Difference between revisions of "Os08g0170700"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
GeneName = Os08g0170700|
 
Description = Disease resistance protein family protein|
 
Version = NM_001067627.2 GI:297608051 GeneID:4344769|
 
Length = 8534 bp|
 
Definition = Oryza sativa Japonica Group Os08g0170700, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
AP = Chromosome 8:4133297..4141830|
 
CDS = 4133297..4133611,4134192..4136208,4136481..4137359,4137925..4138201,4138295..4138349<br>,4140176..4140396,4140927..4141053,4141825..4141830|
 
GCID = <gbrowseImage1>
 
name=NC_008401:4133297..4141830
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008401:4133297..4141830
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggagagaggagagaaggagaagaaagaaatgtcttcagtggttggaaaggaggttgtagatgcttcctcacttatcactaagggtgatatgaaggatttgctagaggatttgttgaagatgggcatgatagtgggtcatgtgagctacaattgtcccactcctcggaacattggcggcagggggttaattcgaggagggcatggtggatttggtggaacccgtggtggatttggaggagaccgtggtggctttgggggaaaccgcggtggtagaggaggtgactggagaggtcgcggtggaggtcgtggtaggacagaggttctcctcaggccaatgcagccattgaggagggtagtggtgatggtaaatctatcatcatttttactattaccacctaataactacttaaattatccgcattggctccacctctctcctcccctctccgcgtgggacggtgtccgtggcgtcgcggcatcggccacgggcgggacaactgttcctgtgattaatccggccgtttccgcggcggatccagcatcagtggtgggcgagaaactgaaggcggccgttcttgcagcgaacccagtgttggcggcatcggcaatgggcgggggtagtatcggtcatgttggcggcaggcgaggcggtcgttcttgtgtcagatccggtgtcgacagtgggagaggagctttctcgatcgcaatcatggagctggtgatgggggcaatggaaaacctgatccccaagttgggtgagctgctcaaggaagagtacgtcatgcagtcgggcgtgagagagaagatccagtctgtctcacgggagctcgagagcatccacgctgctctccgcaagatcggcaaggtgccatgggagcatcttgacgatgagttgaggctttgggcgcacgaccttagggaggcgtcgtatgacatggaggacatcatcgactccttccttgtgcgcgtcgacggccatgaggcaagtgaagttcactggttcaaatggttcttggagaagatgaccaaccagttcaacaagatcaaggctagccatgaaatcggtgtcgcaatgaaagaaatcgatgagaagctccaggaggtggctaccaggcatgcgaggtacacaatcgacaatattgccatcaatcctgcaggcccagcaactgtcgatcctcgtctcttgagtatgtacaaaacattggcagagcttgttggaattgaggggcccatggatgagctcatgaagatgttggatattgatttgccgaccaagaagaggaagatcgaaatcgatgtgtccgttagaaaaccgaagatggtatccatctttgggtttggaggacttggcaagaccactcttgccaaagcagtctacgacaagcttaaaccaagttttgattctggggctttcattccggtcggtcagaatcctaatattaggaaagtttttagggatattctcatggatcttgacaagcagtcatacaatgacttaaatctaaagctgctggacgaaaggcaactcatcaacaaactccaggaattcctccaaaaaaagaggtgttttgtagtcattgatgacatatgggataaggattcatggaggttaattagatgtgcactacaagacagtaaccatgaaagcagagtagtcacaactactcgtatttatgaagttgccacacaagtgggcgaagtttacaaaatgcatccactttctcatgatgaatcaaaaaaattattgtacacaagaattattagcggtgaaggtgagtctctccgtagtacatcggttgaggcatgtgacaaaatactaaagaaatgtggcggtgtgcctttagctatcatcataatagctagtctgttggccaataaaccaagggaatactggtccgaagtgtataactctattggtttagaacatggatacaatgatgacgtagataatacaagaaggatattgtctttgagctactatgatttgccgttgcatctgaagccgtgcttattgtacctaagcatatttccggaagattattatattgagaaaaatttgttaatatggaagtggatagcagagggttttgtacatgagaaacaagcagcaaagttagggttatttgaaaccggggagggatatttcaatgagttgataaacagaagcatgatccagccagttgagcatgaatactcagggtacatgtgtggttgccgtgttcatgacatggtacttgatctgatcctcttattgtcaggtgaagaaaactttgtcactgtagtagatggcagtaaggaacatgaactttcatggaaaaatgcccgtagattagctctacaacattggagttttgaagagaacaggaatcagttggctaatatgggtgtgaagcaaacaaggtcccttattatgactgagtgctttgataagaacatgcaattaccgagcttccaagttttacgtgtactagaaatacaaaagcaaggccgttggtggaacattgatggtaaaattaacctgcagcatgttagaaatttacttcaccttaggttcctccatctagattgtattgattctattcctctcatagagcaattcagaaatttgaggtttctacaagtacttcatctgaaggaatctaacatacaagagctgccagagtcagtgggcctgctaacaaaattgctgtccctacgtgttgatattgatgtaagggtgtcgcctggtgtgatcgagaagctgacgtccttacaggagctgtatttgtggccttatagtgatgatacgttccagttcgtgaaggtcctaggcaagctgagggaactgagggtgctgcatgctaaaaaccttaagcttgatggacagggcgagacatcagcactgctggagtccctatgcaatctgcacaagatccaaactttggacattgacctaaatcttaatccaaatgagggtgtcacgtgggatgcaggattcacttcccctcaatgcctccgatacctctgcttggtgtctttgaggtttcatagaatgccagagtggattaattggtcgcttcttccaaacctctcttatcttgaattgagagtgaattttttggaagagctagaccttgaaacccttgggaggttaccaaaactacgatacctccatctgtttatacactgcgacaggatagtaagcatcgggaagattgccggtgctggtgatgcctgcttccaagagttgagatttttgaacacaccctacttgtatgtccggtttgatcagcatggcatcatgtgcagcaaagacgaaaaagctgtcatgccaaacgtcaaaactctcagtttttgtgtttatgtgcggatcctaaaagataccgacatacttggatttgacaagctgtttagcttcgctcatcttggaagaagttcgctccaacaagtccaagttaacatccaatgtcgtggtgctcgtgccatggaagtcgaggaagcggaggcggcgttggcacacgcagccgccatccatcccaaccgtccaacccttcaaatccataagttttcggagggagaaatgcttccccctcacgaggagcctagcagcttctttcctaaagttgttgtcgaaaatctcaatgcgcatgagagaaaggacgacgatcttcgttttgtcctcggacagatgctccagcgtaatccatgcgtaaagaaattcagtgtctccatcaactgtgaaaatgcatgtcttgaggaggtggagaaagcagaggcggctgcgagatatgcagtcgacttccacgcaaaccgcccgacacttgaactggtaaaatatggtgaagataagatggtgttgtctggccaacaccaacaggtatgcaccccaggttgcctatctgattctaatccctag</cdnaseq>|
 
AA = <aaseq>MERGEKEKKEMSSVVGKEVVDASSLITKGDMKDLLEDLLKMGMI                    VGHVSYNCPTPRNIGGRGLIRGGHGGFGGTRGGFGGDRGGFGGNRGGRGGDWRGRGGG                    RGRTEVLLRPMQPLRRVVVMVNLSSFLLLPPNNYLNYPHWLHLSPPLSAWDGVRGVAA                    SATGGTTVPVINPAVSAADPASVVGEKLKAAVLAANPVLAASAMGGGSIGHVGGRRGG                    RSCVRSGVDSGRGAFSIAIMELVMGAMENLIPKLGELLKEEYVMQSGVREKIQSVSRE                    LESIHAALRKIGKVPWEHLDDELRLWAHDLREASYDMEDIIDSFLVRVDGHEASEVHW                    FKWFLEKMTNQFNKIKASHEIGVAMKEIDEKLQEVATRHARYTIDNIAINPAGPATVD                    PRLLSMYKTLAELVGIEGPMDELMKMLDIDLPTKKRKIEIDVSVRKPKMVSIFGFGGL                    GKTTLAKAVYDKLKPSFDSGAFIPVGQNPNIRKVFRDILMDLDKQSYNDLNLKLLDER                    QLINKLQEFLQKKRCFVVIDDIWDKDSWRLIRCALQDSNHESRVVTTTRIYEVATQVG                    EVYKMHPLSHDESKKLLYTRIISGEGESLRSTSVEACDKILKKCGGVPLAIIIIASLL                    ANKPREYWSEVYNSIGLEHGYNDDVDNTRRILSLSYYDLPLHLKPCLLYLSIFPEDYY                    IEKNLLIWKWIAEGFVHEKQAAKLGLFETGEGYFNELINRSMIQPVEHEYSGYMCGCR                    VHDMVLDLILLLSGEENFVTVVDGSKEHELSWKNARRLALQHWSFEENRNQLANMGVK                    QTRSLIMTECFDKNMQLPSFQVLRVLEIQKQGRWWNIDGKINLQHVRNLLHLRFLHLD                    CIDSIPLIEQFRNLRFLQVLHLKESNIQELPESVGLLTKLLSLRVDIDVRVSPGVIEK                    LTSLQELYLWPYSDDTFQFVKVLGKLRELRVLHAKNLKLDGQGETSALLESLCNLHKI                    QTLDIDLNLNPNEGVTWDAGFTSPQCLRYLCLVSLRFHRMPEWINWSLLPNLSYLELR                    VNFLEELDLETLGRLPKLRYLHLFIHCDRIVSIGKIAGAGDACFQELRFLNTPYLYVR                    FDQHGIMCSKDEKAVMPNVKTLSFCVYVRILKDTDILGFDKLFSFAHLGRSSLQQVQV                    NIQCRGARAMEVEEAEAALAHAAAIHPNRPTLQIHKFSEGEMLPPHEEPSSFFPKVVV                    ENLNAHERKDDDLRFVLGQMLQRNPCVKKFSVSINCENACLEEVEKAEAAARYAVDFH                    ANRPTLELVKYGEDKMVLSGQHQQVCTPGCLSDSNP</aaseq>|
 
DNA = <dnaseqindica>8220..8534#5623..7639#4472..5350#3630..3906#3482..3536#1435..1655#778..904#1..6#atggaggtaataacgaagtagagaatattagaaggatagtcttttagctactatgatctgacttcacatctgaaggctttcctattatatctcttggtgtaaatatgtaatgtatacgagggtctacttgtaaaatgtttttttttaagaatagaaggatgatgaaggggtgtgtaggcttgaagccccctgagaaattgccccaaaaccaaactacaatatggtattagagccaaaccctagctcaccggcgatctgtggggcggggtgaggcccagagcaggaggagggcgcgaggaaggcggctgggcctagagcagcggcatcgtacgcgtgaggcggcagcagcggcgcgtgtgcatgggccgcgctgggcccggagcaggtggttggcggcggcataggcgttgggcccagagtggcagcgtcatacgcgagcagaaggccaggcacgcgtgcgtgaggcagcggtgtccacagcgcgcgtgcgtgcaggaagaagaggagaggaagaaggagggaaaaagagggagaagggtgagaagaagaagaaggaagagaacagcaagaagaggagaaggaggaaggagtactatcaccggtagatttgggattttgtgtggttgatttaagaagaggaggaggaggaggaaggagtactatcaccggtaaatttgggattttgctgttgtgtgtggttgctgctagtagattgggatcttgttgttgtgtatggttgctgcttgctgctagtaaatttggtgctgcttgctgaagagaggagagaaggagaagaaagaaatgtcttcagtggttggaaaggaggttgtagatgcttcctcacttatcactaagggtgatatgaaggatttgctagaggatttgttgaagatgggcatgataggtcagaggaatgtagcaggagggtctaaactgaaactagaagtgatgccaagtgagttgaggttggaagggagcaaaaattatttgagttggtgtaggagagctcaactaatgttgagagcaaaaggggtggatcattttttgcaagagggttgtgaagagccctctgataaggagagccaagcatggaggacatggaatacaacaaatttaacagttatgctagtgagttgcagcagttatggacaaatcttgatcactgtgatcctctacagttgaagcatgaggaggacattgtgattggaaataaatggatgcagaggcgaagagtcattcatttcttgaaggggctgaacaaggagtttgaggatagaagagcggctatgttccaccaggctacattgcctactatggaagaggttatttttgctatggtgcaggagatgaggttgaaactgatgagaggcacaaatcttacaagatcagcatacactgtggctgataatagggaatgctacaactgtggacaagtgggtcatgtgagctacaattgtcccactcctcggaacattggcggcagggggttaattcgaggagggcatggtggatttggtggaacccgtggtggatttggaggagaccgtggtggctttgggggaaaccgcggtggtagaggaggtgactggagaggtcgcggtggaggtcgtggtaggacagaggttctcctcaggccaatgcagccattgaggagggtaaagctattaccctaacaggtgaacagctgacacagtgggaagaatggcagaagaacaagaccaatgagagctccaacaccaccactcactttagtaactttgccaactacgcctaagtggatgaaggtactcaggcacatgcactaattgcatctacatatagacatcctatagattggatcatagactcaggagcatcaaagcatttcataggattgcataatactttcacatcatacaccccttatatccgctatgaaactatctaaatcgttgatggtacatccaaacctatttatggtatagggtcggtagagtgcacatcatcaatgaacttatcttatgttcttcatgttccttcctttccagttaaccttctctcggtttgttcggctattgatcaactcaagtgcattgttgtatttgatgagaattcttgtctgttctaggagaagggactgggaggaggattgggactggagtcaggcgtgatgggttgtggtacatcaatcatgaggaactggtactagctgcggtggttggagatgtttagaaggagatcggtttgcttcattgttagttaggacatccatctttggggttttgagtaagttgtatccagacctctttagtagagtggatatgcatagactggtgtgtgatacttgtgagcttggtaaacatactcgctctacatatgttgggcttggccttcatagctatgaaccattcatattaatacattctgatgtttggggaccataccctgttacttctgtgagtggtttcaagtggtttgtcatctttattgattgtcatactcgtatgacttggatttatatgcttaagcataagaatgaggtccttcgatgcttccaggactttcataaattagtgacaacccaattttcttagaattattaaatatagaactattttcttaaagaaaaaagtccactcaaactaactattcaaactaactatttcattggatcgaacaccttaaattaatttttttcttattttacccttatatatactattgaaaatggttaactcagctccctcatgcctaacatttttgttttctataggctatatatttaggctgcaattttgtagacccacagatgacaccgttatcaatgttagaaaatattttctaactttttattatgattttttgcatgaaattttaaaactcgatatttaaatctatcttgagtgcttccaacctaaacacattaacccctcttaatataataaatctggacatatttgttatactaggataggttggcatttttgggacggagtaagtaagttgttaacatgtatcatcgacatacctaatttcaatgcaaaataccgcttatatagggagtgaaaaaagagaaatactattaaagggtaaagtgatccctttttttagtagtttgagagtgcaggatgagcttaaaaaaaattactttagagggttaactggtgtgacaaaatagttcgagtgggtaaaatggactatcttctaatatccaaaataaactaaactaaaatttagacttaaaaaatagaaactaaaatttagaatagtattatcgtcaaggcagcacaatggtagtactgccatatatatagactcttttacaaacatcggatgtttcctttacaggtcggtattattttattcaactagctagtgcgatctgaagactgaacagcccggccgcccttctttgtttcttattctcaacttgctttatataatatcttgaacgtaaattccaggaaattggtgcatatacactattaatttctgtttgcaggtagtggtgatggtaaatctatcatcatttttactattaccacctaataactactgtacgtgaccaataaacagttagataagatttatcttatttccagccaattttttatttatagtaattaattatttggaaattaaataaccagtaaattatccgcattggctccacctctctcctcccctctccgcgtgggacggtgtccgtggcgtcgcggcatcggccacgggcgggacaactgttcctgtgattaatccggccgtttccgcggcggatccagcatcagtggtgggcgagaaactgaaggcggccgttcttgcagcgaacccagtgttggcggcatcggcaatgggcgggggtagtatcggtcatgttggcggcaggcgaggcggtcgttcttgtgtcagatccggtgtcgacagtgggtggggcggcctatttaatgctatagatactattctaattattgggttaggaatggccttagtcgtcctctgctgctcaaccttctcttcagtcttttttatcgctgccctctgctgctcgctgctaccaagcgcacagctagctgctctcggacgaggcaacgacgactccttcccttcccttaaccattaagctactctaaaatcccaagcttcggatcgaatcgagctacgaatcgcgtcccagggcaaagaaaggtaggcctttttcagttaaaatttcaaaagatttcttgatggaagttttggatctgtgttgtaatcatcaaccggcacttctgggctggcaaacttaaagttttattactcagtggggaggtgcaggggtgaactaagaaactagagataaaactttcaactttttatatgtttgtcgttttgataaaatcgatgttgtttctgcgtgagttggaagtttgatgagaaaaattggagctaaaagttaaaaaagaaagaaattctgcttgaaaactcattatttatgtggtttgtgatgatgatgaaggagaggagctttctcgatcgcaatcatggagctggtgatgggggcaatggaaaacctgatccccaagttgggtgagctgctcaaggaagagtacgtcatgcagtcgggcgtgagagagaagatccagtctgtctcacgggagctcgagagcatccacgctgctctccgcaagatcggcaaggtgccatgggagcatcttgacgatgagttgaggctttgggcgcacgaccttagggaggcgtcgtatgacatggaggacatcatcgactccttccttgtgcgcgtcgacggccatgaggcaagtgaagttcactggttcaaatggttcttggagaagatgaccaaccagttcaacaagatcaaggctagccatgaaatcggtgtcgcaatgaaagaaatcgatgagaagctccaggaggtggctaccaggcatgcgaggtacacaatcgacaatattgccatcaatcctgcaggcccagcaactgtcgatcctcgtctcttgagtatgtacaaaacattggcagagcttgttggaattgaggggcccatggatgagctcatgaagatgttggatattgatttgccgaccaagaagaggaagatcgaaatcgatgtgtccgttagaaaaccgaagatggtatccatctttgggtttggaggacttggcaagaccactcttgccaaagcagtctacgacaagcttaaaccaagttttgattctggggctttcattccggtcggtcagaatcctaatattaggaaagtttttagggatattctcatggatcttgacaagcagtcatacaatgacttaaatctaaagctgctggacgaaaggcaactcatcaacaaactccaggaattcctccaaaaaaagaggtaggaatataatcaccaaacctttggcgcctattggtagagaatgcaataacaattaactttctccaaattattgcatgctacagtttgatgcagattcatgtcgttcctccttactacttctgtttatatatataacaaaatctcatgctactgtaatatggttgatggttttctgcggttgttgtgttctgcttgcttttacatgttcttccactagttttaattactaactctattccctttcattgttgtgtggatatatgtaccaggtgttttgtagtcattgatgacatatgggataaggattcatggaggttaattagatgtgcactacaagacagtaaccatgaaagcagagtagtcacaactactcgtatttatgaagttgccacacaagtgggcgaagtttacaaaatgcatccactttctcatgatgaatcaaaaaaattattgtacacaagaattattagcggtgaaggtgagtctctccgtagtacatcggttgaggcatgtgacaaaatactaaagaaatgtggcggtgtgcctttagctatcatcataatagctagtctgttggccaataaaccaagggaatactggtccgaagtgtataactctattggtttagaacatggatacaatgatgacgtagataatacaagaaggatattgtctttgagctactatgatttgccgttgcatctgaagccgtgcttattgtacctaagcatatttccggaagattattatattgagaaaaatttgttaatatggaagtggatagcagagggttttgtacatgagaaacaagcagcaaagttagggttatttgaaaccggggagggatatttcaatgagttgataaacagaagcatgatccagccagttgagcatgaatactcagggtacatgtgtggttgccgtgttcatgacatggtacttgatctgatcctcttattgtcaggtgaagaaaactttgtcactgtagtagatggcagtaaggaacatgaactttcatggaaaaatgcccgtagattagctctacaacattggagttttgaagagaacaggaatcagttggctaatatgggtgtgaagcaaacaaggtcccttattatgactgagtgctttgataagaacatgcaattaccgagcttccaagttttacgtgtactagaaatacaaaagcaaggccgttggtggaacattgatggtaaaattaacctgcagcatgttagaaatttacttcaccttaggttcctccatctagattgtattgattctattcctctcatagagcaattcagaaatttgaggtttctacaagtacttcatctgaaggaatctaacatacaagagctgccagagtcagtgggcctgctaacaaaattgctgtccctacgtgttgatattgatgtaagggtgtcgcctggtgtgatcgagaagctgacgtccttacaggagctgtatttgtggccttatagtgatgatacgttccagttcgtgaaggtcctaggcaagctgagggaactgagggtgctgcatgctaaaaaccttaagcttgatggacagggcgagacatcagcactgctggagtccctatgcaatctgcacaagatccaaactttggacattgacctaaatcttaatccaaatgagggtgtcacgtgggatgcaggattcacttcccctcaatgcctccgatacctctgcttggtgtctttgaggtttcatagaatgccagagtggattaattggtcgcttcttccaaacctctcttatcttgaattgagagtgaattttttggaagagctagaccttgaaacccttgggaggttaccaaaactacgatacctccatctgtttatacactgcgacaggatagtaagcatcgggaagattgccggtgctggtgatgcctgcttccaagagttgagatttttgaacacaccctacttgtatgtccggtttgatcagcatggcatcatgtgcagcaaagacgaaaaagctgtcatgccaaacgtcaaaactctcagtttttgtgtttatgtgcggatcctaaaagataccgacatacttggatttgacaagctgtttagcttcgctcatcttggaagaagttcgctccaacaagtccaagttaacatccaatgtcgtggtgctcgtgccatggaagtcgaggaagcggaggcggcgttggcacacgcagccgccatccatcccaaccgtccaacccttcaaatccataagttttcggagggagaaatgcttccccctcacgaggaggtacgctcacacaaatgggcctcatcttttcgtttatgtttatacttatcagctaaaatttaaatttttaagtttaaaattagagcttatttcgaggttttttcattgaaatttattttaattagcctctgtttttagatcgctaagaacacttatataaacgttttatgcacatattatttttcctttgcaaatatagcgtttgacttattccacgaataagcgaaatgatgggctgattaatcaatcggactttttccgatggtctctattggtactgttatactacgcactactattattatcaacagtacaagacgtctcaactgttggtttatgacttctagtactggtagaaaaagagtattcgactagtacttggtgtggcagtataaataaataccggtttaaattcgtttataccgttagtaaaagaacattatatttataaaacacttcttggaactttcagtgaccgctggctcccatttttggtgattgagctgtgtatcatctattcttctctatattaattagttttcttcttctttcttgatggccacttgcttctccttcccagcctagcagcttctttcctaaagttgttgtcgaaaatctcaatgcgcatgagagaaaggacgacgatcttcgttttgtcctcggacagatgctccagcgtaatccatgcgtaaagaaattcagtgtctccatcaactgtgaaaatgcatgtcttgaggaggtggagaaagcagaggcggctgcgagatatgcagtcgacttccacgcaaaccgcccgacacttgaactggtaaaatatggtgaagataagatggtgttgtctggccaacaccaacaggtatgcaccccaggttgcctatctgattctaatccctag</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067627.2 RefSeq:Os08g0170700]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 12:56, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information