|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]] |
| − | GeneName = Os10g0390500|
| |
| − | Description = Alanine aminotransferase|
| |
| − | Version = NM_001071039.1 GI:115481821 GeneID:4348524|
| |
| − | Length = 6060 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os10g0390500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
| |
| − | AP = Chromosome 10:13324103..13330162|
| |
| − | CDS = 13324171..13324212,13325760..13325810,13326415..13326465,13326540..13326605,13326672..13326733<br>,13327120..13327198,13327279..13327383,13327485..13327595,13327678..13327815<br>,13328061..13328135,13328235..13328355,13328429..13328583,13328665..13328739<br>,13328821..13329024,13329766..13329882|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008403:13324103..13330162
| |
| − | source=RiceChromosome10
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008403:13324103..13330162
| |
| − | source=RiceChromosome10
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggctgctcccagcgtcgccgtcgacaacctcaaccccaaggttttgaattgtgagtatgcagtgcgtggagagattgtgatccatgctcagcgcctgcagcaacagctacagactcaaccagggtctcttccttttgatgagatcctatactgcaacattgggaatccccagtctcttggtcagaagccagttacattcttcagggaggttattgctctttgtgatcatccatgcttgttggaaaaggaggaaaccaaatcattgttcagtgctgatgccatttctcgagcaacaacaattcttgcctcgattcctggaagagcaactggagcatacagccacagccagggcatcaaagggctgcgtgatgcaattgctgctggaattgcatcacgtgacggataccctgcaaatgcagacgacattttccttactgacggagcaagccctggagttcacatgatgatgcagttactgataaggaacgagaaagatggcattctctgcccaattcctcaatatcctttgtactcagcctccattgctcttcatggtggagctcttgtcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaagcaactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatccaggaaatccaactgggcaggttcttgctgaggaaaaccaacgggacatagtgaagttctgcaaaaatgagggacttgttcttctggctgatgaggtgtaccaagagaacatctatgttgacaacaagaaatttaactctttcaagaagatagcgagatccatgggatacaacgaggatgatctccctttagtatcatttcaatctgtttctaagggatattatggtgaatgtggcaaaagaggaggctacatggagattactggcttcagtgctccagttagagagcagatctacaaagtggcgtcagtgaacttatgttccaatatcactggccagatccttgccagcctcgtcatgaatccaccaaaggctggagatgcatcatatgcttcatacaaggcagagaaagatggaatcctccaatcattagctcgccgtgcaaaggcattggagaatgctttcaacagtcttgagggaattacatgcaacaaaactgaaggagcaatgtacctcttccctcagcttagtctgccacaaaaggcaattgacgctgctaaagctgctaacaaagcacctgatgctttctatgcccttcgtctcctcgaggcaaccggaattgttgttgtccctggatctggatttggccaagttcctggcacatggcacatcagatgcacaatcctgccacaggaggagaagatccccgcgatcatctcccgcttcaaggcattccatgagggcttcatggcagcgtaccgcgactga</cdnaseq>|
| |
| − | AA = <aaseq>MAAPSVAVDNLNPKVLNCEYAVRGEIVIHAQRLQQQLQTQPGSL PFDEILYCNIGNPQSLGQKPVTFFREVIALCDHPCLLEKEETKSLFSADAISRATTIL ASIPGRATGAYSHSQGIKGLRDAIAAGIASRDGYPANADDIFLTDGASPGVHMMMQLL IRNEKDGILCPIPQYPLYSASIALHGGALVPYYLNESTGWGLEISDLKKQLEDSRLKG IDVRALVVINPGNPTGQVLAEENQRDIVKFCKNEGLVLLADEVYQENIYVDNKKFNSF KKIARSMGYNEDDLPLVSFQSVSKGYYGECGKRGGYMEITGFSAPVREQIYKVASVNL CSNITGQILASLVMNPPKAGDASYASYKAEKDGILQSLARRAKALENAFNSLEGITCN KTEGAMYLFPQLSLPQKAIDAAKAANKAPDAFYALRLLEATGIVVVPGSGFGQVPGTW HIRCTILPQEEKIPAIISRFKAFHEGFMAAYRD</aaseq>|
| |
| − | DNA = <dnaseqindica>69..110#1658..1708#2313..2363#2438..2503#2570..2631#3018..3096#3177..3281#3383..3493#3576..3713#3959..4033#4133..4253#4327..4481#4563..4637#4719..4922#5664..5780#gaaacccaacccgtcaacgctgccgctgaatctcactttctctctctgttcttggtgcttccgccgccatggctgctcccagcgtcgccgtcgacaacctcaaccccaaggtggtgatcctgcgcctcctcatgcccgtttcttgatttttcttttttttgttcttctcttctcttctctctctctttttttttgtgggggttgtagaggttcttgaggaaagattgcattttcgatgtgatgtggtgtgaggatagggattggctcggtttcggacttccggtggagtttaggggtcaaaaggagggattttttggtccctgttcttagttcgatttcttagcgtagcgaattgagcatccaatggtcctgatgttgtcatgggagtgattcagaaggggatatgggtggggcagtagggtgctcttgttttagataatggaagagttttgataagatggtgttctaatttgatggagtgggttgtgctctggttttttttctccagtgtagttatcatgcttagttcttgttcttgtgttctgcttgtctaaatctgtgaattcaaggtgcccagtccccagaaacgaggaattatcacacatgcagcgaggaggatctttcaattagcagggtagttgccatgagcaatttttagtctgcaaacagtaatagttttgtagttaattagagatgcagttcttttacttggatgctgttacttctattaacacagaggtagatctcagtactggttgagcagctgctggccttcagtttttgcctttttgccgtgatcgaacagtgccatgtaacatcagcatctcttttccctttcaaaatggaatatggcaatttcaatgaactgttgtcccacttctgctaccaaatagtgacatgaagatgctgaagcaccatattgttgtttcagtgagagcagagggtgctgctcacttgctccgatggcaacttgtgtcttgtgaagattcagttggattttaaggagataattatgcattagaatatttaatagcaactgcttttaacaagttctttttccctgtaggcttataaacctggaaaaaatattatattttgggtgttgtgttaaacaatggggaataaatatctgttaccttcctcatgatgtcattttcatgctatattggttcctactattattgaaaattgattatgatgctttgcctatttggcaagctggataatattgtgttattctaacactttcaaaagtactgcccgtgtggtctgcttttcattttcaacttgcgccattcaataattaattagcatttagctctatcagctgcactgaagcaaaacagtaatatagtatagtatcatggccactttatctatgtgtatatattatattcttccctgcaggaattattattattacagttacagtcacatgattgcttaactaaattgaatgtcatccactatcctgccatatagtcctaaaaattgatgcccttgacaagttcataacagttttagtttgagaatgcaattgcaatttccttcctgaagattacttgttctatttactggatttctagttattttctctccatctcttgatcaaccaggtgcctattctagtgcctaactaataagcttacccgtgcaggttttgaattgtgagtatgcagtgcgtggagagattgtgatccatgctcaggtatcttgagtgacgtcggtgtgttactttataatggttgtaacccgtgcagttttgatcttttttttcatttgtattcttcttgaatgaaaagttaaccagctagtcctatgaaccttttaaattaaagggatttttgttttcttgttcattaacttttaggtactttggcaatagaatagggattgaatagttgacagttgaatatagctgttagagcgttcggtgacaattcaattagtttgctgaacttgattatagaaatgttatttttatcgcacaatcttgcttgtttttttggaagtgttgaatccatatggttttgttggaacctaccaccaattagtgtcaattaattacttaactgcctagctcgcagagaataaagtagtcattgctgagatatataaagggagaatagtcagttaagtttcaccgtatctaacgaaaaggtttatcttgttgtctgtgtttgtctaacagtataaacttcttattcacatctccttgacttcccctgcagtagtaaactgtgctgttgtttttacaataattcaattacctgcttataatttgatatctatctgttttcttctgtttccagcgcctgcagcaacagctacagactcaaccagggtctcttccttttgatgaggttagtaactatcaatttaacataaaggagcttttcctggtagattattttctcattctgttttccccttgcagatcctatactgcaacattgggaatccccagtctcttggtcagaagccagttacattcttcagggaggtatgtggttatcttgccttcaagttttacattttgtttccatgatattcacatgctgtattgcaggttattgctctttgtgatcatccatgcttgttggaaaaggaggaaaccaaatcattgttcaggtgaatatcggcacctttatttcatcagcatcaaacagatatgcagagaacttaaatggagatatctagtgcaaacactcacattcctttagtttgcttaccatatacttcatccttttgtttctctctactgattgagttttgactagaaatattacatgttagttgagcataggagtttcaaaaaccaaaatcttattgagaaattttcaaggtggtttatccctagttaaaagggctaggactaaatcgattaactatgcaactggcatatcaccctaacttaatttctaaaagagttctgctcatgaacttccataaatagttgactatcatactgaaatttgaaattctagtgagtatctgatgccccatctttgctgcagtgctgatgccatttctcgagcaacaacaattcttgcctcgattcctggaagagcaactggagcatacagccacagccaggtgagcagctcaggctgatacatttactcactacaaagaaaaaaaaagaatcttaatttcaccgtactcatttttcctagggcatcaaagggctgcgtgatgcaattgctgctggaattgcatcacgtgacggataccctgcaaatgcagacgacattttccttactgacggagcaagccctggagtaggaactttaccttctttttaaatcttactggacattttttgaataaacaggaagcagttcgaatctcattatgatgctattctccccctctgttttaggttcacatgatgatgcagttactgataaggaacgagaaagatggcattctctgcccaattcctcaatatcctttgtactcagcctccattgctcttcatggtggagctcttgtatgttttgaattctcagcacattttcaatatggctgcattcatgctgcaccaaagcctaattgagagcattttgttttaggtcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaagcaactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatccaggaaatccaactgggcaggtttgcattcattgctttcttgtctaatttggagagcatcttggattgttgcaatttctgttcacaccatattctgcatgtatctacctaaggcatatatatttgcaattcttgtatctttttatgtgattttccattgttagggaacatatgtatttttgtttgtctgcaatgtgcatgaagcatttgcagctggtgcaggtacccaacaaaagaactgtaatcatgttttaattcatttgcaggttcttgctgaggaaaaccaacgggacatagtgaagttctgcaaaaatgagggacttgttcttctggctgatgaggtaagcgattgttacttgagcaactccacaacaaactttcagctgcttaattccttttcgctgtgctgtctgtaacatcaacactattcatattgataggtgtaccaagagaacatctatgttgacaacaagaaatttaactctttcaagaagatagcgagatccatgggatacaacgaggatgatctccctttagtatcatttcaatctgtttctaagggtaaatacgatgatctgttttcttattttctattggcactggattctcaaaaggattttcttgctgacaacaggatattatggtgaatgtggcaaaagaggaggctacatggagattactggcttcagtgctccagttagagagcagatctacaaagtggcgtcagtgaacttatgttccaatatcactggccagatccttgccagcctcgtcatgaatccaccaaaggtcaatgttctgtcattgtttaaatttctacctaagaaagtgcaaaagtctctaatcagataccattatttgattctgcaggctggagatgcatcatatgcttcatacaaggcagagaaagatggaatcctccaatcattagctcgccgtgcaaaggtataccaggattccaattctcttatactgctaaatgatatctgggaacaaattgtagaattgtttttttcttgatggcaggcattggagaatgctttcaacagtcttgagggaattacatgcaacaaaactgaaggagcaatgtacctcttccctcagcttagtctgccacaaaaggcaattgacgctgctaaagctgctaacaaagcacctgatgctttctatgcccttcgtctcctcgaggcaaccggaattgttgttgtccctggatctggatttggccaagtgagtcaacttaatctttatacgaagaatataatatgcttgtgcttgtatctgctgatactactggtttggacatattaagtcaaaacaaattttccttaaaagattcaacgtcactttttatgccaccaaataacaatcatggttttttttctcataagttcctgaatatatctttgtgttgagcttctgcaacaaatatctgaaaataatcatccctgaatagaacttctcatactattgcgttcttaccatgctatttggtcactagatattttgtactccctccgtccctaaatatttgacgccgttgactttttaaaacatatttgaccgttcgtcttattcaaaaaaattaagtaattattaattcctttcctatcatttgattcattgttaaatatacttttatgtatacatatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaatatttagggaaggagggagtactaaaaatttattactggcatatggtgatgttatcaactaaaaagattcctgggacacatcatgtatctgcctcttttgttctgtttcaacaactatcttgttataattctgtgtgtccaaacctgaaagctactttgaagtttacgaacaataagcactccatgcactttattttttggcatatccatggtactgattttgttttcctcttctactccaaaggttcctggcacatggcacatcagatgcacaatcctgccacaggaggagaagatccccgcgatcatctcccgcttcaaggcattccatgagggcttcatggcagcgtaccgcgactgaattgccattcaccattgaacagatggggagttctatacaagcctgatggattttccccaggccttctttttttttgtccccatgatagcatcatcgtgtagaccaaaacaaaataaatcaaagccagacatgcttttttttagtgtgctaatcacagagggtactgaaaaactgatgccttcgatggcaaattgaggagaaatttacctgccatttcgttgttgtgcctgttactgtataaatgttaagattttggtgcagaggcagctatagttttgag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071039.1 RefSeq:Os10g0390500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 10]]
| |
| − | [[Category:Chromosome 10]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information