagtcctggggttcaagatttcaatgcccattatgattgctccctctgccatgcagaagatggctcacccagatggtatgcttttgtgagattttcatttggttttgcttaatcatgttagagtaatagagctatatgtctaacacaaaaggatatcatgttagagtaatccataaataactgaagctgctgaacttttcaaagcaacatgtaaattctttctgctttgcctaccatgtacaatagagctaatattggtccaatctttatattgattcaggagagtatgcaactgcgcgtgctgcatcagcagcgggcactataatggttggtcgatgttccaatggatcacaaatagaattctacttatgaaattaatcaatccagttaatgacactgaagtactgaacacaaccttgtgccctttttttttaatcttcagacattgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtttcttccagctttatgtaaacacactacacaatctctgctaatactattagtttcttcgtttgattgtccttatcaaggatcatgtaccttggatctctgtaggtttacaaagacaggagggtggtggagcagcttgttaggagagctgaaagggctggattcaaggcgattgcgcttacggtggatactccgcgacttggccgtagggaggctgacatcaagaacaggtgccctccatcttttccatggactgaacacaccagttatatcttctgcattacaaaaatgagcatgggaagcatacactgaaatgagcaaacataagatcccacatgtatcaggatttgaaacaagcagcctgtctgtggatgttgttgcaggtttgttctgccaccatttttgacactgaagaactttgaaggcctggagctggggaaaatggaccaggtgaaactcatctctcagcacacatcgtggacaccatgttcctctaatctctcatggaactaatctcccattctgatgatcaggctagcgattcaggactggcttcttacgtcgccgggcaaatcgatcgcaccctgagctggaaggtagcatcacgccattgccagtcctgtttatctgcttctctgatcgaatttactgacatgaagatgacaatagctgcttgattacttgttcatcactgtgatcaactgatgaatcatatatcaaatgttaaacaatgatgtgaattatattttgtgcaggatgtgaagtggctgcagaccatcaccacgctgccgatcctggtgaagggagtgatcactgcagaagacagtaaagccattgcctcatctctacattacatgctccgatcattaactcgaatgcaaagccactgacagtgtgatcgaattgcagcgaggctcgccgtggagaacggcgcggccggcatcatcgtgtccaaccacggcgcccgccagctggactacgtcccggccaccatcagcgccctcgaggaggtactcgatcatcttcaacctcgcatcgatggtttctgcagattcgatcagtacagtacagtgatcgatctctttggttttcggcggtgtgcaggttgtgaaggcggctcgcgggcagctccccgtcttcctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcgtgagtacaccggcgaactagcaaatccatcaatgattgcgagaggtgaattctcaactggtcgatttcgtgttcttgcagatcgggaggccggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgctccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaaccacgtcatcaccgaggccgacaagctcggcgtcatgccgtctcgcttgtaaacaacaacgacggcgaacttgtcgccgtcgatcgatcaccggccggccgccgcgacacgctttgccggccgacggatgatcggccgggaatgaagaagaaggtagtagctgccgaagaaaagattggaagatgcaaagttctataattttggatgatgctgcgtcatgtacttttgttaattgtcgagtgattgatcacctgtacctaattaaatggtttattggattattggcggtttatactaaacgaacaaattaatacc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001065444.1 RefSeq:Os07g0152900]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 7]]
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| − | [[Category:Chromosome 7]]
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