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| − | {{JaponicaGene|
| + | The rice '''''Os05g0515700''''' was reported as '''''OsVOZ2''''' in 2013 <ref name="ref1" /> by researchers from Korea. |
| − | GeneName = Os05g0515700|
| |
| − | Description = Colicin E3, catalytic domain containing protein|
| |
| − | Version = NM_001062576.1 GI:115464882 GeneID:4339316|
| |
| − | Length = 4101 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0515700, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | [[File:23-Os05g0515700.png|right|thumb|427px|'''Figure 3.''' ''Localization of OsVOZ2 in plant cells.<ref name="ref1" />.'']] |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | ===Gene Symbol=== |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | *'''''Os05g0515700''''' '''<=>''' '''''OsVOZ2,VOZ2''''' |
| − | |
| + | |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| + | ===Function=== |
| − | AP = Chromosome 5:25636874..25640974|
| + | * '''''OsVOZ2''''' plays important roles for Xoo virulence in rice. |
| − | CDS = 25636978..25637241,25637329..25637742,25639269..25639794,25639886..25640607|
| + | |
| − | GCID = <gbrowseImage1>
| + | ===Subcellular localization=== |
| − | name=NC_008398:25636874..25640974
| + | * To determine the subcellular localizations, '''''OsVOZ2''''' was tagged with GFP at their C-termini in p2GWF7-OsVOZ2. |
| − | source=RiceChromosome05
| + | * GFP signals from OsVOZ2-GFP was detected in both the cytoplasm and the nucleus, indicating that '''''OsVOZ2''''' is localized in a nuclear and cytoplasm. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | You can also add sub-section(s) at will. |
| − | GSID = <gbrowseImage2>
| + | |
| − | name=NC_008398:25636874..25640974
| + | ==Labs working on this gene== |
| − | source=RiceChromosome05
| + | * Department of Agricultural Biotechnology, Seoul National University, Seoul, Korea |
| − | preset=GeneLocation
| + | * Graduate School of Biotechnology & Crop Biotech Institute, Kyung Hee University, Yongin, Korea |
| − | </gbrowseImage2>| | + | * National Academy of Agricultural Science, Rural Development Administration, Suwon, Korea |
| − | CDNA = <cdnaseq>atggccggcgatccggccgccggcggcgacggcggccgtggctcctcaggcggcaagggctcgtccccctcctcctcgcggcaccagcagttccgcaacctcgccaagacccgcgtcgacgacctccaggagatgttctccggcctccagtccgcccgcaaggagagccgctccgccgacgccgccctcctcgaggagcaggtccaccacatgctccgggagtggcgcgccgagctcaacgtcccctcccccgcctcctccctccagaactctcagtcgcagggtaacaaccgggaggcgtcggatccgccatcggagacgctgcggttgctgcagctggccggggccgaggaggaggatgacgccaccagcaagctcgtgatgccgcgatcgcctatgccgatgcaatcttctcatgagggccataatctcagccccgtgctacagggggggactatggcggggggagccgctgagctgatggttccccgatcgccgctgcagcaaatgccatcttctcatcagagccatgggcatgggcaggatggcggccagaatctgcagggtgaggctgtcatgggaagtactgctgctactgctgccccgcatctgggtcagggaatgcagggcgattgcggaggaatggctggtgttaccaatgcaatgttccatgatcagctgtactatatagatcatgaactcaacattgatgattttcttcaagatgatgattataagataaatcttcctggctcaaacccagacggccccaataccatgcaggggattggtcagctggaacatcaacagtacaacctgccattagatctgccacctaactcatttgttgatgcaaataactctgcgcagagttctggagatgtttttttccacatgtcagacttgctcacaacaatgtgcccatcaccttctcaatatttggggccaaaatgtgcactctgggactgcggtcgacctgttcgaggatcagatgagtgtcaacattactgcaatccttaccatgccggtttagctttgaatgatgatggccttctagggactagacctgtgatgcgtccaagggggattgatttgaaagatggccctctgtttgctgctcttagtgcaaaagtccaaggaaaaaatgttggtattcctgtgtgtgaaggggctgcaactacaaaatctccttggaatgcacctgagcttttcgatctatctcttcttgaaggtgaatctcttagagaatggctattctttgacacaccaagacgggcatttgatagcggcaatcggaagcaaaggtcattgccagattacaatggccgtggatggcatgaatcaaggaagcaagtgatgaaagattttggaggtctgaagaggtcctattacatggatccacaaccatccagcaactatgagtggcatctttttgaatatgaaaccaatgattctgatgctctagcgctgtatcggcttgagtacaagtcttctgatactaagaggagtgttaaatcaaaattggcaagcagtccactgagtgaaatacagcagcaaatggtcaggcttagtgcagacagtcctgtggaaagcaaacggactgctaggagcagggcaaaggctaatcaaaaggataacaattcaaacgcctatccagctctcaatacccctgttcaagtcagtgcttcaaatgctcatcaaacaatgtctgtcaacacccctgatcaggtcaatgtttcaaatgcatatcaaacaatgcctctcaacaccccaaatcaacccggtccttctaatgcttatcatgcagcatcacagatggaccagatgacgtttctggatggcagtgttgtttatggacctcatcttccatatggatactccaccgaaagaagcgatttctactggaaccctagtgacgggacatga</cdnaseq>|
| + | * Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Korea |
| − | AA = <aaseq>MAGDPAAGGDGGRGSSGGKGSSPSSSRHQQFRNLAKTRVDDLQE MFSGLQSARKESRSADAALLEEQVHHMLREWRAELNVPSPASSLQNSQSQGNNREASD PPSETLRLLQLAGAEEEDDATSKLVMPRSPMPMQSSHEGHNLSPVLQGGTMAGGAAEL MVPRSPLQQMPSSHQSHGHGQDGGQNLQGEAVMGSTAATAAPHLGQGMQGDCGGMAGV TNAMFHDQLYYIDHELNIDDFLQDDDYKINLPGSNPDGPNTMQGIGQLEHQQYNLPLD LPPNSFVDANNSAQSSGDVFFHMSDLLTTMCPSPSQYLGPKCALWDCGRPVRGSDECQ HYCNPYHAGLALNDDGLLGTRPVMRPRGIDLKDGPLFAALSAKVQGKNVGIPVCEGAA TTKSPWNAPELFDLSLLEGESLREWLFFDTPRRAFDSGNRKQRSLPDYNGRGWHESRK QVMKDFGGLKRSYYMDPQPSSNYEWHLFEYETNDSDALALYRLEYKSSDTKRSVKSKL ASSPLSEIQQQMVRLSADSPVESKRTARSRAKANQKDNNSNAYPALNTPVQVSASNAH QTMSVNTPDQVNVSNAYQTMPLNTPNQPGPSNAYHAASQMDQMTFLDGSVVYGPHLPY GYSTERSDFYWNPSDGT</aaseq>|
| + | ==References== |
| − | DNA = <dnaseqindica>105..368#456..869#2396..2921#3013..3734#aggactttgctcaccaaatttcgtcaaccgaaggagagtcctcttcttcgcccaccaaaccccattccaatcacaccgccgccgccgccactttgatcggcaggatggccggcgatccggccgccggcggcgacggcggccgtggctcctcaggcggcaagggctcgtccccctcctcctcgcggcaccagcagttccgcaacctcgccaagacccgcgtcgacgacctccaggagatgttctccggcctccagtccgcccgcaaggagagccgctccgccgacgccgccctcctcgaggagcaggtccaccacatgctccgggagtggcgcgccgagctcaacgtcccctcccccgcctcctccctccaggcaatccccccaaaccctagcttccccccttcctcctttacttgtgcagtagattgatgctgactccgaactgttgcgccgccgcagaactctcagtcgcagggtaacaaccgggaggcgtcggatccgccatcggagacgctgcggttgctgcagctggccggggccgaggaggaggatgacgccaccagcaagctcgtgatgccgcgatcgcctatgccgatgcaatcttctcatgagggccataatctcagccccgtgctacagggggggactatggcggggggagccgctgagctgatggttccccgatcgccgctgcagcaaatgccatcttctcatcagagccatgggcatgggcaggatggcggccagaatctgcagggtgaggctgtcatgggaagtactgctgctactgctgccccgcatctgggtcagggaatgcagggcgattgcggaggaatggctggtgttaccaatgcaatgttccatgatcaggtattggattttaacaggtcttcttttcatttcatcgatgagtggaaattgtttgattctgtgatattgatcgtgttagggagcttataggcaaggctattctgtcagtgagaggtttactttgtgttgtttgtggagttcacctttatgagcttgctcaatcgttcgctaatactgtcagatgcttcatgcaatccttcgcaatattgtagttttgttgaggcaatttaaactagcagaatggttcattgtgctttgttatccttgttgcattttaggcttgggcattcagccaagcaggacacacttttttactacatacagcgtttttctgcaactgccaactattccttagtattccccagaagaagttaattgctattttatatgtaaggtatgaaaatgcatcttttagcagaacaatccattcgatttgaaccattaactctatttgcaaataacagaattgcttttccgaggcttggactatttacaattcatttttccttttcaatatatttctcccaaaattgtaatatagcatgtgccaattttggatgtaagtttatgtatgcaaactaacttcattctgctttagatgagattattagatctggcaatgacctctattagtgtgttatttgtctagtcttgggaggagcacaagccaccagtcacaactcgacagtgtctttttttgtgtacttcttgatttaacttggatgtccaatgcttgagtgctgtacttaagtatgctagcttcagcaaatctactgttcaatgatgagtaatgtgttagtgtgttgtgttatttgtgtagctttctgaggagcacaagtccacaaagtttaacttgttccatggttaacgtaagtgtaagtaggaactaataatggcctcctgaagatgcatgttgaggcagcgtgatataccttgctccagtgaaaccaaatttccaaaatttgttttatttgctaaatgtctttctgaatttctgatccaaattggtcggtgttcaaattttagttttgttagggtgttctcattagatgatggatgaaactgagtttacaacaattattcgagggaaaaaaacaaatgaataaatattagaaagttgacaagctgattttaaaaagtttccttagaaatgctgatgaagaaagtttctgcaaaaattgtaccatttaggagcttgggaagcatggccacaataatccataatccgtaagctactgagaatgcacctaaaatgtttcttctttaccacctaatgaagacatatgtgtttcaggatatctttttgatgcagctacgctttgtttgttttgtgtgccttcgagcatgcaaattgtgaatctcacaatgtgctggtcagtatatgcatgcatgctatctgttatctgtatataatatttcatctgtttggtggttgtaacctgcacgtcctgttagtgttcatgttggttttgttttttccctgctgactgctttttgggctaagtctatgttccctttgattgcagctgtactatatagatcatgaactcaacattgatgattttcttcaagatgatgattataagataaatcttcctggctcaaacccagacggccccaataccatgcaggggattggtcagctggaacatcaacagtacaacctgccattagatctgccacctaactcatttgttgatgcaaataactctgcgcagagttctggagatgtttttttccacatgtcagacttgctcacaacaatgtgcccatcaccttctcaatatttggggccaaaatgtgcactctgggactgcggtcgacctgttcgaggatcagatgagtgtcaacattactgcaatccttaccatgccggtttagctttgaatgatgatggccttctagggactagacctgtgatgcgtccaagggggattgatttgaaagatggccctctgtttgctgctcttagtgcaaaagtccaaggaaaaaatgttggtattcctgtgtgtgaaggggctgcaactacaaaatctccttggaatgcacctggtaagtttggccatgttacttttatcccgttgttgaatagttatatcagcatattattgtgctaattattgttttcattctgttctggcagagcttttcgatctatctcttcttgaaggtgaatctcttagagaatggctattctttgacacaccaagacgggcatttgatagcggcaatcggaagcaaaggtcattgccagattacaatggccgtggatggcatgaatcaaggaagcaagtgatgaaagattttggaggtctgaagaggtcctattacatggatccacaaccatccagcaactatgagtggcatctttttgaatatgaaaccaatgattctgatgctctagcgctgtatcggcttgagtacaagtcttctgatactaagaggagtgttaaatcaaaattggcaagcagtccactgagtgaaatacagcagcaaatggtcaggcttagtgcagacagtcctgtggaaagcaaacggactgctaggagcagggcaaaggctaatcaaaaggataacaattcaaacgcctatccagctctcaatacccctgttcaagtcagtgcttcaaatgctcatcaaacaatgtctgtcaacacccctgatcaggtcaatgtttcaaatgcatatcaaacaatgcctctcaacaccccaaatcaacccggtccttctaatgcttatcatgcagcatcacagatggaccagatgacgtttctggatggcagtgttgtttatggacctcatcttccatatggatactccaccgaaagaagcgatttctactggaaccctagtgacgggacatgaagatagcatattgggtttcatacattctactgcatctgtcagctgggaattttaacagcatcagctaaattatggggctcaacagtgtggcccaaaagttttctgattgtatgacctcttttaaagatggcatgtttgcaatacagtgctatactttgcattaacacttgactgtaaaaatatatcccagcacgccctagctcctgttgatggcaagttaaatggtcaaatggcttttaccaggaaccaatgctgctgtgctgggtgtatttttagcttagcctgaagccttatgaagttctgaacttctgaaggtttcgttttatcctttgtatataccctgattttctgaggcgttgtggcatcc</dnaseqindica>|
| + | <references> |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062576.1 RefSeq:Os05g0515700]|
| + | * <ref name="ref1"> |
| − | }}
| + | Cheong H, Kim CY, Jeon JS, Lee BM, Sun Moon J, Hwang I. Xanthomonas oryzae pv. |
| − | [[Category:Genes]] | + | oryzae type III effector XopN targets OsVOZ2 and a putative thiamine synthase as |
| − | [[Category:Japonica mRNA]]
| + | a virulence factor in rice. PLoS One. 2013 Sep 3;8(9):e73346. doi: |
| − | [[Category:Oryza Sativa Japonica Group]] | + | 10.1371/journal.pone.0073346. eCollection 2013. PubMed PMID: 24019919; |
| − | [[Category:Japonica Genes]] | + | </ref> |
| − | [[Category:Japonica Chromosome 5]]
| + | </references> |
| − | [[Category:Chromosome 5]]
| + | |
| | + | ==Structured Information== |
| | + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
