Difference between revisions of "Os05g0428100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0428100| Description = Glycoside hydrolase, family 35 protein| Version = NM_001187506.1 GI:297724142 GeneID:9270707| Length = 8569 bp| Def...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os05g0428100|
 
−
Description = Glycoside hydrolase, family 35 protein|
 
−
Version = NM_001187506.1 GI:297724142 GeneID:9270707|
 
−
Length = 8569 bp|
 
−
Definition = Oryza sativa Japonica Group Os05g0428100, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
+
Please input expression information here.
−
AP = Chromosome 5:20996546..21005114|
+
 
−
CDS = 20996546..20996656,20996753..20997062,20997153..20997298,20997375..20997482,20997564..20997671<br>,20998053..20998165,20998396..20998493,20998586..20998770,20998867..20999009<br>,20999349..20999433,20999542..20999680,20999742..20999836,20999950..21000093<br>,21000170..21000262,21000366..21000432,21000585..21000697,21000806..21000901<br>,21004941..21005114|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008398:20996546..21005114
+
 
−
source=RiceChromosome05
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008398:20996546..21005114
+
 
−
source=RiceChromosome05
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atgcggggaggcatggccatcacggcggcgctcgtcgtcgtcgcggcggcggcggagagccggtgggcggagttgggaagggagatcacgtacgatggccgggctctggtggtgagtggcgcacggaggatgttcttctccggcgacatgcactacgccaggagcacccctgagatgtggccaaaactcatagcaaaagcaaagaacggtggcctcgatgtgatacaaacctatgtcttctggaacgttcacgagcctatccagggtcagtataactttgagggaagatatgatcttgtaaaattcatcagagaaattcaagctcaagggctttatgtaagcctcaggattggtcccttcgtagaagcagaatggaagtacggagggtttccattttggctacatgatgttcccagcattaccttccgaagtgacaatgaaccctttaaacaacacatgcaaaattttgtcacaaagatagtaaccatgatgaaacatgaagggctttattacccacaaggaggccccatcatcatttctcagattgagaatgaataccagatgattgagcctgcatttggcgcaagtggaccacgttatgtccgttgggcagctgcaatggctgttggtctccaaacaggtgttccatggatgatgtgcaagcagaatgatgctccagatccagttattaatacctgtaatgggctcatttgcggagaaacatttgttggaccaaactcacctaacaagcctgcattgtggacagaaaattggacatctcggtctaacggtcaaaataactctgcattcagctaccctatatatggtaatgatacaaaattgagagctccagaagatattgcgtttgcagttgcactttttatagcaaggaagaaaggtagctttgtgagctactacatgtaccatggagggacaaactttgggaggtttgctgcttcatatgtaacaacaagctactatgatggagctcctcttgatgaatatgatttcaagtgtgtggcttttctagtaaacttcgatcagcataacacaccaaaggtagaattccgtaatatatctctggagctggcccctaagtccatcagtgttctctcagattgcagaaatgtagtttttgaaacagccaaggtaaatgctcagcatggttcaagaacagctaatgcagtacagtctctcaatgacattaataattggaaggcattcatagagccagttcctcaagacttgagcaagtctacgtacactggaaaccaactatttgaacagctcacaacaactaaagatgagacagattatctctggtacattgtcagctacaaaaatagagcaagtgatggcaaccagattgcccatctctatgtcaagtcactagcacatatattgcatgcttttgtcaacaatgaatatgtagggagtgtacacggcagtcatgatggacctcgcaatatagtgctcaacacgcacatgtctcttaaggaaggagataacaccatatcattgcttagtgtaatggttggatcaccggattctggcgcctacatggaaagaagaacatttgggattcagacagtgggtatacagcagggacaacagccaatgcatctcctcaacaacgacctatggggataccaagttggcttatttggagaaaaggatagtatctacacgcaagaaggaacaaacagtgttcgatggatggatatcaacaatttgatatatcatccgcttacttggtataagacaaccttttccacaccaccgggcaatgatgcagtgacactaaaccttactagcatgggaaagggcgaagtatgggtcaatggagagagcatcggacggtattgggtctccttcaaggctccaagtgggcagccctctcaatcactatatcacataccacgaggcttcctgacacctaaagacaatctcctcgtccttgttgaggaaatgggaggcgacccgctacagattaccgtgaatacaatgtctgtcacaacagtatgtggaaatgtcgatgagttctccgtcccccctctccagtctagaggaaaggttccaaaagtgcgaatctggtgccagggaggcaatcgtatctcatcaattgagttcgcaagttacgggaaccccgtgggagactgccgaagctttagaattggaagttgccatgcagaatcatcagaatccgtcgtaaagcagtcttgcataggcaggaggggatgttctattcccgtaatggcagccaagtttggaggtgacccgtgccccgggatccaaaaaagtcttctagttgtggcggattgcaggtga</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MRGGMAITAALVVVAAAAESRWAELGREITYDGRALVVSGARRM                    FFSGDMHYARSTPEMWPKLIAKAKNGGLDVIQTYVFWNVHEPIQGQYNFEGRYDLVKF                    IREIQAQGLYVSLRIGPFVEAEWKYGGFPFWLHDVPSITFRSDNEPFKQHMQNFVTKI                    VTMMKHEGLYYPQGGPIIISQIENEYQMIEPAFGASGPRYVRWAAAMAVGLQTGVPWM                    MCKQNDAPDPVINTCNGLICGETFVGPNSPNKPALWTENWTSRSNGQNNSAFSYPIYG                    NDTKLRAPEDIAFAVALFIARKKGSFVSYYMYHGGTNFGRFAASYVTTSYYDGAPLDE                    YDFKCVAFLVNFDQHNTPKVEFRNISLELAPKSISVLSDCRNVVFETAKVNAQHGSRT                    ANAVQSLNDINNWKAFIEPVPQDLSKSTYTGNQLFEQLTTTKDETDYLWYIVSYKNRA                    SDGNQIAHLYVKSLAHILHAFVNNEYVGSVHGSHDGPRNIVLNTHMSLKEGDNTISLL                    SVMVGSPDSGAYMERRTFGIQTVGIQQGQQPMHLLNNDLWGYQVGLFGEKDSIYTQEG                    TNSVRWMDINNLIYHPLTWYKTTFSTPPGNDAVTLNLTSMGKGEVWVNGESIGRYWVS                    FKAPSGQPSQSLYHIPRGFLTPKDNLLVLVEEMGGDPLQITVNTMSVTTVCGNVDEFS                    VPPLQSRGKVPKVRIWCQGGNRISSIEFASYGNPVGDCRSFRIGSCHAESSESVVKQS                    CIGRRGCSIPVMAAKFGGDPCPGIQKSLLVVADCR</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
−
DNA = <dnaseqindica>8459..8569#8053..8362#7817..7962#7633..7740#7444..7551#6950..7062#6622..6719#6345..6529#6106..6248#5682..5766#5435..5573#5279..5373#5022..5165#4853..4945#4683..4749#4418..4530#4214..4309#1..174#atgcggggaggcatggccatcacggcggcgctcgtcgtcgtcgcggcggcggcggagagccggtgggcggagttgggaagggagatcacgtacgatggccgggctctggtggtgagtggcgcacggaggatgttcttctccggcgacatgcactacgccaggagcacccctgaggtagctgcatttcatctgctttgatgccaatctgctgacagcattagctcccggttttcatttaattaattaacgttcaaggtggtcgtgtagctaagtacttcctccatttcaggttacaatcttgattttagccaaagtcaaactgttgtaaatttaactaagtttatagataaatataataatatttataatactaaagtagtttcatcaaatcaataattgaatatatttttataataaatttatcttgggttaaaaatgttattgatttttttataaatttggtcaaaatcagtttaattttgactaaagtaaaaacgtattataacctgaaacagagggagtagtcttcgtagagttcatagatggtcgtgtagttttcagggctaaactaggttcggctgtccagtttttctttttgaagggaatttttttaaagggaaatgtcacagtttttctttgattgcgatggaggtgatggagactttatgttttcttgttttcctttttctattcttgaaaagaatatatagcttgttcacatgagcctgtcataacctactctcagtgcttattgatatggatgactgcaactactatttgttaccttatttcgtccgacctaaaataactcgattttttattatcttatttgtaccaaaataacttcttttaagcaatcatagcattggattttatagaagggagagacaaatggaatggataaaaaataaagacattttaggaaggcggtagtacatccaataactcactggcagttagtcataacatataatttaggcccagtttagttctcacccaaaattttttcaccctgtcatatcaaacgtttgtcacatcgaacgtttgaacacatgtataaagtgataaatataggctaaaaaaactaattgcacagattacaactaatttgtgagacgaatcttttaagcctatttgttccatgatttgacaatgtggtgctccagtaaatatttactaatgacggattaattagacttaataaattcatctcgcggtttactgatggattctgtaattattttttttattagtgcccgaacaccccatgcgacaccctatataatacccgatgtgatatgccaaaactttacacaccggatctaaacacccccttacatgacatgttatcatgttgtaccagtttatattcattttacaaaacactgacagtcatgtaggagtagctcctaatacaatatttaatagtggcttcaagacacacgcaaagttttgtatcactctctgggttctcaatatataggcctatacaggtgtcaggatttaggaccaaaattgttcaactgcaaatgtctccgtcatcttaatcggatttgctagtaagtttgcgcaagcttttttccttccctagcttccgaattttcagtcgtacgatgttatgtcaagattcgtgctacactagttacatataagttaaattatagttacaactagttataataattttaactcattgtaactacattacaactttatataatttaggtataaaaagttgcctatatttttatacttatatataagttatagtataattatgatggaattatattatatagttacatttgaaagttttccattttaaaaaacttgcgagaagagtccagagtctatatagaaatataatttataaataactaaaattaaaaatttaaaaaataataatggaaaaaaagtctagaatccatataggaatacaaattacaaataatagaaattttaagttagaaaataaggaatattgaaacaagagtttagagttcatataaaaatacaatttacaaataactaaaatccaaaattaagaaaaaaagaatattggaggaggagtttagagtccatatagaaataaaatttataaataacagaaattcgaaattaaaaaataggaaatagttaaagaggagtttagagtcccatatagaaataactaaaactaaaaattttaaaaagaaattgataactatcacgtatatccaatacaaatgaatattacacattggttagtttggtcaagttagtataaaatttaaaattatgttatcattttaatatagtttaacaataaaatatgaaaatatttaagctattatatgagaaaaaatataattgtactagccgtgcaatctgcgagagccaccatactagttcattatattttagccttaaaaaatggaaaatctgataattttaagggtataacgtatatccaatacaaatgaatatcacacattggttagtttggtcaagttagtacaaaatttaaaattatgttatcattttaatatagtttaacaataaaatatgaaaatatttaagctattatatgagaaaaaatataattgcactagccgtgcaatctgcgagggccaccatactagttcattatattttagccttaaaaaatggaaaatctgataattttaagggtataaatttgttagaattttaccttttccccctccatacatatacatatacatatatatatatatatatatatatatatatatatatatatatatataatgaatttaaacacgagactttatacataagtggaatattattgaaagttcacgtacaaatttttctcgaattttcaataacacttgtaaattggtgtgtataccttaaatttggcaaattttgctacgggatatttaaagtttgtgtaatttgcttatggacatcgagaaaatgtgttacggctaaaagataccctaaaaacctgttaatttgctagcggacacttctgactcaattgaaaagataaattttaagaaagacgaggatgcccctaggaccacatgcttcaaacataatgttagagtgaaaatctagaaatcatgcaactctaaattcaccatcacccaaagtaaatcactagcatacgtcgtactccatcttcactccaatctcaaaagcttttaaccctaagggtattcttgtctttttgaagaatttttctctccaattaaaccggaagtgtctttcagcaaattaccaatttttcacaatatgttttagccgtgatacagtttttagatgtctaccagcaaattacataaattctgagtgtcatgtagcaaattttaccctgaaatttatatgcacaagatacattcatcacacttgtagtgcaactaggtgctgctatagttgtcatctatattttctaagtgaatttggtgatgaaaatcgaaaggaaaagggagaattaaagagcttacaacactatacttctcaatttttaagcatgcatgaccttacagaaaacaaaagagaaacatacatgaacttgttctgaggaacgattcctaacaagttaacaaattttcctttttgcgaggaacgaagtcaataacttgaatgctacttcacccttgtgcacgtttatgtcacaactataatctgtggctttgtgccttgccttccacatatccttcgtattatctcttctattaaaagaattttttggtttataaatatatagtcccggccccttggtaagacatcaattttccacagcttgagccatcaggggaaaaatattagacctgtgatttccaaaaggtgtaatatctacgaacaaagggaatcttaaattgacgaggatgaatagatattggtttcctcttttcagataactaacagcttaatagatattggtttcctctttccagagaagtagcagttttgagacatgcatctatttcccagaattacattctagctcagcgtgttatataaagtggaaagcacaaataattacactcagcgtttgagtcatcaaaaacatgcaccctatatagcctaaaggtctggttatttgggacaattttcaagcaacaatcactatgaacttcgatagcatttccggctttccttggagcaattctctggtttgccaagctttccaattcatcacataaatcatttattaggatgtttgtgcacaataaattggcagatgtggccaaaactcatagcaaaagcaaagaacggtggcctcgatgtgatacaaacctatgtcttctggaacgttcacgagcctatccagggtcaggtattcactctttccagtctgatatgtttgtctgtcaaaagagcattgaagatattcagtaaaagaatttccataactaagatatgcttaaatgtaccattgtaacagtataactttgagggaagatatgatcttgtaaaattcatcagagaaattcaagctcaagggctttatgtaagcctcaggattggtcccttcgtagaagcagaatggaagtacgggtatgaatgaattgaaatattttcctatgcagataacaggttatcttttgagaaatgctctggtatatagaactcaaggaagcaatatgttcaaatcagagtacaagttctcatctttcataaactaccttaacaagtctttgttagtacagagggtttccattttggctacatgatgttcccagcattaccttccgaagtgacaatgaaccctttaaagtaagtgcatacaagataagattcttcaatcccataatcttaaaactgtttccattttccagtcatgtacaccgcaataagttacatgtttttatccatgcagcaacacatgcaaaattttgtcacaaagatagtaaccatgatgaaacatgaagggctttattacccacaaggaggccccatcatcatttctcaggttagaaatgttaagttgaattaatagttgcatcaagttgttttatttacatctaactacatcaattgacatgtagattgagaatgaataccagatgattgagcctgcatttggcgcaagtggaccacgttatgtccgttgggcagctgcaatggctgttggtctccaaacaggtgttccatggatgatgtgcaagcagaatgatgctccagatccagttgttagtgtcatgcttacagcaattcacatgattttccacatggctacctgaaaatattaaacatactgtctttttttttaaaagaaataaacccatgacaagttcatttttagattaatacctgtaatgggctcatttgcggagaaacatttgttggaccaaactcacctaacaagcctgcattgtggacagaaaattggacatctcggtatgttgaaatggcacttgtcctttgatttccatatatcttattgttctgatggaataaggtctaacggtcaaaataactctgcattcagctaccctatatatggtaatgatacaaaattgagagctccagaagatattgcgtttgcagttgcactttttatagcaaggaagaaaggtagctttgtgagctactacatggtatggactttagaggaaacacactgaacattttccaatgctacatttcggcagaaaaaaagtacaaccttcaaatgtttcattgttgatgacgaatttatgatgcagtaccatggagggacaaactttgggaggtttgctgcttcatatgtaacaacaagctactatgatggagctcctcttgatgaatatggtaaatcctttttatgcaaaacaaatcatgctaaatacatttaccaatatactaacagttaacaataattatattttccccacgaaagaatattatattttaactttcttgtttcttaaggtctaatatggcaacctacatggggtcatcttagagaattgcattgtgcagtaaagcaatcatcagaaccattactatttgggagctactccaatttttcattaggccaacaacaagaggtgaaattactgaaagaactatggttcttattttttaataaagttccacaagacaagcacataatttaggatgtactctaggcacatgtttttgaaacagatttcaagtgtgtggcttttctagtaaacttcgatcagcataacacaccaaaggtagaattccgtaatatatctctggagctggcccctaagtccatcagtgttctctcagattgcagaaatgtagtttttgaaacagccaaggtgagtgatctactaaggaatatactctgttttttaattacatgtaaatacaaacacatcccctcatgttcatttatttatttgttttcatcacaggtaaatgctcagcatggttcaagaacagctaatgcagtacagtctctcaatgacattaataattggaaggcattcatagagccagttcctcaagacttgagcaagtctacgtacactggaaaccaactatttgaacagctcacaacaactaaagatgagacagattatctctggtacattgtcaggtaaatgagcttcgaagttagtgttcatgatctacttttacttgtcttcaatcattataactatatgacaagagaaattcactcaaatgcagctacaaaaatagagcaagtgatggcaaccagattgcccatctctatgtcaagtcactagcacatatattgcatgcttttgtcaacaatgaatatgtaggtaagtatcctattagataaatgtcgtcccccaagtttctgaatatatacttttatgaaaattaacaccaataactagacaatatattgccatgaactaaatgtgcactatttttgtctctcagataatggtattttctccattatattttacatatgatacgttacattgctcctatcagaattcacttttatctaatgttgaataattgccctcaataatttggttagggagtgtacacggcagtcatgatggacctcgcaatatagtgctcaacacgcacatgtctcttaaggaaggagataacaccatatcattgcttagtgtaatggttggatcaccggtaagaaccctgcaatctgtcatggtaatttaaaaaatgttgcagaaactatgatggaggaagccattatgttcagataaacagggccttcaacaaatgagaaagttgtgctggtgtgatatgtatatatttatatgcaagttgcactcagagtaaattgagtaagggtgtgtttggttgggtggatgggagatggctgcctggttttttgatgtgttttgtttgtgggcacatgggtgttaacacttcttgattcaataattttcacaacataaacccctgagcctgagtaccataaatttgtataataaatattcactctcttacttagtgagctacctagtcatccatgaaagttaagctttatctgctaattggaaggattctggcgcctacatggaaagaagaacatttgggattcagacagtgggtatacagcagggacaacagccaatgcatctcctcaacaacgacctatggggataccaagtaaataagtcaatccatttggaatttaaacaaaaagtgcaatatcacaagctcaatcctgtgctgaaatattaattgcaggttggcttatttggagaaaaggatagtatctacacgcaagaaggaacaaacagtgttcgatggatggatatcaacaatttgatatatcatccgcttacttggtataaggtaaagaaaatagcaaactcgatttcctctttataacattaaactacaccttaacatcgtttattttgtgatctagacaaccttttccacaccaccgggcaatgatgcagtgacactaaaccttactagcatgggaaagggcgaagtatgggtcaatggagagagcatcggacggtattgggtctccttcaaggctccaagtgggcagccctctcaatcactgtaagtagagcctctgcctctcagcacaaagttcttgtgtattcactataaccttaggaacaaaatcatcgtcgcaatgcatttctgaagatatcacataccacgaggcttcctgacacctaaagacaatctcctcgtccttgttgaggaaatgggaggcgacccgctacagattaccgtgaatacaatgtctgtcacaacagtatgtggaaatgtcgatgagttctccgtcccccctctccagtctagaggaaaggttccaaaagtgcgaatctggtgccagggaggcaatcgtatctcatcaattgagttcgcaagttacgggaaccccgtgggagactgccgaagctttagaattggaagttgccatgcagaatcatcagaatccgtcgtaaagcaggtatagaaatacaaccctcttatcacttgtaaactatacacacaaggttataatgtgctctctaattagcaatttaactgtttgtttctttctcagtcttgcataggcaggaggggatgttctattcccgtaatggcagccaagtttggaggtgacccgtgccccgggatccaaaaaagtcttctagttgtggcggattgcaggtga</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001187506.1 RefSeq:Os05g0428100]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 5]]
 
−
[[Category:Chromosome 5]]
 

Latest revision as of 08:30, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information