Difference between revisions of "Os05g0508700"

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(Created page with "{{JaponicaGene| GeneName = Os05g0508700| Description = TRAF-like domain containing protein| Version = NM_001062532.1 GI:115464794 GeneID:4339268| Length = 8387 bp| Defini...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os05g0508700|
 
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Description = TRAF-like domain containing protein|
 
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Version = NM_001062532.1 GI:115464794 GeneID:4339268|
 
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Length = 8387 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0508700, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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Please input expression information here.
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AP = Chromosome 5:25237886..25246272|
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CDS = 25238537..25238714,25240310..25240421,25241181..25241269,25241348..25241416,25241500..25241629<br>,25242053..25242211,25242314..25242674,25242890..25242999,25243300..25243456<br>,25244883..25245295,25245375..25245567,25245931..25246272|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008398:25237886..25246272
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source=RiceChromosome05
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008398:25237886..25246272
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source=RiceChromosome05
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggcttgtgctgcagcaactgatgattctgctgcgagcacggctgggatgagggacgaggatcgtagcctgtctggcgagtcgttgtccgagtggcggtcctgcgagcaggtggagagcgagagcccttcgacgtccccgcccttttgggacactgacggtgatgacgatgatcctggccccaaaccttcagatttatttgggcggtatacttggagaattgaaaatttttcaaaggagaagaagagagaaatgaaaagcgagccatttgaagctggtggttacaaatggtatattcttgtataccctcaaggatgtgatgtttccaaccacctatcactttttctctgtgttgctaatcatgacaaacttctcccagggtggagtcattttgcgcagttcactatagctgtaggcaatatagatcctaagaaagtaaaatactccgatactttgcataagttctggaagaaggagcatgattggggatggaaaaaatttatggagttgtcgaagattcaggatggctttcttgttgatgatgttcttgaaatcatagctcaagttcaagttatcagggagaaggtggacaaaccatttcgttgcctcgatcgcccttatcgaagagaattgctccgtgtttatacgacaaacatcgagtcaatataccgccgttttgttgaggaacgaagaaataaacttagcaagctgattgaggacaaaatgagatggtccagtttttgtgctttctggtcagcaattgacccaagtactaggcatcggatgtctagagagaagactgatgtcatattaaaagtattagtgaagcatttttttgtggagaaagaggttacttcaacattagtgatggattctctgtatacgggcctgaaggtgcttgaataccagagcaagggcaagaaagggagaacgatagctgatttggatgaactgcctgcacccatgatccatgttgacatggacatgtttgttttggccagtgatgttatagatttgcttgagagagcagccttagaaccactgccttgtcaacctgtgtctccaaaggatgacaaatgttcccagagtcgcatgaaggatggtgcttctggtgaggttaacaaaatttccatggagcgcgaggaaagacgcctaactgagcttggtcggaagatacttgaaacatttgtgctatctcatatattcagtggaattgaagttgcgtaccaagaagctgttgctttgaagagacaagaagagttaattcgagaggaggaggaagaggcatggcttcttggaaatgagatgaaggggaagcgtgggggtggtgctaatgaaaaagataagcgtgcaaagaagaaacaggccaaacaaaagaagaacaatcgtaagattaaagacaaggaaagagacgaaaaatttgaagcaaagattctggaaagacttcatgatgaaactgcgattgatgatagtgatggcttatcatcaaagcaggccgaagaagtgacaacaaaggttgaaaacttggaagaaggtgcttcagataggcaaggtgatctagatagttcagaaattgctcaccgaccagactcaggtgacaagtatcctagacaaatgaatggactgagtgatgttactggcaatgcacaaaaggtaaagaaggcctcctctatggaggctaactcaccagtctttctggctgattctgttgctgcaagcggcactcatagcagaggaaataatttgtcagacagtaagaaccgcatgacaccaaatagagggaaaaatcagcgtaacaagggcataagcattatcagcttttctgaggaaggtgagggtattccctcgagttctactggtggttcggctcgttgtagttctagttgcggcacatctgcaaagttggaccaagataccgttctactcaccttgaaggataaactccgtaagctggggcaacgtctacatgagaaaaatatggaggggcgaaaacttctccaagctcattttgaagccatggaagcaaagacgagtggttcatctccctcatccagtcctttggatgaaacacctgatgttgtgaagagccctgagcagtctgcagaaggtacaacagatgcaaaagctaatggaacaccaaataaggatgaacccgtgacaaattgcgtggcagaggaatctgtttcagtcatgccaggcacaaagagtactgaagctttatctggcatggcccttgccaagacaaaagttgagccagtttcaaataaagatcatgttccaaaaccaacattgcaagccaatagagcatctgct</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MACAAATDDSAASTAGMRDEDRSLSGESLSEWRSCEQVESESPS                    TSPPFWDTDGDDDDPGPKPSDLFGRYTWRIENFSKEKKREMKSEPFEAGGYKWYILVY                    PQGCDVSNHLSLFLCVANHDKLLPGWSHFAQFTIAVGNIDPKKVKYSDTLHKFWKKEH                    DWGWKKFMELSKIQDGFLVDDVLEIIAQVQVIREKVDKPFRCLDRPYRRELLRVYTTN                    IESIYRRFVEERRNKLSKLIEDKMRWSSFCAFWSAIDPSTRHRMSREKTDVILKVLVK                    HFFVEKEVTSTLVMDSLYTGLKVLEYQSKGKKGRTIADLDELPAPMIHVDMDMFVLAS                    DVIDLLERAALEPLPCQPVSPKDDKCSQSRMKDGASGEVNKISMEREERRLTELGRKI                    LETFVLSHIFSGIEVAYQEAVALKRQEELIREEEEEAWLLGNEMKGKRGGGANEKDKR                    AKKKQAKQKKNNRKIKDKERDEKFEAKILERLHDETAIDDSDGLSSKQAEEVTTKVEN                    LEEGASDRQGDLDSSEIAHRPDSGDKYPRQMNGLSDVTGNAQKVKKASSMEANSPVFL                    ADSVAASGTHSRGNNLSDSKNRMTPNRGKNQRNKGISIISFSEEGEGIPSSSTGGSAR                    CSSSCGTSAKLDQDTVLLTLKDKLRKLGQRLHEKNMEGRKLLQAHFEAMEAKTSGSSP                    SSSPLDETPDVVKSPEQSAEGTTDAKANGTPNKDEPVTNCVAEESVSVMPGTKSTEAL                    SGMALAKTKVEPVSNKDHVPKPTLQANRASA</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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DNA = <dnaseqindica>652..829#2425..2536#3296..3384#3463..3531#3615..3744#4168..4326#4429..4789#5005..5114#5415..5571#6998..7410#7490..7682#8046..8387#gctgttcgctgcctacaaatcgcaattccccaatccatattcccttcccttcctttcctcctcctccatctccaccctcccgccgccgccgccgccgccgtcgccgcggcacactccccgggaccagcagaggccgccgccaacgccgcgggggcaggtaaaaaggcgcgcgagacgcccgcctctgcccgctgacctagatcggtagggtttactcgggcgcccgggtcgttcgtgtatgggggcgtgggcggtgggggattaggctttcggggtcggggggtcgggaaggtgtctgatcggatgatgggtggctctgttctccttctggggtgcggggttagagctagggctgtcgcggcgattttattttattttattttagttgaatttgaccggaatttccacgatttggatgggtttgtattggttggattgtggtaggagtgtttttataggggggttgggagtgagggggggtagggtttgttaatggtttttgagtgatataatctatttgattcctgttagggtcttctcctgggagatttcccggcgcggattttgttagcatttattaagtgtgcgcgtgttgttgttcatgcatgcagctgcggataaggttgcttgaagcagtggaagatttcctggatggcttgtgctgcagcaactgatgattctgctgcgagcacggctgggatgagggacgaggatcgtagcctgtctggcgagtcgttgtccgagtggcggtcctgcgagcaggtggagagcgagagcccttcgacgtccccgcccttttgggacactgacggtgatgacgatgatcctggtgagtaaatgcacttgcttcgcgttacgcgtgttaataatgactaaattatttggtccgtgtcgttgcaacgccatttgagcttaacatgattggttcggacttggaggaaatagcacaaattctcgagtagttagttgacgtagcacctgtatgcatgatgcgtcttgttcagttgcaagtgttagggtcatctaccttacagctgccagcccagacttcacaaaagatctcgatcagaaactggaaatggtcctcgttgcagagtagcttcagagtccagaagacagtatacacgtgtgctctcataaatgagacggttttgtagccttaatgcatagcgtccagtcaggtcatttatggaaatccgtgaattgtcaactgaagttgcttctggttagcaccctccatttcacaattttaatccagctactctgtactcaagtgtgcgttgaccggagaagcagacaatttaagaaataattaatgagggcaatacttaccccatacgttgctacctccattcccggaacataattaacgagggcaatacttaaatatacaatcttgtttcatccagaattcccggaacattctgtttcttcgaaaaaaaacataatacagtcaataatcctatttcatctgttatgctgttcatgttcgcatttaaattctggctggaatttgcgcttctaggcatttaggtacctgtgcttcaacctgaatagcaggagaatcgcatgctgcaaaccaacattactaattgcacagaaccgcagttcttgtattaatcttgtgaacaactactacacagctaggaggcaacctgcaatatagagaattgtgatatgcagacaatcatgatttcttgtaatgctcctttatcatagcttcgtacttgtttctctatttttaactcgcaccaaaatatgtttgcaaacacagtcatggctagataaatgttgtgtatactccaatatgtacaaaaaagatagctgtatgcctgccggtacatttttaattaaaatcaatcaatctacactggtatggtccatgggtccagtgcaaaatgtttcattccaataggcaaaacggaatgtccaccggaaaagtattgacatgtacgcctaataccatgcttaatatgtgttaatccattatttcttctctttccatgctgccttcaagtgtcatcttgactttcctctacaaactcaaattttgaattaatatttgctctatcaacaaggaatccagattcatttaccatctcttttcacgctacttcacaatgttatttggtctcattgtcattgatgcagtttatgttttgtgtacagtagtaaatatgattagggcatttaaataggtggcatgcttgccgggctgttctcacctgaattacgttcatgctagcgtcaacatttgctattgctgcatgaataagtttaactctctttcctggttcaagtcccaattcctggcatgtctgtttttgaactattttagtatttatagagtaaaatgctcttttttcctttagaagttcttttttctttccctattttaacctcatctctgaactaccattacaggccccaaaccttcagatttatttgggcggtatacttggagaattgaaaatttttcaaaggagaagaagagagaaatgaaaagcgagccatttgaagctggtggttacaaatggtaaaaggcttggtgaccattgctatgcatgatttaccaatgctttgcaatttacctcctatgctatccttttgtctcccaaaataaaattccgcatgatagtttttttcttgaataacctttatcctgtagacattagtacttttttgcaaatatgccttctttttcctcttatgttggtgcctagagaatggtattgtcaattttcatctcaccatgtttcctttccatgcaatgcaatcatatacaaacaccgcataattctgtcttatatgcattttttgacataatgtttgttatgtaggaaatgtaaactcgcacgattttgggcattataaaattgttttctgtgatttcttaattgaaaaaagatctttaacaagttttggataacgatgctgctttctttgccctatgttcgccaccacaatattgtgaactgttaggtttacttttctttattgcagccatttatttcatttagatgattattgggtttgaacactgttatctctgctttagctattatgtaaaaaaaaaaagaaacaactgtaaacatagcatactgcatactggtcaacatgtgatatttatttagggatttggcttacatgaccaccaaatattgtttgcttcaggaatctttgctgagggccataggaacaaatctaagagcttcttgtctctttccagtttaaatttgttatttatatatgcctatttacttattccttactttgtctgcttgctattttacaggtatattcttgtataccctcaaggatgtgatgtttccaaccacctatcactttttctctgtgttgctaatcatgacaaacttctcccaggtttggtttttgtagtctttgctgctatctaatggtgcaccatggacctaatatctcatattagtattacactttcagggtggagtcattttgcgcagttcactatagctgtaggcaatatagatcctaagaaagtaaaatactccggtgagtggaatttggcttgttctcttcctaggaagctaccattcttatcttcttgagcttcaggtcttaagtaaattttgtagatactttgcataagttctggaagaaggagcatgattggggatggaaaaaatttatggagttgtcgaagattcaggatggctttcttgttgatgatgttcttgaaatcatagctcaagttcaagttatcaggtagctaatctgtcagtgcgaacaattggtagctaatctttgtatcatggtgcttccaattcgtgtctacttaatctattaggctggttcatttgagcatgtctgtctttattgcttcatgtcctaatcgcgggaacaatatttttgaattttctacaggtagtctgccaatttatctcaaagcattgtttctttattcaattgcattccttttgattctactgtgatgttcccatggtgggaatttatttaatctattccagtttctcatttttttgctctaatttcctagcgttttgtagctcatacagaccagcaagatcacttgtatacattagatagtttgcctacttctgtttcttgttgatatgaattgactacaaactatcatgtaacatcatactgctgtatttaatatgtaagggagaaggtggacaaaccatttcgttgcctcgatcgcccttatcgaagagaattgctccgtgtttatacgacaaacatcgagtcaatataccgccgttttgttgaggaacgaagaaataaacttagcaagctgattgaggacaaaatgagatggtccaggtttgactagcagctattccaatataatatgctgcaataaaaagcaaagtattttttctttaattactgcctattgaaatgagatctttattggattttcagtttttgtgctttctggtcagcaattgacccaagtactaggcatcggatgtctagagagaagactgatgtcatattaaaagtattagtgaagcatttttttgtggagaaagaggttacttcaacattagtgatggattctctgtatacgggcctgaaggtgcttgaataccagagcaagggcaagaaagggagaacgatagctgatttggatgaactgcctgcacccatgatccatgttgacatggacatgtttgttttggccagtgatgttatagatttgcttgagagagcagccttagaaccactgccttgtcaacctgtgtctccaaaggatgacaaatgttcccagagtcgcatgaaggtagggattgctttgatgattgaagcatgatttttttccctgtttaataatctcagtataaatctttatgctcctagatatattatattgggaatattttttgttgtgagtttcttgtattgtatctgtgcatagttgtttggtgatcggtttattgcagagtagaggtttttctactggatttgcagtctgtcttactattctcactgtcataggatggtgcttctggtgaggttaacaaaatttccatggagcgcgaggaaagacgcctaactgagcttggtcggaagatacttgaaacatttgtgctatctcatatattcaggtaaaaagaattatttaggctgattttcttttggttaccgatgtagtgttggccagtaccaatagtcgatccctaggctttgtgggtggtttatgttgagccttgggcatttgaatgaaattatttgacctctaaaattcgaagacttctctaacagacaaactaccgaaattttagaaagctgcgtgtacgaattttgcattaagctaatgcatatacatttttctaacttaaaacagaatagatttttagacaaattgttagctacctaatagtcctactgtgctctttatttgtcagtggaattgaagttgcgtaccaagaagctgttgctttgaagagacaagaagagttaattcgagaggaggaggaagaggcatggcttcttggaaatgagatgaaggggaagcgtgggggtggtgctaatgaaaaagataagcgtgcaaagaagaaacaggtcatattctttatagaccttagttttattatattgagtatcatattggctcttctatgtgcctcaatagtgaagcagaactatagctagaagcttcataagcgattatcgtacccaatagttattgaacttaaattgcttagcgatttttggagtcagcatttacaacttttgtgatttgatttaattaggttatgcatcacaaaagaaaatatttaatcctatatcttgcagtttcattagggtatattttccacatttccatccttccctgcttctactgccaagttgtggtgagcaattttccatgtagttgatgcttagaaccagcctctgggatgttttatttggtcaaattgcatctgctttctcctggatgctgtttagaaactttctgattgtatgtactctgatttttattttgaagttgatagaaattaaaaacacatgttgagttgtactgcacttggccagggtccaatgcaacctttcataaaactgtccaaactggacagatacttggccagggtccagcgtagcctgtaaggcatccattcttggtcatctcaatttactcaggaactatattctttatagtttcttctatcatggattcgtggttccatattactattgctgcactagcatatttctgttgcgagcttaatatcacgtgctaggattatttgggatgaaacgggtgaaggggaatagattggatcataatagaggaaagaacagggaatggccctgaacctaaacggcacgtcgctctccgttgcaccaagaaggcagggccgatgggcgctaataaatcttgatctaatgcctaactgacctgagataggatccctccttatatagatggaggactccttaacccaatcctaacagaccgtgactctatccaactaagctacgtacttatattgatggatatcgtttccattgggcctaggactcccggcccaaagcccatgacacttaataataattattggcttttattattctctgattttactgctgttgtgcgaccctagcatcgggtttcccttgtgacattccaaatgaaaaatgttattagctcctagtcctgagtaacattgaattatcttctgaagtcttgtgctagtgccattctcgaagaacagctcttattctggggttgaaaatatatttgggtgaacatttaatattagtgtgaattgctcaggtacaactgatgtgaagttttatggttttgaagacctcaacctactttatttagggtcactacatagcttcatttcatcatgtcagttgtgttctatttctataattttatatgcattttgatccttagctctccttaatagtttgatgcgatgtttctttctcttgtatcatcttgttttttccactaatgctgaatcattcttttcaggccaaacaaaagaagaacaatcgtaagattaaagacaaggaaagagacgaaaaatttgaagcaaagattctggaaagacttcatgatgaaactgcgattgatgatagtgatggcttatcatcaaagcaggccgaagaagtgacaacaaaggttgaaaacttggaagaaggtgcttcagataggcaaggtgatctagatagttcagaaattgctcaccgaccagactcaggtgacaagtatcctagacaaatgaatggactgagtgatgttactggcaatgcacaaaaggtaaagaaggcctcctctatggaggctaactcaccagtctttctggctgattctgttgctgcaagcggcactcatagcagaggaaataatttgtcagacagtaagaaccgcatgacaccaaataggtaggtgaactctagtttctaaggcttgcattgtgatgctagtaaaattggcatctgctctaactggaactatctgcagagggaaaaatcagcgtaacaagggcataagcattatcagcttttctgaggaaggtgagggtattccctcgagttctactggtggttcggctcgttgtagttctagttgcggcacatctgcaaagttggaccaagataccgttctactcaccttgaaggataaactccgtaagctggggcaacgtctacatgaggtgatacatcttcttgaaaagttaactgcctttgttttgttgtgatatgtgaagtccagctgctctgttttggtcatatgcacgaccttccacggattatattatgagcattgtttttaaatgggatgagtgtcacatatgttgattgtatggaatatttgttttcgacccattacccttgtgcaattcatatttaaaatttattacaaaaggtaaacaatataagtatgtcttccatatttcatgcctatggctaatgactggagtctatgaattttaatctcaattttttcgtcagactaaacagctcttccattttctttttattaatggatataacttgctttaatctgtgtgtttcagaaaaatatggaggggcgaaaacttctccaagctcattttgaagccatggaagcaaagacgagtggttcatctccctcatccagtcctttggatgaaacacctgatgttgtgaagagccctgagcagtctgcagaaggtacaacagatgcaaaagctaatggaacaccaaataaggatgaacccgtgacaaattgcgtggcagaggaatctgtttcagtcatgccaggcacaaagagtactgaagctttatctggcatggcccttgccaagacaaaagttgagccagtttcaaataaagatcatgttccaaaaccaacattgcaagccaatagagcatctgct</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062532.1 RefSeq:Os05g0508700]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 08:34, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information