Difference between revisions of "Os05g0556100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0556100| Description = Similar to SDL5A| Version = NM_001062813.1 GI:115465356 GeneID:4339566| Length = 5568 bp| Definition = Oryza sativa...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
{{JaponicaGene|
+
Please input one-sentence summary here.
GeneName = Os05g0556100|
 
Description = Similar to SDL5A|
 
Version = NM_001062813.1 GI:115465356 GeneID:4339566|
 
Length = 5568 bp|
 
Definition = Oryza sativa Japonica Group Os05g0556100, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
|
+
===Expression===
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
+
Please input expression information here.
AP = Chromosome 5:27729674..27735241|
+
 
CDS = 27729962..27730090,27730227..27730366,27730604..27730832,27731137..27731187,27731317..27731542<br>,27732136..27732206,27732372..27732491,27732577..27732771,27732994..27733058<br>,27733138..27733228,27733513..27733574,27733673..27733723,27733982..27734083<br>,27734312..27734416,27734506..27734569,27734929..27735057|
+
===Evolution===
GCID = <gbrowseImage1>
+
Please input evolution information here.
name=NC_008398:27729674..27735241
+
 
source=RiceChromosome05
+
You can also add sub-section(s) at will.
preset=GeneLocation
+
 
</gbrowseImage1>|
+
==Labs working on this gene==
GSID = <gbrowseImage2>
+
Please input related labs here.
name=NC_008398:27729674..27735241
+
 
source=RiceChromosome05
+
==References==
preset=GeneLocation
+
Please input cited references here.
</gbrowseImage2>|
+
 
CDNA = <cdnaseq>atggagaacctgatctcgctcgtcaacaagctgcagcgggcctgcaccgccctcggcgaccacggcgaggagagcgccctccccaccctctgggactcgctgccggccatcgccgtcgtcggaggccagagttcgggtaaatcctcggtgctggagagcgttgttgggaaggatttcctaccaagaggctcaggcattgtcacccgtcgtcccttggtgctgcagcttcataggatcgacggagacagagaatatgcagagttcatgcaccttcccaggaagagattcactgatttcgctcttgtgaggaaggagatagctgatgaaactgacagagaaactggtcgttcaaagcaaatatcatcggtccctattcatttaagcatatattctccaaatgttgtgaacctgactcttatcgatcttcctgggcttactaaagttgctgttgagggtcagcctgacagtattgttcaggacattgaaaacatggttcgctcgttcatagaaaagcccaattgtatcattctggctgtttctccagccaatcaggatcttgcaacttctgatgcaattaagatttcacgggaagttgaccccaaaggtgaaaggacgtttggtgtgcttacaaaaattgatctaatggacaagggcaccgatgctgttgatatattggaaggcagatcataccggctccaacaacaatggattggtgtcgtcaatcgatctcagcaggatatcaacaagaatgtggacatgattgctgctaggcgcagagagcgtgaatatttttcaactacgccagaatacaagcaccttgctcataggatgggatcagaacatttagcaaagagtctctcgaagcatttggagactgttattaagtcaagaatcccagggctccaatctctcattacaaagacaattgccgaactggagacagaacttaatcgacttgggaagcccattgctacagatgctggaggaaagctgtacacgatcatggaaatatgccgcatgtttgatggtatctacaaagaacatctggatggagtgcgtcctggtggtgagaaaatctatcatgtctttgacaatcagtttcctgtagccattaaacggttgcagtttgacaaacaactggcaatggaaaatgtgaaaaagctcataacggaggctgatggataccaacctcatttaatagctccagagcaaggatatcgacggctcatagagtcttgtcttgttagtatcagaggtcctgctgaggcagctgtggatgcggtccatgcgatactcaaggaattagtgcacaaggccatcaatgaaacacatgagctgaagcagttccccactcttcgtgtggaagtaggcaatgcggcttttgagtcattggacagaatgagggatgaaagcaagaaaaacacattaaagcttgttgatatggaatgcagctacttaaccgtagatttcttcaggaaacttccccaggatgttgagaagggtggaaatccaagccactctatttttgatagatataatgattcttatcttagacgaattggaacaacggttctggcatatattaacatggtatgttcaaccttgaggaactctattccgaaatctattgtctactgtcaagtgcgggaggcaaagcgctcactgctcgatcacttctttactgaattgggagcaagagagattaaacaactttctaagcttcttgatgaagaccccgccgtcatggaacggaggactaatcttgcgaagaggctggagctatatcggagtgctcaagcagaaattgatgcggttgcatggtccaaatag</cdnaseq>|
+
==Structured Information==
AA = <aaseq>MENLISLVNKLQRACTALGDHGEESALPTLWDSLPAIAVVGGQS                    SGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHRIDGDREYAEFMHLPRKRFTDFALV                    RKEIADETDRETGRSKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQD                    IENMVRSFIEKPNCIILAVSPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKG                    TDAVDILEGRSYRLQQQWIGVVNRSQQDINKNVDMIAARRREREYFSTTPEYKHLAHR                    MGSEHLAKSLSKHLETVIKSRIPGLQSLITKTIAELETELNRLGKPIATDAGGKLYTI                    MEICRMFDGIYKEHLDGVRPGGEKIYHVFDNQFPVAIKRLQFDKQLAMENVKKLITEA                    DGYQPHLIAPEQGYRRLIESCLVSIRGPAEAAVDAVHAILKELVHKAINETHELKQFP                    TLRVEVGNAAFESLDRMRDESKKNTLKLVDMECSYLTVDFFRKLPQDVEKGGNPSHSI                    FDRYNDSYLRRIGTTVLAYINMVCSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAR                    EIKQLSKLLDEDPAVMERRTNLAKRLELYRSAQAEIDAVAWSK</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
DNA = <dnaseqindica>5152..5280#4876..5015#4410..4638#4055..4105#3700..3925#3036..3106#2751..2870#2471..2665#2184..2248#2014..2104#1668..1729#1519..1569#1159..1260#826..930#673..736#185..313#ggcgcaccaccatacacagcccgaggccgcgcagctctcgaccccgacgcggctcggcagtcggcatcgccaaccctcatctccccccctcctctccaccgacctcgatctcgcccctccccccacgcgcgcgatctcgcccagatctcgctgagccgccgccgccgccgcagcagcagcggccatggagaacctgatctcgctcgtcaacaagctgcagcgggcctgcaccgccctcggcgaccacggcgaggagagcgccctccccaccctctgggactcgctgccggccatcgccgtcgtcggaggccaggttcccgtcgtttcccccctacccgtttttatctcgctcggatctggcccctcgcgcctcagctgcgtcgatctggatctcgcgagttgctggtagggcagaaaggattagtagccgatgcggtctagctacgattggatctacgattgctgtgctcgccgaagactagatttggacgcttacatgaaatcgataggttttgtagcaactgaagctactaaactagttgatggaaccatccagctcgatggaattttgtgcggagttgcgcctgttagaaatggtttaagcttatttctgtaccagaatgggtgtacttcggtaacctgacgtttgaactttcctgatacgtttgatagagttcgggtaaatcctcggtgctggagagcgttgttgggaaggatttcctaccaagaggctcaggtatggcggttccaatagcaagtgcttgtataattcagtgttattgctcctgttttatctgatttggaatttttggatttggtttccaggcattgtcacccgtcgtcccttggtgctgcagcttcataggatcgacggagacagagaatatgcagagttcatgcaccttcccaggaagagattcactgatttcggtactccatctaccttttccttcatttttggtcatatcattctgtgattaaaattgcgagattgcatgtttatggagatcatatattcaaactgaactagattgccaatgttggatgatagtcaaacatatatgattacacctgtaattgttggtggaaacagtctttcaagtgctaaacatatattcaactgcatgatggttaatgatgatagtcgtattcttgcagctcttgtgaggaaggagatagctgatgaaactgacagagaaactggtcgttcaaagcaaatatcatcggtccctattcatttaagcatatattctccaaatggtaagataacaataatataaaatgtcagttcgatgtagttgctttatcacagtcaaattggttcattttgattattgtttgctgagatggatatgtggcttaaaagctgttccttttgtctgttgcttacttagtgagatctctgtcattgataagatgaccataccttatttgtctttatatgtgcatgcctgtttatgatttatctggtttctagtatctatttttgttagcgtcttaactcccactcttttgcagttgtgaacctgactcttatcgatcttcctgggcttactaaagttgctgttggtcagtattacccattgtcatttgtgagctattttcttttgtttgttctttttaaagaggtccatttcctgatttaccacttgctatatgctttccagagggtcagcctgacagtattgttcaggacattgaaaacatggttcgctcgttcatagaaaaggtatattttttgctgtaaccttttaatatttgtccactgccattgctgactatgcttgccttatttcggtaccatagctttgtatgcacatatacagtaatttattctatgcatatttgtttcgacattcttatgatttcagccatgtgttagcatatttggaatatgttttttgtatcatgcattatgcttgtagtgtgtgagctatgcttatcttgtcatgtatcatgtctgtaatgttgcaaaagcttatatgtatatcgaccctttttggtttgtttcagcccaattgtatcattctggctgtttctccagccaatcaggatcttgcaacttctgatgcaattaagatttcacgggaagttgaccccaaaggtatgcctttgttgtaagccatttggataaaggatggcaatcatgttttttgagatgtggtttgtcttgtaatgttcaggtgaaaggacgtttggtgtgcttacaaaaattgatctaatggacaagggcaccgatgctgttgatgtaagttttttcccagctaaaattaattgctaaaaactttattatcgatacattttgtccccggagatgtcaacatggattattgttcccttgcttttgggaccttttaaatctcctatgttgaatattcttctgttctatctgttggaagatatacagttgtagaaaatgaaggttatgtttgttctttgagctgtattttcttacggttcttttctgcagatattggaaggcagatcataccggctccaacaacaatggattggtgtcgtcaatcgatctcagcaggatatcaacaagaatgtggacatgattgctgctaggcgcagagagcgtgaatatttttcaactacgccagaatacaagcaccttgctcataggatgggatcagaacatttagcaaagagtctctcgaaggtatgcctttcatttcgtttctaatgtagaatacctgtaactctgtttggtatattgactcttaaatgttttggtgtatatgtagcatttggagactgttattaagtcaagaatcccagggctccaatctctcattacaaagacaattgccgaactggagacagaacttaatcgacttgggaagcccattgctacagatgctggagtaagattagggcttttttattctttaattagatactggtttattgagcctaattctgcatcccctttttatgctaattgctaatgtagtgcccattttttttgtgtatgttcttgatcattgtgctaatggacataattggtttgtacatatttggccatgcagggaaagctgtacacgatcatggaaatatgccgcatgtttgatggtatctacaaagaacatctggatggagtgtatgtttcaaacttaatgtttctgttgctaaatgttctcttagaagttttattgtagctacgtgtgtgcttcctgaattccgagataaaataacattttatcctaaaataacattttcccctctctgatctgtataagccttctaaaatttgtgtggccctaatttgataagctctcctttggtgttagtcttgtgtgtttactccaacgtaagcatacagcctattttaggttcttggcaaagtaacctgttaatttgtcttgtatttttaaacaataaatttctatcaaatgtaataaagatttcaataagcttgcttgggcgtacatgcacctagaatctccagttgtttttctttcagaagaaagggatcgtcgaatttaaccctaaaacctaattacatgatagcacttacaaagttattgctaataaagatttgcatattttcttgctgctgaagtatgcaatttaacacaatttaacttgtagattgttatatgcaattagcatcattctcccttgtgtgcttgttcttttgtgaattgaatgttgctttccctgatgcttacccacaaaaattctaatgtccaggcgtcctggtggtgagaaaatctatcatgtctttgacaatcagtttcctgtagccattaaacggttgcagtttgacaaacaactggcaatggaaaatgtgaaaaagctcataacggaggctgatggataccaacctcatttaatagctccagagcaaggatatcgacggctcatagagtcttgtcttgttagtatcagaggtcctgctgaggcagctgtggatgcggtatgctatctattaatttgatctattttttagtcttaacaaaatagcttgagcgtttctaacttttcgtgtcatatattgttgaagaatgtgcactacaacattatcgtatgtttgttgtactgacaggtccatgcgatactcaaggaattagtgcacaaggccatcaatgaaacacatgtaagtcttcgcactgttgcacaatgttttctgtaacttatactggggaatatgtgcattctgatggtacatgaggtatactgattgtactaggagtttaggaggtaatcaattaatactgttgaaatttttgccttctgttgtttcaatattttgtctttctaataaaatctgaacctggaacttttttgctcgacttaagatgagaagcagcatgataattaatttgcatgcttgtcaaattgtcattactccacttgtaattgtgtaagcgtcctaaaagatgtgagtgagttctctgcaggagctgaagcagttccccactcttcgtgtggaagtaggcaatgcggcttttgagtcattggacagaatgagggatgaaagcaagaaaaacacattaaagcttgttgatatggaatgcagctacttaaccgtagatttcttcaggaaacttccccaggatgttgagaagggtggaaatccaagccactctatttttgatagatataatgattcttatcttagacgaattggtaagtcatcaaccattcttccttgtatatattcaatgtatactgttactgctttgcaatgatggccatttgttgaagttgagaagtggtttatcatattgttgcaaccttgtgtaatattgcccactaatttagtttaatgatgaatatacatgccatcaaggctttgcttggctgccttttaacttattttacctgtattttctgctgaaccttgctacaattcatactcaacaggaacaacggttctggcatatattaacatggtatgttcaaccttgaggaactctattccgaaatctattgtctactgtcaagtgcgggaggcaaagcgctcactgctcgatcacttctttactgaattgggagcaagagaggtgagttcttctttcttaaagcttaataaagcataacataagtttttgggccctgttttacattttttttggtgtgccttttaaagtccaacagaattgatctaactagtaatactgccttttaaatgttatgcagattaaacaactttctaagcttcttgatgaagaccccgccgtcatggaacggaggactaatcttgcgaagaggctggagctatatcggagtgctcaagcagaaattgatgcggttgcatggtccaaatagtcctgatcatctacttatcatactcatgtttctcctttactcccagttggtgatcctcccctatcttggggcatatatagctgattttaccccgttctaggtcattcatagatcaacgcagctgtgaggtgtcatttggtttgtgcttttgttccttgtgcttgaggatctaggagacaccaggctgctgtactttttgtattacgaccaagttcatatatcgtgtttaatttttgtcacagcccattctttcgttccgtttacatatatcgtcttcaatttgttact</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062813.1 RefSeq:Os05g0556100]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 5]]
 
[[Category:Chromosome 5]]
 

Latest revision as of 08:38, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information