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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
| − | GeneName = Os09g0538800|
| |
| − | Description = Similar to Synaptotagmin C|
| |
| − | Version = NM_001070335.1 GI:115480412 GeneID:4347715|
| |
| − | Length = 9597 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0538800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| |
| − | AP = Chromosome 9:22044982..22054578|
| |
| − | CDS = 22045271..22045399,22045505..22045636,22045753..22046106,22046196..22046442,22046524..22046600<br>,22047006..22047080,22047153..22047254,22047364..22047482,22047896..22048019<br>,22048116..22048166,22048282..22048380,22048874..22048984|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008402:22044982..22054578
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008402:22044982..22054578
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgggtgtgattagtacggtgcttggtttctctgggtttggctttggattctccgctggtattgtcatcggatactacttcttcatctacttccagccaactgatgtcaaggacgtcaaagttcgcccacttgtcgaatatgactcaatatcgttggacggtatccttcctgaaattcctttgtgggtcaagaatcctgactatgatagaattgattggctgaatagatttttggagatgatgtggccttacctcaacaaggcgatctgcagaactgcactggatattgcaaagccaatcattgaagagaacaggaagacgtataaactagaatctattgagtttgaatcacttacattgggtagcttaccacccacctttcaaggaatgaaagtgtatgtcacagaagaacaagaattgataatggaaccatctcttaagtgggctgcaaatcccaatgtcactgttgttgtaaaggcttatgggttgaaagcaactgtccagattgtggatctgcaagtctttgcttcacctcgtattactctgaagccattggtccctacatttccttgcttcgcaaaaatccttgtttctctcatggagaagccacacgttgacttcgggctgaaacttttcggagcagatttaatggctatccctggtctttacagatttgttcaggagaccataaaaaagcaagttgcgagcatgtatttgtggccaaagacattggaagttcccataatggatccctcaaaagcttctaagaagcctgttggaattctacttgtgaaagttttaagagctcaaaacctgcgaaagaaggatctgttgggtaaatcggacccatatgtgaaacttaagatgtcagatgacaagcttccgtccaagaaaacaacagtgaagcgtagcaatctcaatccagagtggaatgaggatttcaaatttgttgtgacagaccctgaaactcaggcactggaaattaatgtctttgattgggaacaggttggcaagcatgagaaaatgggcatgaacaacattctgttgaaagaacttcccgcagatgagactaaagtcatgactgttaacttgcttaagacgatggatcctaatgatgtacaaaatgagaagtcccgtggtcagcttactctggaggtgacatataagcctttcaaggaagaggatatggagaaagaaggcatcgataatgctgatgtggtggagaaagctcctgatggtactccagctggtggaggactgctttatgttgttgttcatgaagctcaagatcttgaaggaaagcatcacacaaacccatatgcaaagataattttcaaaggagaagagaagaaaacaaaggtaatcaagaaaaacagggatccacggtgggaggacgaattcgagtttgtatgcgaggaaccccctgtaaatgataaactgcatattgaagttctaagtaaagcttcaaagaaaggattgatacacggcaaggaaaccttaggctacattgatataagcctcgcagatgtgatcagcaacaagcggatcaatgagaagtaccacctcattgattccaaaaatggtcagattcagatagagatgcagtggagaacttcatag</cdnaseq>|
| |
| − | AA = <aaseq>MGVISTVLGFSGFGFGFSAGIVIGYYFFIYFQPTDVKDVKVRPL VEYDSISLDGILPEIPLWVKNPDYDRIDWLNRFLEMMWPYLNKAICRTALDIAKPIIE ENRKTYKLESIEFESLTLGSLPPTFQGMKVYVTEEQELIMEPSLKWAANPNVTVVVKA YGLKATVQIVDLQVFASPRITLKPLVPTFPCFAKILVSLMEKPHVDFGLKLFGADLMA IPGLYRFVQETIKKQVASMYLWPKTLEVPIMDPSKASKKPVGILLVKVLRAQNLRKKD LLGKSDPYVKLKMSDDKLPSKKTTVKRSNLNPEWNEDFKFVVTDPETQALEINVFDWE QVGKHEKMGMNNILLKELPADETKVMTVNLLKTMDPNDVQNEKSRGQLTLEVTYKPFK EEDMEKEGIDNADVVEKAPDGTPAGGGLLYVVVHEAQDLEGKHHTNPYAKIIFKGEEK KTKVIKKNRDPRWEDEFEFVCEEPPVNDKLHIEVLSKASKKGLIHGKETLGYIDISLA DVISNKRINEKYHLIDSKNGQIQIEMQWRTS</aaseq>|
| |
| − | DNA = <dnaseqindica>9180..9308#8943..9074#8473..8826#8137..8383#7979..8055#7499..7573#7325..7426#7097..7215#6560..6683#6413..6463#6199..6297#5595..5705#acttttctcagcacgtagtggtcggccgagagcctcgtcgaagagggcgctgccgccatcccgttcccggcgaccgccgccgccgcaggccagtagtcgttgagcagcatcttgatgccgtccaccagttgcattgcacccacgagcggcgcctgctgctgcacggctatcagctcggcgtcgctgaacaccttgcggcaagcggccgttgacctcgacgccgccaccgccgccgccgccgccgcacgtgctctctctgcagtctgcgctgcgtcagctctcgccgcgcgtcggctctccggcatcgaccctgccaaatccttccttctgctcgctccccaaggtacacccgttgcggctttctccgttctgcttgctgctcggctgcaccgcaaataggagcatttcacttcttctcttacttagaaagaaccaaacaatcaatatgcgaatcacatgctcactgatctctccgctaaatcaacacacacatatcaaagattttcaccatcggttgctatgctcctcccatcagattggatttgcatatgtttgtttcttgctgacactgtggcgccaccgcgccgccgacagcgcccctggaccctggtgagagagagaaagagcgagggggatctgagagtgggagtcgccgacagcgccgctcctccccggccgcccgcacgctgcttctctaccggccgcgcgccaccccttccccgcagcccgtctgcagctcctcccctcgctgccgcctcgtgggcggctgccggcgggtgagcccgcgcgccgtccctccccggccgcccgcccgcagctcctcccccaccgccgccgcgtcgccagtagccgccatcaccgccgtcgcgtcgccagtcgccggctgccgacgccctcctctcccgtcccgcctcgcactacggcctcgcagaggatggagagagagatgaggaagggagaggggagaggaaaagggagataatgatgatgtggccacgctgacatgtgggtccatatgagtttcacgctactcagcgccacgtcggacaaaaccgaaatcaaaaccaccaaaaaaaaatctcaaacgaaaccgttcggtttagttagttgagggacgttgtggttgggggacaattttgtaacccgatgacaagttaagttgaggtatcttcggtgtactttttcctttattagtagatcctgttcgaatccgacgtttgctttcacgagagaatgggcctgaaggaaggggagcaaggtcgttgtcgaacaattcgagggcctatccaatccgacgcaacgctgccgacacaggacagcttcaaaggtgtctgcagtctgcatgattatacacccccagtatgcgccattccaccgaggagatagcgagatgcattttgtcctgaaaacgaactatggcctgatggagacatacactgttcttaccacacacaagtattatatgagttccgaggaaattacgcatatcaagcagaattttggccctttctgcgtcaaggagagtagcgagtttttttctggctgggaaacgtctcacgacttggagcatccacgtcgtctttgctctgttgcacgacgcgacacgaccgatcaatccgttgtctgcatttggatcatgaaaataacgccctgatttgactggtcgggtgatgaaccggtggtacgtgcgtggctgctactgacctggttgctaggccatgcaaatgcctccgattttctgctgtcgaaattttaatttaaaattgtcgagagtagtttatttttcagtttaaaattgcttaggtataaatataaagttttccttagaaattagtttttattactaataaggtatttttacggcttatcagcttaaggccgccaaactaatggccaaaatgaaatgcagagacatgctctttatttgttcgttgccatttggcaacctcgcatgtaaccaaaattgatggtctacttgtttcaaaaaaattgatggtctacgtgaaaagcagattaagaaaacagatagataggaaaagcatacttcttccattttataatatacggagtaatagcctagcactagataaaatatatcatactacgaaactaaatagacttgctatctagattcattatactaatatatatcccatccaatactaatctttctctttcataaaaaaccaatcaaatacacagtgtggcatattctacttgaatatcgacaacctcatgtccacgtagtagtactatgatgtgtcacattatgtcctgattagtattttatagaacgaaagaattagacttttatattttgagacatgtgtactatgattttaatagaaatataagggtaaacagagaaccgcaaaaaaaaaaaacaagaatcaccgtttgaacggatcataggaaaaacacaagaaattgaaagaaaacaacttcgatggaaaaaaacatcaaatcaagttgtaaaattctgtagcgtcttataagctacatagaaatcgagaagagcatataactttagaccctgtttagatgggactaaaactttaagtccttatcacatcggatgtttggacactaattataaatattgaatgtagactattaataaaacccatccataatcttggactaattcgcgagacgaatctgttgagcctaattaatccataattagcctatgtgatgctacagtaaacattatctaattatggattaattaggcttaaaaaattgtctcgcgaattagctttgatttatgtaattagttttgtaagtagtctatatttaatattctaaattagtgtctaaatacagggactaaagttaaagttaagtgtctggatccaaacaccaccttagatagaaggaaaaaaacccatgtatagaatgtctcttcatacagactctatataaactaaaaaaaattggaataatctaatccgatgacacacgggaaaaaccctgagggcatgtacaaaggtagagtctaatatgagctctctatactaattaatatcactaaagacaatcctcctataatagtagaggtaataagatttctaaaccattaatgtatcaaataattttttattatacttatttccttttctccaccctcatgcaacaaattttccattatgctaagagtccactctgagctgttatcatgcgtagcaacgatatttctcatttcttccatctctttcttccacgtcaccaaatttacttgcataacagtgaagagagcccattattacataccattgtacatgcactgatggaatcatacatataaaaagaagaaaccatgactgtccattacctaaaaacgaggtaagatgcctgtttgttttcctctaaaatttctataagtggaggagattaatttcagaactaatataaattctggagggtgggattatccgaacacggttcatttcactttcagaactaatataaatcctcgagggagggattaaccgatggttcatttcacgggattttcaatgaaaatttcgaggaccaatcatttgctgcgaataactacatcggaattttatgattcaaatcctaaaaaaaaatcctttccctttcatacgttcgaaaggatcctttttaaaacacttcacgcaaatttcgctgatttttggtactgcacgacacaagacaagaaaaggtttgaactacaaaagttggggggggggggggggggcagatgagccagggaggaccatgaccatccccggtccccacacgtcggcgtccccgagatcactcatccgactccaccacagttcacacttcacacccatccagcagcaggcaggagaggagaggagaggaaacaaatcaaactcgcttcgcttctttaattaggcactcgtctccctcctccctcttccaccccccccccccccccccccccacacacacacaccttggatcgcggcctcacgcgcgtgaggcgccgcaacgcaacgtgcgaccccgacctctcctcctccacctcggcttccccccaaattccatctcctcgcctcggcgaatccgattccgagcactcacaaccggatcggagcgagttccatggcctgaatctcagggggggtgactggccgaggagcgggctctctctctcactggttcgtctcctcctcttcctcttccccgactgctcggatcggtcgtcgttctcgcgttggggggcgatctaggtttttgttcgttgcctggatttttgggctgttgtaggattggatgggagtttttgatttttgttgggtgttttctcgtctgtccggttgcggctaaagttggattcgtctagggttttttttttcccactgtaggatcgattttgaatttttgatccgtgcaatcgtaggggcggattgggttcaccatttttggggtacattttcgtgcgacttttttttatttgctggcgattaacgtcgatttgagacaattatcgaatcatgtcttatttaggagaaacatgcatgaagtgagtcagtgaattcggcaaaactaatttgcttccgtttggaattacctttcgtatgtgaacactgtgcgcggatgtgttgtttgagcaatattatgaataatgtaaatttgtgaatctagcatagataaactgtgcaattcatttcatgtttttggttgaattctatttaatcgaacaagagaaaatttcacactctgtaacaatattctctgtcctacctccaagcgaactttattctcttttttttcacaagcagatcccaccactatattttgttgaaatcttcagtttggtgtacagcggatttgctctaatacgaaacccaccccaaaagcaaagattaaagcgccaaccccacagccaagcaagaaaccatccgtaaagcacacctttgatgttcttttcttccaccacttgaatccaccttttgtcttctcgcttaattatttaattaaaacattgcaactttgggtggttccagcctatattattctgaaatctgcattatcatttttaaagtttacaagttttctcttcaccatatgactatatcttcttgttaccgaaccaattggcattagctgtgctaaactttgtttctatcagtctcctgcaggtcgttttcactattttttattaaaagaactttcaacatgtacttttttttttgggtgatatgcgggtgaaggttactttcatactgtcgtactaggggggaaatcttgattgatgggcccctccagtttctaatgttggaagttgctccatgttgctttctgcaatttgttcaaatctgtttgctctgaattttgcttatgccgggatattttgatgctctcacgcaaaaagctgaatagagtattttcaccaaaaaaaaaaaagaggaggtacgagctagtgatagggatctggctagaccacttgttgttctctcatgattcagctgaatgaagtgtttcaattgattaatttacctgagtgtaagcctttgtttcatcttccgacatgtttgatttttgcagccttaggctgaaatctgctataactttggaggtactaaaacgagtctgagatgggtgtgattagtacggtgcttggtttctctgggtttggctttggattctccgctggtattgtcatcggatactacttcttcatctacttccagccaactgatgtcaaggtgcacatctatatttcaatgattctcttcctttcatactgtataaaattttatcatattgtcatataatgaatacttgtgttgtggaatgtgtggtgctgcttattaacagatgtctacaccttacaaccaaaatggcctgggaacagtttggctcttgctgttacagaaaataatttgacgacggaggcattgatgaactcatttagttttttgtgaagtcctaattcagttagtctcaaccacatactgttaatatgccatatataagcatctattattttatttgggtgtttaaacgatatctttcatgattttcaaataaaggcaacctttcagttggtgtatgatgacctattacactatatatatgcatgtacatgtccattgataccatatgtactggaacggcacacatttgagtttttcttggtgtaatgcaccatattgttgtgctgcatgggggtaatttcttcctctgattgcctttcaggacgtcaaagttcgcccacttgtcgaatatgactcaatatcgttggacggtatccttcctgaaattcctttgtgggtcaagaatcctgactatgatagagtatgcttacccattctttaaactatcatctactcgctgaagaaaactcatgcacttgaacagcatcaatgctagcttatctcatatttctcatcttcctcttattctttgttagattgattggctgaatagatttttggagatgatgtggccttacctcaacaaggtacccttatcttgctgtagactacaccaagtcaccaagaatgaaatggatctctctgattgacaatagaaactttattgtgcatttatcctgtaggcgatctgcagaactgcactggatattgcaaagccaatcattgaagagaacaggaagacgtataaactagaatctattgagtttgaatcacttacattgggtagcttaccacccacctttcaaggttagtgcactttctcattatatacatgcatacatatgtagttcacatgtcttttccttagaagtggcccttgtttctgtatattgtgcaaacagttgtgttcatatcaacttgttttacgatcaactgtaatcaaatcagcatcagagtagttatggtttgcatcgctggagatatagaatatgaatgcattgctactactttgttcccactaagctgtcatactatgtttttatgaccaactctatgcattatagccataggtctgtacagcttgtttattacttattgtaagttaatgtcatatggacatcaccataaacatgtatggtggacaataatgttctatgtgctcagctctctttgtaccctggcattacactgaatctgttgtatgatatttgcttctccaggaatgaaagtgtatgtcacagaagaacaagaattgataatggaaccatctcttaagtgggctgcaaatcccaatgtcactgttgttgtaaaggcttatgggttgaaagcaactgtccaggttttttttttgtcatgggctgaagtagtaattggtgttctcattatgtgatatgatatagaattgagctaattaagttattcattgttcatgtgaaacaaaatttcagattgtggatctgcaagtctttgcttcacctcgtattactctgaagccattggtccctacatttccttgcttcgcaaaaatccttgtttctctcatggagaaggtctgatatctgatcgcttgtatgtttattaccctgctggcaaccttcttactagttatgttggtttggcagccacacgttgacttcgggctgaaacttttcggagcagatttaatggctatccctggtctttacagatttgttcaggtattcctgactcctactttgagccttcttatgcgaaagtttgttggtctatggtgttgagattttcattagtttgctagaaatacgtagagctaaagtgagccgtcatgaaagaactgctacagttcttttaacattcacagcaaacttgtaatgtggtactgtaacttgcttctgttattggtctacacgtgcttagacttagattcgtacacacattcttatgtagcaaaagcaagatatttcttgtttgctataatttcatatcctatagccttgagcccttgacttgatgttatttgatggtgtctatcttagccattacagtggatgtgccacagactgcctcactccattcagtacaagtagttcatattttgaccacttccatttgtgcatttgcaggagaccataaaaaagcaagttgcgagcatgtatttgtggccaaagacattggaagttcccataatggatccctcaaagtacattatctatcacttagtctattatttgtttgtatgcagtttttgagatgccacattaatggttccatctatttgcagagcttctaagaagcctgttggaattctacttgtgaaagttttaagagctcaaaacctgcgaaagaaggatctgttgggtaaatcggacccatatgtgaaacttaagatgtcagatgacaagcttccgtccaagaaaacaacagtgaagcgtagcaatctcaatccagagtggaatgaggatttcaaatttgttgtgacagaccctgaaactcaggcactggaaattaatgtctttgattgggaacaggtatggaccgcttcattaatgaaatccgctacttttttctgcattttttataccaaaaaagacatgattatttcttttgatgtatacaggttggcaagcatgagaaaatgggcatgaacaacattctgttgaaagaacttcccgcagatgagactaaagtcatgactgttaacttgcttaagacgatggatcctaatgatgtacaaaatgagaagtcccgtggtcagcttactctggaggtgacatataagcctttcaaggaagaggatatggagaaagaaggcatcgataatgctgatgtggtggagaaagctcctgatggtactccagctggtggaggactgctttatgttgttgttcatgaagctcaagatcttgaaggaaagcatcacacaaacccatatgcaaagataattttcaaaggagaagagaagaaaacaaaggtactaatatcttgcaaatattattcacttgaacatctgcactgaaattgtttgtggtatgatctcatgtgcccccccccccccccaacctataaaattctacctcaattttgtaggtaatcaagaaaaacagggatccacggtgggaggacgaattcgagtttgtatgcgaggaaccccctgtaaatgataaactgcatattgaagttctaagtaaagcttcaaagaaaggattgatacacggcaaggtatttgttttgtgcctggaagttctgtcccatgccaacattttactttctcgacttgtgcatgatgaatatcagaatcactgatgagtattttaatttattcaggaaaccttaggctacattgatataagcctcgcagatgtgatcagcaacaagcggatcaatgagaagtaccacctcattgattccaaaaatggtcagattcagatagagatgcagtggagaacttcatagcaaccgtgatgaagtaggtgaaatgcttgaacttcgtgagatacaggatgatacatatgaatgttgttgctacaaacagagtttggccaatacctgtgattgagttctgtagatatttacttctttgtgtccaggcatctgttttaccttgttgagatattttgttattttttcaaaattgtgttgagaacaacgtagaagcaaccatgctattggcatcggaagtggaattagatgtgagatgtaatgacccattatccttcaatgcagataaacatagaattctggc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001070335.1 RefSeq:Os09g0538800]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 9]]
| |
| − | [[Category:Chromosome 9]]
| |
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Annotated Information
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Structured Information
