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| − | Please input one-sentence summary here.
| + | The rice gene Os11g0687900 was reported as '''''Pik2''''' in 2011<ref name="ref1" /> by researchers from China. |
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| | ==Annotated Information== | | ==Annotated Information== |
| | + | ===Gene Symbol=== |
| | + | *'''''Os11g0687900 <=> Pik2, OsPik2 |
| | + | |
| | ===Function=== | | ===Function=== |
| − | Please input function information here.
| + | * Both '''''Pik-1''''' and '''''Pik-2''''' encode coiled-coil nucleotide binding site leucine-rich repeat (NBS-LRR) proteins, and each shares a very high level of protein identity with corresponding proteins encoded by the '''''Pik-m''''' and '''''Pik-p''''' alleles. |
| − | | + | * A combination of '''''Pik-1''''' and '''''Pik-2''''' is required for the expression of Pik resistance. |
| − | ===Expression===
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| − | Please input expression information here.
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| | | | |
| | + | ===Expression === |
| | + | * Real-time RT-PCR analysis was used to characterize the expression of '''''Pik-1''''' and '''''Pik-2''''' in plants challenged by the Pik-avirulent blast isolate CHL381. Both were constitutively expressed, although at a low level. Following inoculation, the level of transcript for both genes declined further up to 12 h post-inoculation, thereafter increasing marginally to the steady-state level by 72 h post-inoculation. As a similar expression profile was also observed using a mock inoculation, it is possible that both genes were responding to abiotic stress. |
| | ===Evolution=== | | ===Evolution=== |
| − | Please input evolution information here.
| + | [[File:Os11g0687800-1.png|center|thumb|400px|'''Fig. 7 Phylogeny of the Pik family, including rice and sorghum sequences sharing > 30% identity at the peptide level.''' '' <ref name="ref1" />.'']] |
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| | You can also add sub-section(s) at will. | | You can also add sub-section(s) at will. |
| | + | ==Labs working on this gene== |
| | + | *Laboratory of Plant Resistance and Genetics, College of Resources and Environmental Sciences, South China Agricultural University, Guangzhou, 510642, China; |
| | + | *Rice Research Institute, Guangdong Provincial Academy of Agricultural Sciences, Guangzhou, 510640, China |
| | + | ==References== |
| | + | <references> |
| | + | * <ref name="ref1"> |
| | + | Zhai C, Lin F, Dong Z, He X, Yuan B, Zeng X, Wang L, Pan Q. The isolation and |
| | + | characterization of Pik, a rice blast resistance gene which emerged after rice |
| | + | domestication. New Phytol. 2011 Jan;189(1):321-34. doi: |
| | + | 10.1111/j.1469-8137.2010.03462.x. PubMed PMID: 21118257. |
| | | | |
| − | ==Labs working on this gene==
| + | </ref> |
| − | Please input related labs here.
| + | </references> |
| | | | |
| − | ==References==
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| − | Please input cited references here.
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| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]] |
| − | GeneName = Os11g0687900|
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| − | Description = Similar to MLA10|
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| − | Version = NM_001189793.1 GI:297728716 GeneID:9267664|
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| − | Length = 6850 bp|
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| − | Definition = Oryza sativa Japonica Group Os11g0687900, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
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| − | AP = Chromosome 11:29736943..29743792|
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| − | CDS = 29737822..29738546,29743072..29743762|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008404:29736943..29743792
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| − | source=RiceChromosome11
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008404:29736943..29743792
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| − | source=RiceChromosome11
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | CDNA = <cdnaseq>atgaaggagctgacgaaatgggtgacgaacgagacataccaagacggcgtgctgtccgtcctcggtttcggaggggtggggaagacaaccatcgccacggcactgtaccggcaactcggcgatcaatttgaccgccgggcgatggtcacggtgtcccagagctccgacgttgaggccatcttgagaagcatacttgaacaagtcatgccgcagtccaaggatggtcaggagctgcagggtggccacgcctcccagaagaagcttctacatcaggcagtcatcagctacttgcatcctctcatgcccaaggccctccgacgccgaagcagctccaactccaactccgacaactccaagattagagaggggaagctaacgcgtctcccgagagctctcaccctggatcgccagtatgaccacgatccgcaggacggcaacgatgctgccgccggctcatctgagacagtagtaacaacccctgcaacgaaaggcacggccacctccgatgaaaagcctactagtgtcattgctaccatacggggtgccttcaggccctgggatcgccgtcgccacccaccgcaggatgacaaaggtggtagcacctcaggctcagggaaggaggctattaacattcaaacaatgaacaagcccggcgaaaaaaacattcaaaccatgaagcgtgacggtctctcaaaattgctgcaggagcacctaaatcaaaaaaggtatttcctattaattgacgatgtgtggtctgccacaacttgggagcagatcagaaagcacttgcctacagataacctaagctacagaataatagttaccacaaggtttcaagctgttgctaccgcatgtaaaaggaaagaaagtgaccgcattcacaaagtggatgttcttcgcggaaaaaaacccgaaaaactcttcaatgaagtcgagtccgaatccagaatcagcaaagatggtgaacggaaagagatagatgatggtgaacagaaagagagagaaggtcaacagaaagagatagatggtgaacagaaagatatagtgcgtccccgcaggatctgggaaatgtgcagcgggcttccattggccattgtcaccatggctggtcacgtggcctgcaactcagacaaagatgagacacattggcttaatgtctgtaaatctctagttccagagtcgggaagagatatgacacaggagggtgtaaccagaatacttggtcattgctacaatgatatgcctgccgagctgaggacttgctctctgtacctgagtatattcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatggatagctgaaggctttgtcagtgagaagcaggggcagagtgtggaggatgttgcggaggcatgcttctgttggaaatatagtcattaa</cdnaseq>|
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| − | AA = <aaseq>MKELTKWVTNETYQDGVLSVLGFGGVGKTTIATALYRQLGDQFD RRAMVTVSQSSDVEAILRSILEQVMPQSKDGQELQGGHASQKKLLHQAVISYLHPLMP KALRRRSSSNSNSDNSKIREGKLTRLPRALTLDRQYDHDPQDGNDAAAGSSETVVTTP ATKGTATSDEKPTSVIATIRGAFRPWDRRRHPPQDDKGGSTSGSGKEAINIQTMNKPG EKNIQTMKRDGLSKLLQEHLNQKRYFLLIDDVWSATTWEQIRKHLPTDNLSYRIIVTT RFQAVATACKRKESDRIHKVDVLRGKKPEKLFNEVESESRISKDGERKEIDDGEQKER EGQQKEIDGEQKDIVRPRRIWEMCSGLPLAIVTMAGHVACNSDKDETHWLNVCKSLVP ESGRDMTQEGVTRILGHCYNDMPAELRTCSLYLSIFPKGNKISRKRLTRRWIAEGFVS EKQGQSVEDVAEACFCWKYSH</aaseq>|
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| − | DNA = <dnaseqindica>880..1604#6130..6820#agttggatgactagctagataagaaggcttagtggggattcctttacatggcgcgttattagatgtgccaagagctatattgatccagagaccagaatttgagccctgaattcaactacaaaaaacattttggctgttggaaaagaagatcgtgttgattggaattgtaagtagtcctagctagtgctgcgtccagttttgtttcttgatactctctctctacaaaatcataatcccattttatgtgtgtgcgctgtgcaagccgcaggagatcttgagtagatcagggatcagtgtgtacgtgagaagagtcgggcaagcagcaatggagcatgtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactctcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgagctgacgagcatgcaggcgttcatccgcgacctgagcggcacgccggagggcaaaggcgacgagcacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgaggactgcatcgacgacttcgcgcaccgcctctcccacgaccccggcggcgactacctgtgcggcttcgtcgtgtccagggtgtacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaagatgctggcgcagcagatcggcgagcggcgcacgaggtacggcgtcgagaacccccaaaaaagatcgggagatgagaacaaatccggtccagccaccattggatttgatgccgccgagaaccagcacacaaaccttgagagctggtgggagtggaggcctacatgaaggagctgacgaaatgggtgacgaacgagacataccaagacggcgtgctgtccgtcctcggtttcggaggggtggggaagacaaccatcgccacggcactgtaccggcaactcggcgatcaatttgaccgccgggcgatggtcacggtgtcccagagctccgacgttgaggccatcttgagaagcatacttgaacaagtcatgccgcagtccaaggatggtcaggagctgcagggtggccacgcctcccagaagaagcttctacatcaggcagtcatcagctacttgcatcctctcatgcccaaggccctccgacgccgaagcagctccaactccaactccgacaactccaagattagagaggggaagctaacgcgtctcccgagagctctcaccctggatcgccagtatgaccacgatccgcaggacggcaacgatgctgccgccggctcatctgagacagtagtaacaacccctgcaacgaaaggcacggccacctccgatgaaaagcctactagtgtcattgctaccatacggggtgccttcaggccctgggatcgccgtcgccacccaccgcaggatgacaaaggtggtagcacctcaggctcagggaaggaggctattaacattcaaacaatgaacaagcccggcgaaaaaaacattcaaaccatgaagcgtgacggtctctcaaaattgctgcaggagcacctaaatcaaaaaaggtacttcgcctcaaccccttgcttcgtcatgattgatagatatcatatacacctgcattttatggcaaaatatcgaataggctttactgtactcttcagataattaacttggagctagcatgcatatatatctcctatagattaaattcttcagaagaagggcttatgtatgaaaataaagagttcttaacgacataagcttaaatccattagaaattccaaattacacatgccacatgaattgatttatcactagctagttgataatattattggcaacatacatacaaacaaacaaacaaacacacacactcacacacatatttgttaagttatatcctgaatgatatttttactctgctcctgtacgtggactaatattgatttcatccaatacataacttaatatgaaaatataccacatcatcatccactagcaattacaattctaaatcattttaaatctcatgcaatacagacatatcatctacaatttattatattatagagctcaatatacaagtatatgtctaatcatcgtcttcacatcattttaacaatatttcaatatatatcatttctataatatttaacataaattcatccataaattcctcagcaaagtataaggtatcacccactaactactagttactgtccgcttaacctattagaggtaatactatatgattacaaaaaaaggaaatgaacaataaactagcttccgagtgttattgaagaattgttgtttattaataatacatgtaaaatagtatagtctgacttccaatggacacatttgaattacaatttgcaaccatcatatttataccggccagtaattttttaattgtatttagaatatattatcaaaccgggctatatgacaacagttacatttttttttgctacaagtaattcaaatcttcaaatcagctaatttatttctagctacaaaccacagtagatagaatacgaaaatttagatatgcaatttaaaaataacaaaaaattagaattaaacataagtaatattagaagaggagattagagtccatacaagtatacaatttgaaactaattgaaattcagaattaaaaaataaaaaaataaaagtagaagtcaaagtccagatataaatataatttataaataactataattcaaatttaaaaaaaggaatgttgcgagaggtctatagtcatatagaatataattcagaaaaaaatgaaattcagaattaataaaaaagaaatattgaaagatgagtttagagtccatatagaaatacaaccagaaataatgaaaatttgaaattaaaagtagagtttagagttcatatagaaatacaattgaaaataactaaaaattcaaaatttagaaaataagccagattggtagaagagtctatagtacatatagaaatacaatttataaataactgaaattcgaaattaaaaaataaggaatattggaaaagaaattatagagtacatataggaatactccctacgtccaaaaatatgagacctatttctttttgcaccaagaccaaggaacaattaattcattcaccatctgataaaaccaatagatatgcaaccaataacttataaaaatgacttcttaggttccgatcagcaatttaatttagcacatggtggctacaaataggacttagacttttggaaaaaccaaagaatggaataggtctcagacttttcgatggagggagtacaatttataaataactgaaatcagaattaaaaaatattaaaaaagtctagagtccatatatgaatacaatttacaaataacaaaaagtagaaattaaaaataagaaacattgaaagaagagttcaaagtctatatagaaatacaatttacaaataaataaaatttggagttaagaaaaatgaatattgcaagaagagtctagagtccatatagaataatgaaaattcaaaattaaaaaaaaaggaatattgacggaggaatctggattccgtatatgggaataaaatttataaataatgaaagtttgaaattgtaaaaaggaatattgaaagaggagtatagattccatatataggaataaaatttataagtaatgaaaatttaaaatttaaaaaatattaaaagaggagtctagactccatatgaaaagacaatttagaaataactaagattcaaaattaaaaaataattaataattatcacgtatatacaatacaatatgaatatcatatattggttattttgctcaacttagcacataatataaaattatgttgtcattttaatatatttttataataaagaatgaaaatatttaagctattaaatgagaaaaaaatataatgatgctagccgtgtaatacgcactggctccatgctagtttggaattattcaaacaaatattaagcaatgatcgaaacaaccactgaatatatacttaatgctcttcatctaaaacttgttgggtggcctgcgcaattgcgcggctagcacccatacaaaattatatattttttaatataattttacttaaaatttattaaatagctatctcgctgtcttaagccataccttatcatctccgtgtttctaatttatagttttttaaaagtcattccatttgctaccccttatttctaccatctccttctttatttgtttgcttgatctatcattttttctactcattcttcttagaacctttaaaaattggatcgtataattttcagagtttattgtctcgttgggttttcttttcagaatttctagaagtctcgtcaaatgttaccattatacttttgtacgacccatccactgtctcttctctttattctcattcagattttaaaaatcggacataattattatttgggttcatttttttactttatagatgttccgccaaaccgtcaggctttgccactgtactcctctatggctcaccctttcttttttggcattgagactttaaaatcaaacataattatcattgtgtttttttttactttttagaagtcccggacctttaaaaattgggccttgcaatttttagagtttattatctcattgggattcatccgccgcctactcattattgtcattgggattctaaaaatcgatcataactatcgttggaatttatttttacttttttagaagtcctgccaactattgacggctataccactttactcctgtacgacccgaccgctgtctctcctttttatttttattgatattttaaaaattgaatatgattatcattggggtttatttttttactttctagaagtcctgccaaccgccttgaccggctgcttcacggcccgtccgtcatcactccttttaatcgttattaggattctatttggtgttttataatagtttttagatgtcccatcaaccgccaccatcttactactttataggcatgttacttaattaatctcgtcatgtgttttagatggtctttttctttcaatagcctttatttttttctcaccaattttagttatttataaattgaatttctagttgaaatcttctttatatttttctaatttcagaatttattttatttttattttgaattctaattaatatagtattatgttcttttaatattttaattttttattttcaattttagttgttttaaaattgtattcacacttgaactctctttttagtttgtctaatttcgtattttattttattttttattttgaattttaattaatcacgtattggattctaatatggacttttctttcaatattacttattttaattccgaatttcaattaaacttaaattgtattcctacttgaactcttctttatttttttctaattttattttattttattttgattttgaattagtctcgtattgggtttttatatggactcttctttcaatattgtttaactttaattacgaattttagttatttttaaattgtatttctacttgaactcttcttttctttttttttgctaatttcggattttattttatttttattccaaatattaattaatctcgtattgggttcttatatgaactcttctttcaatagtgcttatttttaattttgaatttcaggtatttttaaattgtatttctacttggactatgcttttctttttttccgattaatgtgggaatttctagctcccacagccaacgtggtgtctaatttcaaagttgttttaataatataattgatactactagctaatatctaatgactaaaagacacttgatgtatatttctatctatattacacatgatcactaaatcatttaatttctattatctgaaagaaaaatattacacatgatcacagactatataaaattttgctttattacttgagggctaattaagatttagtgggcacagttgagtcggttagatgtgtaacatgagtaatacctttttaccccgtctgaaaagttttttttttctacattatggttcagactatttttcaattgcaggtatttcctattaattgacgatgtgtggtctgccacaacttgggagcagatcagaaagcacttgcctacagataacctaagctacagaataatagttaccacaaggtttcaagctgttgctaccgcatgtaaaaggaaagaaagtgaccgcattcacaaagtggatgttcttcgcggaaaaaaacccgaaaaactcttcaatgaagtcgagtccgaatccagaatcagcaaagatggtgaacggaaagagatagatgatggtgaacagaaagagagagaaggtcaacagaaagagatagatggtgaacagaaagatatagtgcgtccccgcaggatctgggaaatgtgcagcgggcttccattggccattgtcaccatggctggtcacgtggcctgcaactcagacaaagatgagacacattggcttaatgtctgtaaatctctagttccagagtcgggaagagatatgacacaggagggtgtaaccagaatacttggtcattgctacaatgatatgcctgccgagctgaggacttgctctctgtacctgagtatattcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatggatagctgaaggctttgtcagtgagaagcaggggcagagtgtggaggatgttgcggaggcatgcttctgttggaaatatagtcattaatcggcatattttaatccaaaaggttaaagc</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001189793.1 RefSeq:Os11g0687900]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 11]]
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| − | [[Category:Chromosome 11]]
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