|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
| − | GeneName = Os09g0533400|
| |
| − | Description = Peptidase S16, ATP-dependent protease La family protein|
| |
| − | Version = NM_001070304.1 GI:115480350 GeneID:4347683|
| |
| − | Length = 6613 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0533400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| |
| − | AP = Chromosome 9:21777907..21784519|
| |
| − | CDS = 21778047..21778130,21778400..21778501,21778618..21778863,21779077..21779271,21779378..21779671<br>,21779987..21780200,21780498..21780628,21780831..21781037,21781116..21781317<br>,21781402..21781529,21781794..21781877,21781990..21782169,21782316..21782407<br>,21782655..21782824,21783261..21783372,21783486..21783589,21784297..21784406<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008402:21777907..21784519
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008402:21777907..21784519
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaacaaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcagtgtgaagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcggggtgctccctgtgcatgactccgaagctgctggctcattgctgtctcctggtgtaggcagcgattcaggtgagggtgggagcaaggcgcctggtggttctgcaggagaatcaacgaagcaggatactaagaatgggaaggagaccattcactggcacagccggggagtagctgctagggctttgcacctttccagaggtgtggagaaaccaagtggaagggttacatatattgtcgtccttgaaggtttatgtaggttcagtgttcaagagctcagtgcaagaggttcatatcatgtcgctcgtgtctcacgtcttgatatgacaaaaacggagttggagcacgcagagcaggacccagatctcattgctctttctaggcagttcaaagctactgcaatggaactaatttccgttcttgaacagaagcagaagacagttggtaggactaaggtgcttcttgagacagttcctgtgtacagactagctgatatttttgtggctagctttgaaataggttttgaggagcagttgtcaatgctggattcagttgacttaaaagttagactttccaaggcaaccgaacttgttgacaggcacctgcagtcaattcttgtagctgagaaaataactcaaaaggttgagggtcagctatcaaagtctcagaaagagtttttgcttcgccagcagatgcgggctatcaaagaggaacttggcgataatgatgatgatgaggatgatgtagcggcattggaaaggaagatgcagaatgctggaatgcctgctaatatttggaagcatgctcaaagggagttaaggcgtctaagaaagatgcaacctcagcaacctggatatagcagctctcgaacctacttggaacttcttgctgaacttccttggcaaaaagtcagtgaggagagggagcttgaccttagagctgcaaaggagagtcttgaccgtgatcattatgggctgaccaaggttaagcaacggattattgaatatttggctgttcgtaagcttaagcctgatgccagaggtccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgatagcaaaggcactaaataggaagttcataagaatctctcttggtggtgtaaaggatgaggctgatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatggactaaagagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggttctgatgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaataaaacgttcaacgatcactatttgaatgttccatttgacctgtcgaaggtcatatttgttgcaactgccaacaggatgcaacccatcccccctcctctgttagataggatggaagttattgagctaccaggttacacacctgaagagaagctaaaaatagccatgaaacatctcataccaagggtactggaacagcatggcttgagctccacatatcttcagattcctgaggctatggtcagactcatcattgagagatacacgcgagaagctggtgtacgtaatcttgagcggaacctagctgcattggcccgtgcagctgcagtcaaggttgcggagcaagatagtgcgcttagacttggcaaggaaatacaaccaattactacaactctactggattctaggcttgctgatggtggtgaagttgaaatggaagttattcctatgggccaggacatatcaaatacttatgagaatccatcacccatgattgttgatgaggctatgctagaaaaagtgcttgggcctccaagatttgatgatagcgaagctgcagatcgtgtggcgagcccaggagtgtcagttgggcttgtttggacttcatttggtggggaggtacaatttgtcgaggctacagcgatggtgggtaagggtgatttgcatctgacagggcaacttggtgacgtaattaaggagtcagcacagttagctctgacatgggtgagagcaagagctgctgaccttaatctgtcacctacttctgatattaacttattggagagtcgtgatattcacatacattttcctgctggcgcggtgccaaaggatggtccttctgctggagtgacattggtaacatcattagtgtcactatttagccaccgaaaagtcagagctgacactgctatgacgggagagatgactcttaggggccttgtgttgccagttggcggtgttaaggataaggtacttgcagcacatagatatggcatcaagagagtaatattgccagaaagaaacatgaaggacttggctgaggttccagcacccattctctctggcttggagattctgcttgtgaagcgcatcgaggaagtacttgaccatgcttttgaaggtggatgccctctgagaccacactccaagctatag</cdnaseq>|
| |
| − | AA = <aaseq>MADAAVELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQE LWQREEKGLIGVLPVHDSEAAGSLLSPGVGSDSGEGGSKAPGGSAGESTKQDTKNGKE TIHWHSRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSARGSYHVARVSRL DMTKTELEHAEQDPDLIALSRQFKATAMELISVLEQKQKTVGRTKVLLETVPVYRLAD IFVASFEIGFEEQLSMLDSVDLKVRLSKATELVDRHLQSILVAEKITQKVEGQLSKSQ KEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQNAGMPANIWKHAQRELRRLRKMQP QQPGYSSSRTYLELLAELPWQKVSEERELDLRAAKESLDRDHYGLTKVKQRIIEYLAV RKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTY IGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY LNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLEQ HGLSSTYLQIPEAMVRLIIERYTREAGVRNLERNLAALARAAAVKVAEQDSALRLGKE IQPITTTLLDSRLADGGEVEMEVIPMGQDISNTYENPSPMIVDEAMLEKVLGPPRFDD SEAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQLGDVIKESAQLALT WVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFSHRKV RADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNMKDLAEVPAPILSGL EILLVKRIEEVLDHAFEGGCPLRPHSKL</aaseq>|
| |
| − | DNA = <dnaseqindica>6390..6473#6019..6120#5657..5902#5249..5443#4849..5142#4320..4533#3892..4022#3483..3689#3203..3404#2991..3118#2643..2726#2351..2530#2113..2204#1696..1865#1148..1259#931..1034#114..223#ttcgtcgtcttcgtcatcgtctccaacctccgatttcaattccagcgcgggagccgtaatcccctccacttccgtacgattccagcgcggtggggtgggcgaggtgcgtggccatggcggacgcggcggtggagctgcctggacggctcgcgatactgccgttccgcaacaaggtgctcctcccgggggccatcgtgcggatccgctgcaccaaccccagcaggtaagtagtgggggcggcgtcgtcgtcggcgcccctcgagcggattccgcgcaccgcgagattggggggtttcacggtctcgggttgtgtgggttttctagggtggaattttgggtggtggccgatgggctgattgggcgcgcgggggtttgggtggtggatggattattagtccaagttaggtttaatcagcgtgtggttggtaaaatcgcagtagcttagctttgtttgatgctattgtattggcttagtcagcttagctcatgattcgtgaggcctttttcttcgatttcgtctgtggttttgtgaatttgtgtggagcaagtagaaattgctttttcttctttttctttttctgcttttttgtattgtagtcgtcacttgttgttttctcgatgggatgatctcgtctgtgatgtgaacagttaaaaagtttccagcgcagtttgatgaactcgctgaatccaaagtggtttagagcggctttggttgctttatggttgactaattcagctcctaattatatctgtttggtgttcaaaccttctaggcgtgttgtacttacttgtggttcagattagtattgagatttttcctctgtgtatgcgtacgatggctttgctagtgtgtgttgacttggtgggaagggaaaattctgccttttggtttggattttgacttcatcaatgtacttgtttctcctgcagtgtgaagcttgtggagcaggaactctggcaacgggaggagaagggtctgatcggggtgctccctgtgcatgactccgaagctgctggctcattgctgtctcctggtgagataaaggctgctgctgctgctgttttttttttaatttggttctgtgagccatttgtgggcattgttgtatggtggtttcttactgttattgctgttgctcgcatataggtgtaggcagcgattcaggtgagggtgggagcaaggcgcctggtggttctgcaggagaatcaacgaagcaggatactaagaatgggaaggagaccattcactggcacagccggtgtgtaacattgccatctttgctaatatgtgtttttccatatggtcatatctctgaacaagatttaaagaagaaattcctttgaatatgtcgggaatagtgggaaaacaatagcatacgattactaaaggtaaacaaactagtgttagtgtgggcacatgctcttattacattctatgaacacttgataagttgatagaagcaaataattttctttctgttgggcgcactatgcgttggtgtgacattgcattaacttgcagtgggcttagataaagcaagagggttaagattggttgatagtggtcaactcttctttgacacaattatttgattgagaactgttggaaattagtcaattttgttgtgttttcctacctgtctccctttctccaaaaaaaggtgtgtaacactttttcattccgtccatctataggggagtagctgctagggctttgcacctttccagaggtgtggagaaaccaagtggaagggttacatatattgtcgtccttgaaggtttatgtaggttcagtgttcaagagctcagtgcaagaggttcatatcatgtcgctcgtgtctcacgtcttgatatgacaaaaacgggtaagatcttgtttgttaaaaatattagtttatttttgttgctattttcctgcactacattgtcataagtctgttgtagctgttattttgtacagctccacccttttcttccactttccattgtagttatgccgatagtttggtggtatattagtttattcttgtaccttctttgttaagtgccttttgaattcacctaatatcaaattctaacacttacattattaatgtttgtgcaatttgctagagttggagcacgcagagcaggacccagatctcattgctctttctaggcagttcaaagctactgcaatggaactaatttccgttcttgaacaggtgaagaaatttaacagagcgctataccctaaatagatattcccaatgtgactatcagatctgcagtctcatctttctgttatccatgacatttttctttcaaggttatgtatgacttacggcaatgatgttgtttctaattgcagaagcagaagacagttggtaggactaaggtgcttcttgagacagttcctgtgtacagactagctgatatttttgtggctagctttgaaataggttttgaggagcagttgtcaatgctggattcagttgacttaaaagttagactttccaaggcaaccgaacttgttgacaggcacctgcaggtgaagacatttatgattagtgaattagttttccttaattttaataacttcatcatcaaaggtttaaacattgggtagtttttaacttatttcctttccttgtgatgaacagtcaattcttgtagctgagaaaataactcaaaaggttgagggtcagctatcaaagtctcagaaagagtttttgcttcgccagcaggtttgtttgcccatcatgttattttctgttcttgaagattcaggattttcgggctgctgatgtttttgctctcaacaattatgtcagtataagttacatttcatcatacttacatgttttttgaaagtttgaaagtatacatgatgagcacaaccctttttttacgattcacatcttgttggagtttatttgctttgtttccattgcttcttttgtgccacattgttttgtttccaatatgatatcaacccttttaatgcacagatgcgggctatcaaagaggaacttggcgataatgatgatgatgaggatgatgtagcggcattggaaaggaagatgcagaatgctggaatgcctgctaatatttggaagcatgctcaaagggagttaaggtaacttatcatctcattctcaatgtacaattgtacaggcatgtggtaccgccggttcctatatctagttgttttttcttgcaggcgtctaagaaagatgcaacctcagcaacctggatatagcagctctcgaacctacttggaacttcttgctgaacttccttggcaaaaagtcagtgaggagagggagcttgaccttagagctgcaaaggagagtcttgaccgtgatcattatgggctgaccaaggttaagcaacggattattgaatatttggctgttcgtaaggttggtacacatgcataaatttatgtgcttatgatatcatgtattttctctctcatgggtgcacgttaatactggcagcttaagcctgatgccagaggtccagtcctgtgttttgtgggaccacctggtgttggaaagacatcattagcatcgtcgatagcaaaggcactaaataggaagttcataagaatctctcttggtggtgtaaaggatgaggctgatattaggggtcaccgaagaacatacattggaagcatgccaggacgtctcattgatggactaaaggtttaatcacttgtttttcttatttcaggagtaacttatgaccttacaatttctttgaccagaccaatcttgttttacttttgcttattaatgtcgtatttccacctgacaaaccattttgtgtttctaatatacttaagtcttggattaatagtgaaatctcttgtgctatattcatattctgcccattaaaaaaatgcagagagtatcggtcagcaacccagtgatgcttcttgatgaaattgacaaaactggttctgatgtacgtggggacccagcatcagcgctgctagaagttcttgaccctgagcagaataaaacgttcaacgatcagtatcctttcaaattattcagataatgaacagcattttctgattaattggttactttcttaatggagttgggggggatcactacctgtggacatctttctattgtgtttttcatgtaccgctcaattttcatatttagttggatagttacagtttatttcccccattatctgcaatgctatgttctgggttgcctataacttgcgtacactacacaatgcttagagaagagatttctttacttgatatatgatctatattatcatacatttagaattccttaacatgttttcaccagctatttgaatgttccatttgacctgtcgaaggtcatatttgttgcaactgccaacaggatgcaacccatcccccctcctctgttagataggatggaagttattgagctaccaggttacacacctgaagagaagctaaaaatagccatgaaacatctcataccaagggtactggaacagcatggcttgagctccacatatcttcagattcctgaggtaagatatgcagttttctgctgcatcctttgttgcctataaagaaattcggcatattgtttgattaaaaatagtttagtttgatctagaatcaatgcaagattagtgaatgtggagagctggagatgcatactatttaccatgcttttgcacctttgatgaaacagtaggcactgcctgattgtgctctgctaaataatagagttgatctcatcattccgatattttgctaacagcagtactttgatgaactgctacatttttgggttaagttcttgactcctgagtatttcgtcatgcttgccatttctccaggctatggtcagactcatcattgagagatacacgcgagaagctggtgtacgtaatcttgagcggaacctagctgcattggcccgtgcagctgcagtcaaggttgcggagcaagatagtgcgcttagacttggcaaggaaatacaaccaattactacaactctactggattctaggcttgctgatggtggtgaagttgaaatggaagttattcctatgggccaggacatatcaaatacttatgagaatccatcacccatgattgttgatgaggctatgctagaaaaagtgcttggggtatgctattaaacatttgagtattgagtatagccttatgagaagctacagagttctttctttttgtttgtcttacttatggtaatatgctatatttgtgctacagcctccaagatttgatgatagcgaagctgcagatcgtgtggcgagcccaggagtgtcagttgggcttgtttggacttcatttggtggggaggtacaatttgtcgaggctacagcgatggtgggtaagggtgatttgcatctgacagggcaacttggtgacgtaattaaggagtcagcacagttagctctgacatgggtaagcatcttctttaactttcacctatctatgcattggttgcatcatgctgctttgtttattttctgctggttctctgatatcgccctttgaagttatttttctccaattattgttactggaatgaaactccaatattacataagaagaaaacacaatgttttggtgcctagttttgcatagtggtactcatcatttccttggttttgacaggtgagagcaagagctgctgaccttaatctgtcacctacttctgatattaacttattggagagtcgtgatattcacatacattttcctgctggcgcggtgccaaaggatggtccttctgctggagtgacattggtaacatcattagtgtcactatttagccaccgaaaagtcagagctgacactgctatgacgggagagatgactcttaggggccttgtgttgccagttggcggtgttaaggataaggtactgccctataggttcctgacatgttatttaattgacttcagaaggatgaaagcttaaccattttctctgctctgctctttgactaacttgaaatgtttttttctggaattcaggtacttgcagcacatagatatggcatcaagagagtaatattgccagaaagaaacatgaaggacttggctgaggttccagcacccattctctctggcttggaggtatgtattgagagctttgctctatgtatttcgacagtcagagatgctctaaggccctgagcatatagttgatatgtatggtgcacaaattgtttcggagttaaaaaatatatcatagataaagtagcattggaagaaatttccgataccatatagtagacgtatgttttgaatcgtagatgaccagtaaatagagttttcccttttgggtgcaatgtagctgtctaaaaaatgtctattgctgactttacttcgacctgctactgtagattctgcttgtgaagcgcatcgaggaagtacttgaccatgcttttgaaggtggatgccctctgagaccacactccaagctatagcatcaaccaatctgaagatggcgtttgatctggtatactttcctgctggttatgtacctattttggagattcatccataaaacaaggttcagatttccatgaaagagcaactattccacgaggtagaatctcacgccaaa</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001070304.1 RefSeq:Os09g0533400]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 9]]
| |
| − | [[Category:Chromosome 9]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
