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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]] |
| − | GeneName = Os11g0598900|
| |
| − | Description = Tetratricopeptide-like helical domain containing protein|
| |
| − | Version = NM_001074750.1 GI:115486148 GeneID:4350853|
| |
| − | Length = 7117 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os11g0598900, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
| |
| − | AP = Chromosome 11:24729942..24737058|
| |
| − | CDS = 24729942..24731522,24731605..24731712,24731805..24731945,24732151..24732200,24732675..24732743<br>,24733224..24733356,24734209..24734322,24734401..24734613,24734962..24735075<br>,24735343..24735475,24735879..24735991,24736779..24736859,24736972..24737058<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008404:24729942..24737058
| |
| − | source=RiceChromosome11
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008404:24729942..24737058
| |
| − | source=RiceChromosome11
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggccaacgacggcaaggacgtgaggaaggtggctagggcggtgctgatgcgggactacgacggggaccacgggggggcgctggagcgcgccgggaagctcgcgcgcgaccaccccgggtcggcgatcgcgctccggctcgtcggggacctcaaccacgccgcggcgatcagggtgcggaaggtgatcgagatcggtgggagtctgggccgcgccgcggagcgggacgcgagcgcgcacctcgcggcggcacgcgacgcgctctccgaggcaaggcggctcgtccccgactgcgtcggcatcgccaccgcgctcggcgacgtgctcgtcggctcctccatggccgaaaaagcggagcaagcgtacacctcggcgctggccatcccactccccgtcgacccggcgctgcacaacgcggcgtactgcctccacggccgggaccgcaccaccgtgaacgcgagggtgaaggatgccagggagaaggccaacctcgcctacggccgcttcaagaagaaggtggtcgatgagtgggtggccgagatgctccaattccttcgcggcgatctcctccggaagaacccgcgcgcgtcggcgaaggagatcctcaaggcgcagcgcgacgcgatggtggaggcgcgcaagaaggcgaagagcatggtcgacgctatgccgaactcggcccgcgcgcagtgcttccacggcctcatggacctcaatttcgtgtacctcctcgacgaggccatcgacaagcggagcgccctgcggcggagcaccctggccatcttggaccgcgccgcggagaggttccccaaatcgttggtgatcgcctccttccgcgccaagctcctgtacatcctgggcgactacgacgccgcggagcgcgactgccggcgagggtacaccatgaagaatcccgatgacccagcggatgattgcatcccacctggttccataggcggggagaacaagggcgacaggctgattactcatgtcagcgagttccatgagctgatcaacaagatcgtgaggacggccaatttgtactggaattccatgacacaagagcaaaggggcgagttcctaagcgtgaggttcgatgaactacaagaagactacaacaaggttgatcgatcttcgttcaccatgtcggatgtgctgagatttggggagaaacacaattcttacaggttctgggtttgtcccttgtgtggtagtggtagcagtagcaagaagcatacagacaccgtctcgctgttgtcacacatgtgcagcaagcaccaaagggcagtattgccgaggctgcggtcagttctagatcaagagctggatcgcagtgcatttgaagatgatgagtactctttcaacaaggtgattttctctcaagattctgatcagcgcaacattgtctgcttcgaagagagagatcagatgttcaaatggctgtttgataaaccctcaagtggagtacgaacactggcgctcactgaattaatagaaacaaaacgcaggacaggagctttgctccttgacaatatcaaggagaagttgaagactttggctacagataaatctagtactgagttcgccgaggctcttccaggaatccaggaatcgtggattaaatttgttaaagaaactgctgtggattatagagcactcatcttggcgattggaagatcattgttatggagaaaattaaagaaatgcatgtctgaggacccagaagtaggtgctaggaggattagtgctgctgatattgatgaagtgtttgttattgttgcttataattctggtagcagtgctgttgaagacaagacagaagctcacatgtcttcacactcagatgcagctcaaaagatgaatgggaatcatcaagaaagtatggtcaagatccatgtggctaatctattaactggaaagaaaagatttatacttctttatttgagtagtgactttcatgctgaaaatagaagttctgggaccattgtcgacatgaaaccacaagatccgccaaccaacatggaaggaaatggaaataagctagatgaacagatggaaaaactggatattgatccaaattctgatcttctagccaattttcagatgaatcagcacaaatttccatctatcaaaaagagtgttgatgttctcaaccaaaacagtgaagacatatttttcttgcatttgatcatacagacaatgtggaatttgaggcctttcagggatgattttttaaagaggccacctgccagtttccagttaagacataatggctcctgcttttctgatatattctatgacatcttctctgcttgggagaaaaatgatcaccacgaaacatactattcactgacttctctgaagaacaatttgtgccaaactgtaaatgttagaaatatatttgaaaagctgcgggctggaaaatattttgcttctgtgattttggatttagttctcgacgaactgcacgtgtcagaagctcctttgcatttctatttcaacaacaagattcagggacaagtaatcaagtcctttgcagatcttccagttgcaattgatgaacggttttggtacctgcaggacgaatgccagtcttgtggaaatctgaagagtgttggccactttcttttgaatacaccgcacttctttacagtagttttgaaatgcacggatagtagcaaaagccatgtcagcctgtctgaacttctagttggctgcacatctccccctgatattacactcgcaactaagtatactctggcctcaatgatctgctgttctgacgggcagtatgtctgtatttctcgggaccaaaacaaatggctcatatatgacaccaagactatcgaggcagaagattcctgggagcgtttggtacagcgttttacagatagcgagctcatacctgaagtcatcatcttcgaggtcatcaagtag</cdnaseq>|
| |
| − | AA = <aaseq>MANDGKDVRKVARAVLMRDYDGDHGGALERAGKLARDHPGSAIA LRLVGDLNHAAAIRVRKVIEIGGSLGRAAERDASAHLAAARDALSEARRLVPDCVGIA TALGDVLVGSSMAEKAEQAYTSALAIPLPVDPALHNAAYCLHGRDRTTVNARVKDARE KANLAYGRFKKKVVDEWVAEMLQFLRGDLLRKNPRASAKEILKAQRDAMVEARKKAKS MVDAMPNSARAQCFHGLMDLNFVYLLDEAIDKRSALRRSTLAILDRAAERFPKSLVIA SFRAKLLYILGDYDAAERDCRRGYTMKNPDDPADDCIPPGSIGGENKGDRLITHVSEF HELINKIVRTANLYWNSMTQEQRGEFLSVRFDELQEDYNKVDRSSFTMSDVLRFGEKH NSYRFWVCPLCGSGSSSKKHTDTVSLLSHMCSKHQRAVLPRLRSVLDQELDRSAFEDD EYSFNKVIFSQDSDQRNIVCFEERDQMFKWLFDKPSSGVRTLALTELIETKRRTGALL LDNIKEKLKTLATDKSSTEFAEALPGIQESWIKFVKETAVDYRALILAIGRSLLWRKL KKCMSEDPEVGARRISAADIDEVFVIVAYNSGSSAVEDKTEAHMSSHSDAAQKMNGNH QESMVKIHVANLLTGKKRFILLYLSSDFHAENRSSGTIVDMKPQDPPTNMEGNGNKLD EQMEKLDIDPNSDLLANFQMNQHKFPSIKKSVDVLNQNSEDIFFLHLIIQTMWNLRPF RDDFLKRPPASFQLRHNGSCFSDIFYDIFSAWEKNDHHETYYSLTSLKNNLCQTVNVR NIFEKLRAGKYFASVILDLVLDELHVSEAPLHFYFNNKIQGQVIKSFADLPVAIDERF WYLQDECQSCGNLKSVGHFLLNTPHFFTVVLKCTDSSKSHVSLSELLVGCTSPPDITL ATKYTLASMICCSDGQYVCISRDQNKWLIYDTKTIEAEDSWERLVQRFTDSELIPEVI IFEVIK</aaseq>|
| |
| − | DNA = <dnaseqindica>1..1581#1664..1771#1864..2004#2210..2259#2734..2802#3283..3415#4268..4381#4460..4672#5021..5134#5402..5534#5938..6050#6838..6918#7031..7117#atggccaacgacggcaaggacgtgaggaaggtggctagggcggtgctgatgcgggactacgacggggaccacgggggggcgctggagcgcgccgggaagctcgcgcgcgaccaccccgggtcggcgatcgcgctccggctcgtcggggacctcaaccacgccgcggcgatcagggtgcggaaggtgatcgagatcggtgggagtctgggccgcgccgcggagcgggacgcgagcgcgcacctcgcggcggcacgcgacgcgctctccgaggcaaggcggctcgtccccgactgcgtcggcatcgccaccgcgctcggcgacgtgctcgtcggctcctccatggccgaaaaagcggagcaagcgtacacctcggcgctggccatcccactccccgtcgacccggcgctgcacaacgcggcgtactgcctccacggccgggaccgcaccaccgtgaacgcgagggtgaaggatgccagggagaaggccaacctcgcctacggccgcttcaagaagaaggtggtcgatgagtgggtggccgagatgctccaattccttcgcggcgatctcctccggaagaacccgcgcgcgtcggcgaaggagatcctcaaggcgcagcgcgacgcgatggtggaggcgcgcaagaaggcgaagagcatggtcgacgctatgccgaactcggcccgcgcgcagtgcttccacggcctcatggacctcaatttcgtgtacctcctcgacgaggccatcgacaagcggagcgccctgcggcggagcaccctggccatcttggaccgcgccgcggagaggttccccaaatcgttggtgatcgcctccttccgcgccaagctcctgtacatcctgggcgactacgacgccgcggagcgcgactgccggcgagggtacaccatgaagaatcccgatgacccagcggatgattgcatcccacctggttccataggcggggagaacaagggcgacaggctgattactcatgtcagcgagttccatgagctgatcaacaagatcgtgaggacggccaatttgtactggaattccatgacacaagagcaaaggggcgagttcctaagcgtgaggttcgatgaactacaagaagactacaacaaggttgatcgatcttcgttcaccatgtcggatgtgctgagatttggggagaaacacaattcttacaggttctgggtttgtcccttgtgtggtagtggtagcagtagcaagaagcatacagacaccgtctcgctgttgtcacacatgtgcagcaagcaccaaagggcagtattgccgaggctgcggtcagttctagatcaagagctggatcgcagtgcatttgaagatgatgagtactctttcaacaaggtgattttctctcaagattctgatcagcgcaacattgtctgcttcgaagagagagatcagatgttcaaatggctgtttgataaaccctcaagtggagtacgaacactggcgctcactgaattaatagaaacaaaacgcaggacaggagctttgctccttgacaatatcaaggagaagttgaagactttggctacagataaatctagtactgaggtttgacatttttatatctaaatggatccttttttgctggtattaattttacatgagatcaatttgtttatttgcattgcagttcgccgaggctcttccaggaatccaggaatcgtggattaaatttgttaaagaaactgctgtggattatagagcactcatcttggcgattggaagatcattgttatgggtttgtttatgctgaatttgcttgtttaggttcagttatgcaggtactttctgatagcatgtgatcactgaatattgccatcaccattgcagagaaaattaaagaaatgcatgtctgaggacccagaagtaggtgctaggaggattagtgctgctgatattgatgaagtgtttgttattgttgcttataattctggtagcagtgctgttgaagacaagacagaagctcacatggtttgttttgttcatcttgatattcttctaaaaaatagtagcatttctctgctgaacaattcctaattaatttgtattattggttcattagtatctgccagttaacattagtactagagcgacaaaattctttttcagtcttagtattgtattattagttgattcaacagaaaataaaattactaacacacaaacattctttcagtcttcacactcagatgcagctcaaaagatgaatgggaatcatcaagaaaggtaatattattagtgtatttctattattatttatttcttgacaggactaccctgtcttttttaaggaattatgtatttagctctcattttgttcatgtccagtatctacagaattttctctctttttttcatatatgccgcacttcagtatttttaaactttatttgttcattgattatgtgccaattcatgagtatacgctgtatggaataaacatacattatattgttcaagacttatatactgaggtggcatcattacacatttatcctataatgaaacgtgttgggttgtggtgcctaccgaataatatgaagcccttttagtgttgcactggactttctgaaacattggtgtgataaagggagaaagtacttcttaatatgtaaaactgagatgaaatgataaatcccttcttgtgtccatgtaagcatgagttcatttcagcttctatatactgatttaaatttgtagtatggtcaagatccatgtggctaatctattaactggaaagaaaagatttatacttctttatttgagtaggtaagacaaacaaacaagagtgacattctgaaagggcaaaacagaggcattatttaaaatgaaatggtgtttcctttcaacaatctaaaaaattgtgctgattttatcagaagtaggacacacactctatttaaagcacaaacagctattagatgagtgcatcactatattctgatgacccccttctgtatgaagccttgattactaacaaaagcatattgatactagtacatcactatattctgacatcacattggtgatatctttcttattactaataaaagcatatagatacatgtgaaactgattatcaggagaaataacatcaaaccgtggtcaccaaagttgtttccttttgaaagttttattatagattctagacaatgcacatatatgattccctgaaattttgcatcgttattcctctattatcatttatttcctcggactcttagcttgcaaatttcattattcctgcagtgactttcatgctgaaaatagaagttctgggaccattgtcgacatgaaaccacaagatccgccaaccaacatggaaggaaatggaaataagctagatgaacagatggaaaaactggatattgatccaaattctgtccgatcaagtgcaattcctcagtccagtacaccaaatggaaatggttccccccacatattaggtactgctttttttatttaatcagaatagaagcatggatcatttattgatcttgctttcttggattgcattaattactggtagtaatgctatttagttcatatatcctatcttttgcagataaaatcattgatattgtcatgtgaaaatgactctagcatgcatatgttttttgtgttatataaacacgaaactatatgtaagctaaatgatcctgggaacaacctgaagaaagtcatctctaggaggctgttaaacaaaatcttgtggaactacgtggtgctttaatttggagttcaagtatgggtctgtccatcgttccatatgatctcttgacaggatgttatgcattatatctacgcttggtgcataatatagtgtactttatattggattcagatcttgtaatagggattttaatcttgtcagaccaaatgtaatatgcatccacttgagctctaatgcatgttattttccaagtatagttgtcagatggtgattgaactcttcactgcacctgcagtgcgacatttttcatgatctaacctataccttttctagagatccattttaatgattaacggtatgtgattaattgtttgcacggtacaatagtcacattgcttacaggcacttcctgtgcaaaaggtaatagcgaattatgatgtacctattggtcagtactaaacacaacagaaacttctgtgctgctctaatttttgcaactctattcacttattcagtaacgcggcaaaatatttgttttaacttggaaatctcataaagcaggatcttctagccaattttcagatgaatcagcacaaatttccatctatcaaaaagagtgttgatgttctcaaccaaaacagtgaagacatatttttcttgcatttgatcatacaggtacttgacggttgcagtgtggttatgcgtttttgacatcactagctaataatttcgtttaatttgcatcttgtgcagacaatgtggaatttgaggcctttcagggatgattttttaaagaggccacctgccagtttccagttaagacataatggctcctgcttttctgatatattctatgacatcttctctgcttgggagaaaaatgatcaccacgaaacatactattcactgacttctctgaagaacaatttgtgccaaactgtaaatgttagaaatatatttgaaaaggtatgcttctcatactttcttatcattatgaagatttacagcttcccaaacaatatatggatgtggcaattacattcattcattgtataaagcacctcaaaccttgcatgaaagacttcagttttcttgtctcagaccagaatcaacttttgtttcttgtttcttgtgggcacagttagcatactgttatcatgcatcatttataagtgctgtcaggctttcccttttctttgtttctttccttttatcatatgatgttacttgttcctttatattatgtatgaatgagtgaacctgtgctttcaattgtgtgtgtttacaatcgtaaacctggtgaatcattttcagctgcgggctggaaaatattttgcttctgtgattttggatttagttctcgacgaactgcacgtgtcagaagctcctttgcatttctatttcaacaacaagattcagggacaagtagtaagtccaatcacttgtgaaggctgtatatgccgagcgcatgttctttttgggatgaggttcctggtgcgaacgagctgtaggtgtggagcatgttttgatgaaggaaaatacagtacacttatccataaacttgatgcaggtttacctcaaacaccaaaggtgcatacactgtaaattctcttcctagccaacatggtgtatgtaagcgtgtgtacattctcgcaagtagtaactgttgcagttctctttgtcctttttatgcagatcaagtcctttgcagatcttccagttgcaattgatgaacggttttggtacctgcaggacgaatgccagtcttgtggaaatctgaagagtgttggccactttcttttgaatacaccgcacttctttacagtaggtaagcttgttcgcgtagaataatacggagtacattgctatttaaaattcttgtggtaatcttcctgcctctactagacgacaaaaaaccctgacaacagtacacataaattgactaattagttcaaatcaagccaagaaggcaagaaaaactacagtagttagttttatatgactcgctacccttactgataactgaaatgcataaaaggataaaagagaaatatattcatcaaaaggaaaaggaactgtgaagttgtgtgtgactttccatgcataaagtaactagtagtagtaagttccctttgtgttgtctcaagaatttgctgcaacactcaaccttttctccgttcgaagtcgaactagtttgaatgaaatggttgttttattgtctccttttgcagttttgaaatgcacggatagtagcaaaagccatgtcagcctgtctgaacttctagttggctgcacatctccccctgatattacactcgcaactaagtatactctggcctcaatggtaaatgcacacaaatcttttttattttccaggtttgacttttctgatgaaactagataaacaacctacaatcctgatgtttaagggattcagaaagggaaggagggagggggcattacgagttttttttttaaaaaatattggtttatatgcattttcccgagagatctacatcagtttacaagtttgatgttatttatttcttttctggtatcgttgctcgttaattttgaaaaatgcacaagtatattgactcccagcatacatattggatgatgcttctaatctgagaggtcacaaaaaatacattattatttaatatttgtaaagttggtgtcgttctgaaggctatggaggtttgtttatttttggataatgaattggagcaaggttatgaaagatatttataccgtgttgcaaactttttttttcttttcaaagaaaagggcaggacctctggtctattgcattacagatggaaaataggtttaaaattagaaaatgaaatgagagcaaggacttaagagtaaaagaggtttaaattagaaatgaaatgggagtaacttggttcaatcatgttggacctcctttgttcctcaacctttttggtttctttcctttgttattttctcggtacagaacatgtgtaagcatatcttcttattttacctgcatgctgacttaaaatatctgtattcagttaaatcagaatctaaagtttatccgtaataaccgtgtctggcaaatataatttacgtacgacttatgtatgtatcaaaatctccagatctgctgttctgacgggcagtatgtctgtatttctcgggaccaaaacaaatggctcatatatgacaccaagactatcgaggtaacgaaactgttgaacactgcatccttgattctcaactgctccacatgttatattgtaatctgcttgattttctggaggtatgatctgggttcctgacatatatatgcaggcagaagattcctgggagcgtttggtacagcgttttacagatagcgagctcatacctgaagtcatcatcttcgaggtcatcaagtag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001074750.1 RefSeq:Os11g0598900]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 11]]
| |
| − | [[Category:Chromosome 11]]
| |
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Annotated Information
Function
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Expression
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Structured Information
