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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]] |
| − | GeneName = Os08g0224700|
| |
| − | Description = Similar to 26S proteasome subunit RPN2a|
| |
| − | Version = NM_001067813.1 GI:115475362 GeneID:4344971|
| |
| − | Length = 5380 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os08g0224700, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
| |
| − | AP = Chromosome 8:7590567..7595946|
| |
| − | CDS = 7590673..7590824,7591767..7591936,7592034..7592148,7592234..7592402,7592532..7592666<br>,7592756..7593075,7593339..7593474,7593571..7593819,7593914..7594134<br>,7594253..7594511,7594611..7595318,7595442..7595771|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008401:7590567..7595946
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008401:7590567..7595946
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcggcggcggcggtgatggtgagctcggcgagcgggctgctggcgatgctgcaggagccggcggcggagctcaagctgcacgcgctcgccaacctcaactccctcgtccacgtcttctggcccgagatctccaccagcgtccccgccattgagagcttatatgaagatgaggaattcgaccagaggcagttggcagcattggttgtttccaaggtgttttactaccttggtgaattagatgattctctgtcttacgcactcggtgctggaccactatttgatccctccgagggttcagactatgctcaaacacttttagcaaaagctttagatgaatatgccagcatccgatcgaagtccttgaaagcagcaggtgaaggggatgaaaaaatggacccaagattggaggcaattgtagagagaatgctggataagtgtatacttgatggaaaatatcaacaggccatgggtatgtctcttgaatgcaagagacttgataagctagaggaagcgatatctcgatccgataatcttaatggatctctttcttattccatcattctatctcatcaatatgttagtcaccgtgaatatcgctgtgagattctccgatgtcttgtaaaaatataccagacactgccaaatccggattacttaagcatttgccagtgtcttatgttcttgggtgagcctgaaactgttggaaacatcttgggcaagctgctttctggaagcaaggatgatgctctccttgcattccaaattgcttttgatcttgttgaaaatgaaaaccaggccttcctcctgaatgtgaaaaatcaccttgacacgctgagtttgcagacttctgcccagactttacctagcgatcaaactgctgctacagaaccatctggagatgcccaaatgacggatgatgctatcacaccaaatggaaatgcgcacactgtagatccaaatgaagtagcgcacgctgataggctgaccaaaattaaggggatactgtcaggggagacgtctattcagttgacattgcagtttttatacagtcataataggtctgatcttctgattttgaagactataaaacaagctctggaaatgaggaatagtgtttgtcatagtgcaactatatgttccaatgcaatcatgcatgcaggaacaacagttgataccttcctaagagaaaacttggaatggctaagtagggcaaccaactgggctaagttcagtgcaactgctggattaggtgtcattcatagaggccatctcacacaaggcagagctttaatggccccataccttcctcagagtggtgctgcaagtggtggtagtccatattctgaaggtggtgccctttatgctctgggtctgatccatgcaaaccatggtgaaggaatcaaacaatttcttcgtgagagccttcgcaacactagttctgaggtcgttcagcatggtgcttgtctgggacttggacttgcagctttaggcacagccgacgaggaaatatttgaggatgtaaagaatattctttacactgacagtgctgtggctggtgaggctgctggcattggcatgggcttgcttatggctggaacagccagtgagaaggctggagagatgcttgcctatgcacatgatacacagcatgagaaaattattcggggcttgtcacttggaattgcattgacagtttatggcagggaagaggaagctgacaccttgattgaacaaatgactagagatcaagatcccatactccgttatggtggtatgtacgcattggctctagcgtacaggggaactgcaaataacaaagctatccaccagcttcttcattttgcggtgtcagatgtgagcgacgatgtccggaggactgcagtattggctcttggttttgtcctgtacaatgagcctgagcagactccaagaattgtgtctctgctctctgaatcatataatccgcatgtccgttatggtgccgctttagctgttggaatatcctgtgcaggaacaggattaagtgatgccatctccttgttggagcctcttacatctgatgttgttgacttcgtgcggcaaggtgctctcattgcaatggcaatggtcatgatccaaactaatgaatcatatgactctcgtgttggaacattcaggcgtcagttggaaaagatcattctcgacaagcatgaggacaccatgagcaaaatgggtgccataatggctactggtatccttgatgctggtggtaggaacgttaccatcaggcttcagtccaggtcaaagcatgacaagctgactgctgttgttggccttgccgtcttcacccagttctggtattggtacccgctgacatatttcatcagcctggccttctctccgacggcttttattggcctcaactctgacttgaaagtgccgaagtttgagttcctgtcaaacactaaaccatcgctctttgattacccaaagccgacaacccaacaaaccacgactgcttcagttaagctgcctacggccatcctatcaacatatgccaaggcaaaatctagggcaaagaaggaagccgaaagcaaagctcaggagaaagcagaagcaccaccaagtgaagatgcttctacttcaatgcaggtcgatggtgtggcggagaagaaagcccctgagcccgaaccgaccttccagatcctgactaacccggcccgggttgtcccggcccaggagaagttcataaaattcctggagggcggcaggtacgagcctgtgaagctggcgccctccggatttgtcctcctacgggacctcaagcccaccgagacggaggaactagtcctcaccgacgccccggcaactcaggcgacgaacgccgcagccgccaccgctggccagcaaggctcaggcgccgccgccatggccgtcgacgaggagcccctgccaccccagccatttgagtacacctcgtga</cdnaseq>|
| |
| − | AA = <aaseq>MAAAAVMVSSASGLLAMLQEPAAELKLHALANLNSLVHVFWPEI STSVPAIESLYEDEEFDQRQLAALVVSKVFYYLGELDDSLSYALGAGPLFDPSEGSDY AQTLLAKALDEYASIRSKSLKAAGEGDEKMDPRLEAIVERMLDKCILDGKYQQAMGMS LECKRLDKLEEAISRSDNLNGSLSYSIILSHQYVSHREYRCEILRCLVKIYQTLPNPD YLSICQCLMFLGEPETVGNILGKLLSGSKDDALLAFQIAFDLVENENQAFLLNVKNHL DTLSLQTSAQTLPSDQTAATEPSGDAQMTDDAITPNGNAHTVDPNEVAHADRLTKIKG ILSGETSIQLTLQFLYSHNRSDLLILKTIKQALEMRNSVCHSATICSNAIMHAGTTVD TFLRENLEWLSRATNWAKFSATAGLGVIHRGHLTQGRALMAPYLPQSGAASGGSPYSE GGALYALGLIHANHGEGIKQFLRESLRNTSSEVVQHGACLGLGLAALGTADEEIFEDV KNILYTDSAVAGEAAGIGMGLLMAGTASEKAGEMLAYAHDTQHEKIIRGLSLGIALTV YGREEEADTLIEQMTRDQDPILRYGGMYALALAYRGTANNKAIHQLLHFAVSDVSDDV RRTAVLALGFVLYNEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSDAISLL EPLTSDVVDFVRQGALIAMAMVMIQTNESYDSRVGTFRRQLEKIILDKHEDTMSKMGA IMATGILDAGGRNVTIRLQSRSKHDKLTAVVGLAVFTQFWYWYPLTYFISLAFSPTAF IGLNSDLKVPKFEFLSNTKPSLFDYPKPTTQQTTTASVKLPTAILSTYAKAKSRAKKE AESKAQEKAEAPPSEDASTSMQVDGVAEKKAPEPEPTFQILTNPARVVPAQEKFIKFL EGGRYEPVKLAPSGFVLLRDLKPTETEELVLTDAPATQATNAAAATAGQQGSGAAAMA VDEEPLPPQPFEYTS</aaseq>|
| |
| − | DNA = <dnaseqindica>107..258#1201..1370#1468..1582#1668..1836#1966..2100#2190..2509#2773..2908#3005..3253#3348..3568#3687..3945#4045..4752#4876..5205#gagctcttcttcttcccctcctccaagcaaaaggcaaaaaaagccgaagcagcgccgacgagacgagcatccaaatcgtcgaatccagcggcggcggaggcgggagatggcggcggcggcggtgatggtgagctcggcgagcgggctgctggcgatgctgcaggagccggcggcggagctcaagctgcacgcgctcgccaacctcaactccctcgtccacgtcttctggcccgagatctccaccagcgtccccgccatgtgagttgctccacccccacccaccttcagctgtagttttccctccccgccggcccgctgcgcccgatgcggcgtttcgcgcgattcggttcgattcgtggagtggggggttggggtttggtgctctatgtatgtgatgatgatgatttggatgagaggtggggttcggctaggaaggtgccgtgtggagggaggattcatgcgattagtgtcgtttggcctggttagattcgatctggcgatttttttggatgaaccctaggttggtttgatctgttaggctggagatttcgggaggggattataatgggcggttagtttcactggtactagaaaacctaggctttgtgtatggattatagataactcaaacttccctaactgttgtggttcattcatgtattattcttcgaggagttgctgtggtcgagaaaaaatattaattttttaaaaataatttgcgtttaggctcggattgccaaggcttttgtttgaagggttctaatgaagcataattttaatctgaaaacgagcaggtggagcctaggttgagacttctttttttctgtttattatggttggtttgaggaatatgcataatccttgactttgaagtgtctgaattgcaagactatacgcaggaacattttgtttgatctttagcgcttgtcctgtcaagtaaaaacattgagctaagacatgtgtcgtctcgtttcttgtttatgatttgttcatgggatttaatgggagctagatacattggaagaggcatgtccattaaatgttttggcagttgcaatttggtattatagtttctggaaattatgttctttattcattgtcacttaataacttggtagaacttaatattttcaaggacttctctattaagcatgaagtgtttctggttacttattttataatgttatatacttgttacagtgagagcttatatgaagatgaggaattcgaccagaggcagttggcagcattggttgtttccaaggtgttttactaccttggtgaattagatgattctctgtcttacgcactcggtgctggaccactatttgatccctccgagggttcagactatgctcaaacacttttaggtgaggaattgactaaattcattgcaatcttcttattttcatgttccaaagaaacaatattgacatagttttaaaatttgtttgttcctttcttcagcaaaagctttagatgaatatgccagcatccgatcgaagtccttgaaagcagcaggtgaaggggatgaaaaaatggacccaagattggaggcaattgtagagagaatgctggataagtatgatagaatcctcttatatcttctagtagctcatctgtaattaaatgcagttctcatctcattgatgcggaaactgtttcaggtgtatacttgatggaaaatatcaacaggccatgggtatgtctcttgaatgcaagagacttgataagctagaggaagcgatatctcgatccgataatcttaatggatctctttcttattccatcattctatctcatcaatatgttagtcaccgtgaatatcgctgtgaggtaagattacatcatggcagatttcaattgtaaagtctgtctcttagatttcttattggtatatacagcattcttcataaattttggaatgccataaaatgaccaagaacttatgtttgatctattcagattctccgatgtcttgtaaaaatataccagacactgccaaatccggattacttaagcatttgccagtgtcttatgttcttgggtgagcctgaaactgttggaaacatcttgggcaagctgctttctggaagcaaggtatgctggaaatatcttgtgtttttttttagttgtttaactgctgcttagtgtgtttatttgtcctaacatgtgcttttgctctacaggatgatgctctccttgcattccaaattgcttttgatcttgttgaaaatgaaaaccaggccttcctcctgaatgtgaaaaatcaccttgacacgctgagtttgcagacttctgcccagactttacctagcgatcaaactgctgctacagaaccatctggagatgcccaaatgacggatgatgctatcacaccaaatggaaatgcgcacactgtagatccaaatgaagtagcgcacgctgataggctgaccaaaattaaggggatactgtcaggggagacgtctattcagttgacattgcagtttttatacagtcataataggtactacctctgtcccaaaatatagccatttctagaatagtaccttgtctcaaaataaagttatttctccaactacctcctctcaaccaatcacacattttctccatcattcccacctactttcttaatatccgtgccaacctcaaaaatgctttacactttggcacggaggaagtaatgtgataatatctgacaaaattattgcagctggtcatgcatttaagttttgaatcttatgttgattttggtaattgatttgacaggtctgatcttctgattttgaagactataaaacaagctctggaaatgaggaatagtgtttgtcatagtgcaactatatgttccaatgcaatcatgcatgcaggaacaacagttgataccttcctaagagaaaacttggtacatttcatagtttacctatttgttaatgcagttctatgctcatgcatttttctccctttctgatcttcatttgcatataaccatctgttacaggaatggctaagtagggcaaccaactgggctaagttcagtgcaactgctggattaggtgtcattcatagaggccatctcacacaaggcagagctttaatggccccataccttcctcagagtggtgctgcaagtggtggtagtccatattctgaaggtggtgccctttatgctctgggtctgatccatgcaaaccatggtgaaggaatcaaacaatttcttcgtgagagccttcgcaacactagttctgaggtattttttcagggtcatggtctcttattttgtttagacagtccctatcactgtcatgaaaaaatattctaaactttcaaatattattgtacaggtcgttcagcatggtgcttgtctgggacttggacttgcagctttaggcacagccgacgaggaaatatttgaggatgtaaagaatattctttacactgacagtgctgtggctggtgaggctgctggcattggcatgggcttgcttatggctggaacagccagtgagaaggctggagagatgcttgcctatgcacatgatacacagcatgagaaaattattcggtaactattttttaaactcttggcaagcaagttcccactgtaatctagtactaggaatttgtttctcaagacggtaaatatgttcatgttctgatacactgactcctcttttctccaggggcttgtcacttggaattgcattgacagtttatggcagggaagaggaagctgacaccttgattgaacaaatgactagagatcaagatcccatactccgttatggtggtatgtacgcattggctctagcgtacaggggaactgcaaataacaaagctatccaccagcttcttcattttgcggtgtcagatgtgagcgacgatgtccggaggactgcagtattggctcttggttttgtcctgtacaatgagcctgagcaggttagctttaccttattgattctttttattgtcaagattcttgtttgatttgagtcacttaatttgagcctgacttgcctagaattattttcaatgcagactccaagaattgtgtctctgctctctgaatcatataatccgcatgtccgttatggtgccgctttagctgttggaatatcctgtgcaggaacaggattaagtgatgccatctccttgttggagcctcttacatctgatgttgttgacttcgtgcggcaaggtgctctcattgcaatggcaatggtcatgatccaaactaatgaatcatatgactctcgtgttggaacattcaggcgtcagttggaaaagatcattctcgacaagcatgaggacaccatgagcaaaatgggtgccataatggctactggtatccttgatgctggtggtaggaacgttaccatcaggcttcagtccaggtcaaagcatgacaagctgactgctgttgttggccttgccgtcttcacccagttctggtattggtacccgctgacatatttcatcagcctggccttctctccgacggcttttattggcctcaactctgacttgaaagtgccgaagtttgagttcctgtcaaacactaaaccatcgctctttgattacccaaagccgacaacccaacaaaccacgactgcttcagttaagctgcctacggccatcctatcaacatatgccaaggcaaaatctagggcaaagaaggaagccgaaagcaaagctcaggagaaagcagaagcaccaccaagtgaagatgcttctacttcaatgcaggtaagagctacagtgctaactacctaccttgttccttttttgccaccttgttcatgtctttgctacacaatgacatgttatagtctccaaattactcatgctggtctcaatccatgaattcaggtcgatggtgtggcggagaagaaagcccctgagcccgaaccgaccttccagatcctgactaacccggcccgggttgtcccggcccaggagaagttcataaaattcctggagggcggcaggtacgagcctgtgaagctggcgccctccggatttgtcctcctacgggacctcaagcccaccgagacggaggaactagtcctcaccgacgccccggcaactcaggcgacgaacgccgcagccgccaccgctggccagcaaggctcaggcgccgccgccatggccgtcgacgaggagcccctgccaccccagccatttgagtacacctcgtgatcccttgatgatcccagggctaaacacttgtactgtttgtttctaacttggtagccatgatggaatcaaatgtttctttcacaaagcttatgaattgattctttccattgatttactggtttagtgtgtggaaaaattgttggtattagtcaccagagtaaaatatttcacctgc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067813.1 RefSeq:Os08g0224700]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 8]]
| |
| − | [[Category:Chromosome 8]]
| |
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Annotated Information
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Structured Information
