Difference between revisions of "Os05g0398100"

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(Created page with "{{JaponicaGene| GeneName = Os05g0398100| Description = Armadillo-like helical domain containing protein| Version = NM_001062007.1 GI:115463744 GeneID:4338712| Length = 840...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os05g0398100|
 
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Description = Armadillo-like helical domain containing protein|
 
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Version = NM_001062007.1 GI:115463744 GeneID:4338712|
 
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Length = 8401 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0398100, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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Please input expression information here.
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AP = Chromosome 5:19375959..19384359|
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CDS = 19375959..19376049,19376153..19376277,19376351..19376468,19376612..19376676,19376818..19376897<br>,19377000..19377063,19378399..19378538,19378629..19378752,19378839..19378898<br>,19378980..19379048,19379197..19379346,19380240..19380347,19380631..19380706<br>,19381018..19381112,19382787..19382861,19382981..19383101,19383194..19383366<br>,19383705..19383871,19384002..19384359|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008398:19375959..19384359
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source=RiceChromosome05
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008398:19375959..19384359
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source=RiceChromosome05
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggaggcggagcagcagcagcagccgccgcatcgcccgcgccgcaaggggcagaagaggaagttggaggacgaggccgcggcctccgcctcggccgcggcggcggcggcggcggccgccgccgccgccgccaccgcaaccccgtcgtcgctcgggagcgccggcgcagacgacgacaacgaggaggaggaggacggctcggccgggccggagatctgctgccgccactcccaggcggcgctggcccgcgaggtccgcacgcaggtcgacgccctccaccggtgcttctcctggcgccacgccgaccgcgccgccgccaagcgcgccacccacgtcctcgccgagctcgccaaaaacgaggaggttgtgaacgtgatcgtagagggcggcgccgtgcccgccctggtgtgccacctgaaggagccgcccgcggtggcggtgttgcaggaggagcagcagcctcggccgttcgagcacgaggtcgagaagggggctgccttcgctctcggcctcctagcagtaaagcctgaacatcaacaacttatagttgacgccggtgccttaccactgctggtgaatcttctaaaaaggcacaaaaatgctacaaacttgcgggcagttaacagtgttatcaggagagcagctgatgcaatcaccaatctagctcatgaaaatagcaacatcaaaacttgtgtcagaattgaaggcggaattccacctcttgttgaattgctagaatcacaggatctcaaggtgcagagagcagctgcaggggccttgcggacgctggctttcaaaaacgatgaaaacaaaagtcagattgttgattgcaatgcgttgccaactttgatattaatgcttcgatcagaggatgctgcgattcactacgaagcagttggtgtcattggaaacttggttcattcatccccaaatatcaagaaagaggttctcaatgcaggggccctgcaacctgtaattgggttattaagttcctgttgtacggagagtcaaagagaggctgctttgttgctagggcagtttgcttcggctgattctgattgcaaggtccatattgtgcaaagaggtgcagtccgtccgctgattgaaatgctacagtcagctgatgtccaacttagagaaatgtctgcttttgcccttgggaggcttgcccagagaagttcatttgtttcccaggacacacataaccaagcaggcattgcatataatggtggtttggtgcctctactaaagcttctagactcaaaaaatggatctctgcaacataatgctgcatttgccctttacggagttgctgacaacgaggactatgtgtccgacttcattaaagttggaggtgtacaaaagttgcaagatggagaatttatcgtgcaggccacaaaggattgtgtagctaagacccttaagaggttagaggagaagataaatggacgagtgttaaaacacttgctttatatgatgagagtaggagaaaaatctgtgcagaggcgggttgctctggccctggcacacctctgtgcgcctgaagatcaaagaacaatttttattgataataatggccttgagttgcttcttgatcttctggtttcggtgagcctgaagcatcagctagatggttcagtagcactatacaaattggccaacaaagctgcagcactttctcccatggatgctgcacctccatctccaacaccacaggtttatcttggtgagcaatatgtgaacagttcgacactttcagatgttaccttcttggtggaaggaaagcgcttttatgcacatagaattgcattacttgcttcttcggatgcatttcgtgcaatgtttgatggcggatatagggaaaaggacgcgagagacatagaaattccaaatatcagatggaatgtgtttgaactcatgatgagatttatctatacaggttcagtggaagtaactagcgatatctctcaggatcttcttagagctgctgatcagtatctattagaaggcctcaaacgtctgtgtgaatatacaattgcgcaggatgtgaatgtagacaacgtttctgacatgtatgacctatctgaagcttttcatgcaatgtcactcagacatacatgtgtcctatttatcttggagcagtttgaaaagatttgcgtcaaatctgggtcaagccagctgatccagcgtgtcatcccagagctccgcaacttcttcgctaaggcgctaaggccaagccacaggaatgcgcagccatga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MEAEQQQQPPHRPRRKGQKRKLEDEAAASASAAAAAAAAAAAAA                    TATPSSLGSAGADDDNEEEEDGSAGPEICCRHSQAALAREVRTQVDALHRCFSWRHAD                    RAAAKRATHVLAELAKNEEVVNVIVEGGAVPALVCHLKEPPAVAVLQEEQQPRPFEHE                    VEKGAAFALGLLAVKPEHQQLIVDAGALPLLVNLLKRHKNATNLRAVNSVIRRAADAI                    TNLAHENSNIKTCVRIEGGIPPLVELLESQDLKVQRAAAGALRTLAFKNDENKSQIVD                    CNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLNAGALQPVIGLLSSCCT                    ESQREAALLLGQFASADSDCKVHIVQRGAVRPLIEMLQSADVQLREMSAFALGRLAQR                    SSFVSQDTHNQAGIAYNGGLVPLLKLLDSKNGSLQHNAAFALYGVADNEDYVSDFIKV                    GGVQKLQDGEFIVQATKDCVAKTLKRLEEKINGRVLKHLLYMMRVGEKSVQRRVALAL                    AHLCAPEDQRTIFIDNNGLELLLDLLVSVSLKHQLDGSVALYKLANKAAALSPMDAAP                    PSPTPQVYLGEQYVNSSTLSDVTFLVEGKRFYAHRIALLASSDAFRAMFDGGYREKDA                    RDIEIPNIRWNVFELMMRFIYTGSVEVTSDISQDLLRAADQYLLEGLKRLCEYTIAQD                    VNVDNVSDMYDLSEAFHAMSLRHTCVLFILEQFEKICVKSGSSQLIQRVIPELRNFFA                    KALRPSHRNAQP</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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DNA = <dnaseqindica>8311..8401#8083..8207#7892..8009#7684..7748#7463..7542#7297..7360#5822..5961#5608..5731#5462..5521#5312..5380#5014..5163#4013..4120#3654..3729#3248..3342#1499..1573#1259..1379#994..1166#489..655#1..358#atggaggcggagcagcagcagcagccgccgcatcgcccgcgccgcaaggggcagaagaggaagttggaggacgaggccgcggcctccgcctcggccgcggcggcggcggcggcggccgccgccgccgccgccaccgcaaccccgtcgtcgctcgggagcgccggcgcagacgacgacaacgaggaggaggaggacggctcggccgggccggagatctgctgccgccactcccaggcggcgctggcccgcgaggtccgcacgcaggtcgacgccctccaccggtgcttctcctggcgccacgccgaccgcgccgccgccaagcgcgccacccacgtcctcgccgagctcgccaaaaacggtaaacgctccccccaccaccccgaaccctcgccgcaccgcaccgcgccgcgccgatccgtggttttccgcgccaggcttccgggcccgttcagctgaggcggatctggatgttgtgtttttcttcgcagaggaggttgtgaacgtgatcgtagagggcggcgccgtgcccgccctggtgtgccacctgaaggagccgcccgcggtggcggtgttgcaggaggagcagcagcctcggccgttcgagcacgaggtcgagaagggggctgccttcgctctcggcctcctagcagtaaaggttccctgttcgtgccgtactagtttttattcccatttcattgcaattattggtatttctttctcacctgagttatccaaatgtatcattccataataaaattaagagtagctttggatatgccatcgtctgccaaaatttaacccgagaacaactactgaacaagatagtaacacctaggaattcgtttagtagtttttatgtatacatgttccctatctccctttaagcgattcatggaaactggtgtttttgagcatgacctcagtaatatgtttttgatctaagttacttttgagaaatttagtcattaattacttaatgtgtttgcataacagcctgaacatcaacaacttatagttgacgccggtgccttaccactgctggtgaatcttctaaaaaggcacaaaaatgctacaaacttgcgggcagttaacagtgttatcaggagagcagctgatgcaatcaccaatctagctcatgaaaatagcaacatcaaaacttgtgtcaggtgttttttctatattttgttgatagtctgatgctccttcaactagggaactttttattgcttaatgatgtttttatattggtttactgcagaattgaaggcggaattccacctcttgttgaattgctagaatcacaggatctcaaggtgcagagagcagctgcaggggccttgcggacgctggctttcaaaaacgatgaaaacaaaagtcaggtgagatatcaaaatttcaaaataacgaggccaacattatgatatattttaacaccataatggtgcagttacatccatatttactcatactattttgtgtaattttccccttaatgcagattgttgattgcaatgcgttgccaactttgatattaatgcttcgatcagaggatgctgcgattcactacgaagcagtaagacactaggaatttattttttgtgaattatgaaccacacttctctgggaactcttttatgttaaggttgatgctgactgatatgcattgattgattatgcggttagtgttgcaaattttctagttatcagcaatcttgagcagcagttatcctaatgtgttctagaacataaatttcgaagtgctcatccttcatggccagggccacaaaaatcactttgtgttctcccagaacaagcaaaccctgttttcttgtttactgcaacaatttttatttaaagttctttttgttgaattcgattcaggttttctactatatcggcctccaaacaacatatggcaacaaataacaacaaaatcaatcaactactccaaaataacataggggaactggcagctacagtgctactacagtcatggggaatttgtaacaagcgtgtgaccattattttgaaccctctctacaacttaacattgaatatagaactacgggtaatgtgttacatagagaaccatggactactaaacttgattgcttgaaatgaacctagtgcgctaacatattaaagagtataaacttgcatgacttggacaaagcataaacaagcatgctgaaaagtgaaaacttagcatgaaattggtcaaccgagccaattaggtccatccgcaggtttaatgaaggtaaaaatgtcatgttaggctgttggaccgataaaacaaatttaatacagaggtattgatgcttaagatccatatcatagttaatcatgtcagttttctacttttctggcacttgactggaggatgggcatatctaactaactggttctgtaagcaatttgaggggacctgccaatctaaaattgaaattcaagagcttttgttacagagatcaacaaatttgatggcctattgacctattccaccgttttagaattattagtagccaaatacccgtgcacagtaacgatttagaataatttaccagaaattctaaacttgaaaaaaaaatcagttgaacatcaatctccaaataattcgatcacaaaccacatgtgcaaataatataattatcgagggaatattcttcaaccagtaaaaacatatatgtatgtatctatgcagagcacccacccgttgtactggtgtgggatggcagagccaccaccactactaccatcattagcttcttttgtaatagtagagataagcatggtgaaaaaacatcaattactgcaaacagcctaacaatgctagttatacacttcattgtcttacatagtaacttgatcctgtgatatccacatagaacaagtaaatcgcatgattatggtcttgacactgactcttctccatcaagtatttctatcagtactatgtatattcatatagttatacacttcattgtcttacataggagtaacttgatcctgtgatatccacatagaacaagtaaattgcatgattatggtctcgacacttcctctactcttctccatcaagtatttctatcagtattatgtatattcatatcattttggcttttttgcaccttgcaaggcttcctgtctgtatgaagtcttctattgatacaacaagcaagttattgaactacacttatgtactatctttttataatgcatgccaataagtactctgttcacatgtcaggttggtgtcattggaaacttggttcattcatccccaaatatcaagaaagaggttctcaatgcaggggccctgcaacctgtaattgggttattaaggtatgatcgtcatatgcagtttaggatcatatttttaaactatctttgaaaataattgaatgcattagaaatattttatgtatttgttgaaccctattgctgatgactcaaatgtaatatatttttttagctcagcatgagaacttttaacatttccaattactatggtagtaactgcttgcttcatggtacactccatacaattactttgaattgtacgcatgtttctgaatgatagttagcttacacctttactgctttaaattgagaatattaagttggctattatcttatggctgttcattttgcagttcctgttgtacggagagtcaaagagaggctgctttgttgctagggcagtttgcttcggctgattctgattgcaaggtacttgcttgttcttcgttcatttttagctggcttgtttctaattcttttctgatgagttaatgcagtggaggagcaaaaaacaagcttaaataagtttcccttgatataatattctggtgtgaaagagatgactgttctgttatgttttgctacttgctaaatattttatgtgcacaatagaaggtttaagcatggaattctagaatatatgaatgaaaagaagctgatgttttcttaccttttcgttgtttaacatcctgtgcatgtgtattccctacaggtccatattgtgcaaagaggtgcagtccgtccgctgattgaaatgctacagtcagctgatgtccaacttagagaaatgtctgcttttgcccttgggaggcttgcccaggtttgttagcttgttttactgtgtgtagtttagggacaaaacactgaaaaagaacaacactgacatgccacttagtaactttgctcctcttaattctaacaatggcagctgtatgttaggacacaattataacaataattttgaagaaattataatgagtcttcactcttgaatgaatagatataggctccttaccgtgtgttcttttgttattcgtcggcacagtagtgacttaacaacagtttaggtataatatatctgaatagctaaagtatcccagctcattctccatacaggcaaacttttcatactaacttttgagcacctgagagtcgtgcctttcaaatgttcattgcgcagagtatccactatcctgtgaagagtaacactggatattttctagacctgaatctgtgcatgtgggaatggtcctatagtgagggcaagatcccatttggtcattggctgattcttgcatagtgatgacttgaagtcacccatgcaaatacatctgtagaaccgagagaataatttctgtcacttgattatttgattatatttatgcaagggacaatccacatgcaatcatactaacatcttagaatggtgatactaacatattttggtctttgtaagccaaaagctctgcatatacccagatatcgcttcatgcgtaatgcaccagttgaaacatgtcaaaatgatcatcgatataacatgttggatatattattcttttgcctatcaattctactttgctctcagcagagcacattctgtatgttagtgatgaagtcagatatctgagacacagacctagttattttcttctcaaaaccctaggctgtaaagatattaaagaacttctataacatgcaccggtcaattcacagagaagttcatttgtttcccaggacacacataaccaagcaggcattgcatataatggtggtttggtgcctctactaaagcttctagactcaaaaaatggatctctgcaacataatgctgcatttgccctttacggagttgctgacaacgaggtaaataatgattattcaagcaaatggtaacccatttgtggatagcttgttttccactagtaggctaatgattcgatttcggaaaaggaaacgatctcttactttattttttttttcaaaataaatgactatactcttcttattgtaggactatgtgtccgacttcattaaagttggaggtgtacaaaagttgcaagatggagaatttatcgtgcaggtatgccagccatcatattattgttggattactttcaatgtaacttgcaagtgagtttaattacgtaattttaaatttcaggccacaaaggattgtgtagctaagacccttaagaggttagaggagaagataaatggacgagtaagctgtgctcagtgcccaccagattttgcttttccatcgccacattctagcatttagcttattttgttcctgtatgaccgcaggtgttaaaacacttgctttatatgatgagagtaggagaaaaatctgtgcagaggcgggttgctctggccctggcacacctctgtgcgcctgaagatcaaagaacaatttttattgataataatggtatgagcaattttaaatgcaccaaaatgtgctcctttgtattacttttgtgtaatgtttaccattgattaagttattaaattaattcaggccttgagttgcttcttgatcttctggtttcggtgagcctgaagcatcagctagatggttcagtagcactatacaaattggccaacaaagctgcagcactttctcccatggatgctgcacctccatctccaacaccacaggtagagaattggttcttaattcaacccaacctttccttgtttatgccaaaggctttatgagttgattgtggtgtgctatgtaaaaggttttcaatgtgatatggactgaactacgatgtggtaatgcccatgcattgattttattttgtataatcaatgcattaaaagggtttttttgttagaaataaacaaaacagtacatgtttaggggaaatttgtgtaatgcaacaaaactagctaattgttggctgacaatcttgtttgattagtattttgacaggaaattggaggtggatgtataatagctgtaaataaatatgcaacacagattcttggcttcttggttgtgcgaattatgtgatagctgcggaaaattgttgcaaaatattaactaaaggaacaatcctgtacattcatcgccaatatttcattaagaagcttagggttactaggatgtgaatattaatagctaagtttaatgctagttttaagttgaaaaaagaaacattagtttacataacttataacatactgtaacatttcagttgaaccacccaacagtttttcaaacttgtactatcttaagttaattttggagcagtctatgataatagttttttaagacctatgtgttatttgactcgtcagtagcggtaacattgcctttaatcatgttcttgttgccttacctcgaaatttcaaagtttttatcatgatattggtggtacaactgttgccatgaaattctagaagtatgattgactgatattccccatggctcatgtaaactaaataatagaaacatctgtcataaatactgatataaatggtgcttcatctcgcaaattgcacaacagcctcgtcacactttcacacttatttatatacgtttcatcctagtcaacactatgcatgatttcccattcatgtcttttaagatgtgtgaccttcaggccatctgctttctgagcaaaccaagcatttatttcctttgttaggcttttgtaggacaaaacttttaggaactttgtcagacatgaccaagttgttgcaagatttgaattcactcaggcagtatgtatgcatctgtgcatttctatggattatttttatcctcagccttcagagcatagcgcacatagaattcagatatactgccatctgaatttatatgccggatagtctgttcctaattagcagtcagtcctattaataaggtgttatctcagtaaaacctagtttgtgcaatgctggattcgaatatatcatttggagcaattggtccatcaacagtgctggcaatccctgatacttaatgtattttcttcattgtaggtttatcttggtgagcaatatgtgaacagttcgacactttcagatgttaccttcttggtggaaggttggtattttatctgtggacccagttgtcaccagaaagtcactttagatacttcgatcttttccatagaatccatgtaaatcatattcctgttgtctccaggaaagcgcttttatgcacatagaattgcattacttgcttcttcggatgcatttcgtgcaatgtttgatggcggatatagggtgagtcttgtgtagcatttcttttttcgtttggtacatgtggatttgtttcttagtggaacaattcttgttgaggtatattttttcattttttaaagaacctcaatgtgtcttgactcgaatactatttttcttaaccaggaaaaggacgcgagagacatagaaattccaaatatcagatggaatgtgtttgaactcatgatgaggtaagtcagctttgagttctcttcctccttggccatggacgctttgcttctgtgcacatatctgtaattgttattattcttttctggtttgtgggcaaatgcctgctaaactagagtctgaatatcctatttggtatatgcagatttatctatacaggttcagtggaagtaactagcgatatctctcaggatcttcttagagctgctgatcagtatctattagaaggcctcaaacgtctgtgtgaatatacaattgcgcaggtaattaggattgttacctgtatgctatgctcaaaatgctggcttggtcttatttaatatatctgccttgcaggatgtgaatgtagacaacgtttctgacatgtatgacctatctgaagcttttcatgcaatgtcactcagacatacatgtgtcctatttatcttggagcagtttgaaaagatttgcgtcaaatctgggtacacttcctcacctagtgtcctgttcctaggtccaaatgtttgtgttatgtaactcattttaggtaacagaaatcatttgccatgccattttgcaatgcaggtcaagccagctgatccagcgtgtcatcccagagctccgcaacttcttcgctaaggcgctaaggccaagccacaggaatgcgcagccatga</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062007.1 RefSeq:Os05g0398100]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 08:28, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information