Difference between revisions of "Os05g0542800"

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(Created page with "{{JaponicaGene| GeneName = Os05g0542800| Description = Virulence factor, pectin lyase fold family protein| Version = NM_001062733.1 GI:115465196 GeneID:4339483| Length = 2...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os05g0542800|
 
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Description = Virulence factor, pectin lyase fold family protein|
 
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Version = NM_001062733.1 GI:115465196 GeneID:4339483|
 
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Length = 2847 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0542800, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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Please input expression information here.
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AP = Chromosome 5:27001561..27004407|
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CDS = 27001733..27001888,27001974..27002105,27002205..27002375,27002453..27002479,27002584..27002791<br>,27003194..27003275,27003418..27003526,27003674..27003790,27003916..27004058<br>,27004113..27004194|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008398:27001561..27004407
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source=RiceChromosome05
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008398:27001561..27004407
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source=RiceChromosome05
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggcgattcttcgtgtgtccgtgatgcggctggttgttgcggccatggctgttgcagctggtgttctcttcttctccggcgccggcgaggcgcgcgtgctcctcaccctcgacgacttcggcgccgtcggcgacggcattaccaacgacacgcaggccttcttggacgcctggaacgccgcctgcgcctcgacggagccggccgtcctcgccgtgccggccgggaagacgtaccagatctggccggtgcggctcgccgggccctgcaagaagaagctcaagctcatgatttccgggacgatcgcggcgccggcgagccccgacgagtgggcggggcgcgacccgacgaagtggctctacgtcttccgcgtcgacgacctgtccgtctccggcggcggcaccatcgacggcatgggcgccgagtggtgggcgcgctcctgcaagcgcaagaagaccaagccttgcagcacggtgtctgctcccaaggcgctgcagttcgaggagtgcaggcgggtgagcgtgcaggggatcacgatgcagaacgggccgcagttccacctgatgttcacccggtgcacggacgtcaaggcaagcttcctccgcgtcgtggcgccggagagcagcccgaacaccgacgggatccacctcaacgacaccacccatgcccagatcatggacaacctcatctccacaggagatgattgcgtgtcaatggttggcaattgctctgacgtccgagtgaaggacatatcatgtgggcctggacatggcatcagtatcggaagcttaggcaagaaccggaccactgacagaatagagaacgtgagggtggacacctgcttgctgacaaacacaaccaacggtgtacggatcaagagttggcagggagggatggggtatgctcacaacctgaggttcgagggcatcgtgatgaagaacgtctccaatccaatcatcatcgatcagtactactgtgaccaaccaacaccctgtgcaaaccagacgcaggcggtggaggtgcgcaagatcgagttcgcgggcatccggggcacgtcggcgacggagcaggcgatcaagctggcgtgcagcgacgccgtgccgtgccgggatctggagctgaggaacgtcaacctgaccatggtgggcgtcgtgccggcgtcctgcctcgccaaggcgccccacaggatgctcggcgacgccacgccggcggccagagtcggttcttga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MAILRVSVMRLVVAAMAVAAGVLFFSGAGEARVLLTLDDFGAVG                    DGITNDTQAFLDAWNAACASTEPAVLAVPAGKTYQIWPVRLAGPCKKKLKLMISGTIA                    APASPDEWAGRDPTKWLYVFRVDDLSVSGGGTIDGMGAEWWARSCKRKKTKPCSTVSA                    PKALQFEECRRVSVQGITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTDGIHLND                    TTHAQIMDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRIENVR                    VDTCLLTNTTNGVRIKSWQGGMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQ                    TQAVEVRKIEFAGIRGTSATEQAIKLACSDAVPCRDLELRNVNLTMVGVVPASCLAKA                    PHRMLGDATPAARVGS</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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DNA = <dnaseqindica>173..328#414..545#645..815#893..919#1024..1231#1634..1715#1858..1966#2114..2230#2356..2498#2553..2634#attcaaccgcaaaagcaacctagttagtacaaggcagcacatgcgctgctattagtagcagctgctaggtgtcctgctattttgttgccctgcttcctctaatcttcctcttcttcttctccttcaatcgtgtcgtgtcgtctccttgttcggttctttggtgcaggaagcaatggcgattcttcgtgtgtccgtgatgcggctggttgttgcggccatggctgttgcagctggtgttctcttcttctccggcgccggcgaggcgcgcgtgctcctcaccctcgacgacttcggcgccgtcggcgacggcattaccaacgacacgcaggtgaggtgttcgagctcggtgcaatttttttttttggtcggcgagaactctggcacgacggtgcactctgtcttttcgtgtctaggccttcttggacgcctggaacgccgcctgcgcctcgacggagccggccgtcctcgccgtgccggccgggaagacgtaccagatctggccggtgcggctcgccgggccctgcaagaagaagctcaagctcatggtacgtacgtgcttgccccgtgtcgcgccgcgcgccggcggcggcggcggcgttcgtctgttcgattcgatgacgcgagctgcattgtgtttgtgacagatttccgggacgatcgcggcgccggcgagccccgacgagtgggcggggcgcgacccgacgaagtggctctacgtcttccgcgtcgacgacctgtccgtctccggcggcggcaccatcgacggcatgggcgccgagtggtgggcgcgctcctgcaagcgcaagaagaccaaggtaacaacaacaaccaattcgccattgttaaccatcaaagcatcatctgaacgtttgctcttcttgcgttcttgcagccttgcagcacggtgtctgctcccaaggtgagcgagagcgaacgctcctccattccggccgccggagtacggtcgccggcggcgaccgtgactgattcttctctctgcgattgcattgcattgaattgcaggcgctgcagttcgaggagtgcaggcgggtgagcgtgcaggggatcacgatgcagaacgggccgcagttccacctgatgttcacccggtgcacggacgtcaaggcaagcttcctccgcgtcgtggcgccggagagcagcccgaacaccgacgggatccacctcaacgacaccacccatgcccagatcatggacaacctcatctccacaggtcagtgtgctgtgcatgccaatgccatgacaaaattcggaatgtacttgcttgcaagcttggactaatcttcagtttcagatgctgactttctgagacagtgtgtcagtgtctctcctacttctggtcaaactaattcagctatctgattccatttttcgcattttgttattcaagataagatcaaatccgccaagtcggcgcccaaaatcgaataattgacctggaaaaggaatacttgaaagttgttaaattaatgtagttgattgataagagatcaggtcatacattgctgctcttggtcagaatcttgggcttcctttgaagtttgaagcaggcagtgattaccgctgatatttggatgattggttaattaatctgctgtttaatcactttcttcaggagatgattgcgtgtcaatggttggcaattgctctgacgtccgagtgaaggacatatcatgtgggcctggacatggcatcaggttgcagtactttccaggattccatgccagtctttgcccatgatctctgatcagtataacaatagatttttctgtttctaaagaggattctgttactggaactgccaatgtcactgacacgtggcacttgtttgattgacagtatcggaagcttaggcaagaaccggaccactgacagaatagagaacgtgagggtggacacctgcttgctgacaaacacaaccaacggtgtacggatcaagagttggcaggttagttgcaggacatcacacttctgaattctcacaagaacaatctgatgaggggaaaaaacacttgcagttcttggttctgacaagaacaatctattcagaaaaaggagtaattatatgacaaaatgcaactttgtgcttgatcagggagggatggggtatgctcacaacctgaggttcgagggcatcgtgatgaagaacgtctccaatccaatcatcatcgatcagtactactgtgaccaaccaacaccctgtgcaaaccaggtaataatctgcattttcacctgcaaagcatcgtatcatctctgaaactctgaacttttgccattgttcagagcactagttcatcatctctgaaacttgggaatttttcgtctctgtggatgcagacgcaggcggtggaggtgcgcaagatcgagttcgcgggcatccggggcacgtcggcgacggagcaggcgatcaagctggcgtgcagcgacgccgtgccgtgccgggatctggagctgaggaacgtcaacctgaccatggtgggcggcggcgcggcgtcggcgttctgccacagggcgtccgggaaggcggccggcgccgtcgtgccggcgtcctgcctcgccaaggcgccccacaggatgctcggcgacgccacgccggcggccagagtcggttcttgatcgccgccggcaatgcccgatcctggcaacgatcaccggaaaaaagctgaagtataaataccgtacacgtaggtgtagaaactgttgccgtatttgggagagtgtatgagtacagagagttgtaagctgtatacgacgtttgtgtcaagaattttttagagggcattatgtgaagttaaaatggatacaaaaaaacataattttaccggagtt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062733.1 RefSeq:Os05g0542800]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 08:37, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information