Difference between revisions of "Os05g0588700"

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(Created page with "{{JaponicaGene| GeneName = Os05g0588700| Description = Histone deacetylase interacting domain containing protein| Version = NM_001063011.1 GI:115465752 GeneID:4339773| Len...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
GeneName = Os05g0588700|
 
Description = Histone deacetylase interacting domain containing protein|
 
Version = NM_001063011.1 GI:115465752 GeneID:4339773|
 
Length = 7225 bp|
 
Definition = Oryza sativa Japonica Group Os05g0588700, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
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Please input expression information here.
AP = Chromosome 5:29399229..29406453|
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CDS = 29399522..29399594,29399671..29399771,29400041..29400193,29400309..29400447,29400554..29400624<br>,29400927..29401238,29401510..29401808,29401916..29402176,29402270..29402376<br>,29402493..29402644,29402721..29402875,29404851..29405046,29405245..29405373<br>,29405445..29405546,29405641..29405794,29405875..29406047|
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===Evolution===
GCID = <gbrowseImage1>
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Please input evolution information here.
name=NC_008398:29399229..29406453
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source=RiceChromosome05
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You can also add sub-section(s) at will.
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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Please input related labs here.
name=NC_008398:29399229..29406453
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source=RiceChromosome05
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==References==
preset=GeneLocation
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Please input cited references here.
</gbrowseImage2>|
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CDNA = <cdnaseq>atggattcttccgccggtgatcctggcgatggcgttccgtccaaaagggcgaggacggagagggatccctacagagtcgagacgatggaatttttggtacttgtcaagtcagagcttcctgacgacgtatacagccatttcgtccgatctatgatcaagataaggaggcagaggaacatgtcgattgaaaaatgcaaagaaattattctcgagatattggacggccaacctgaagccatacaggtcttcgagcacttcatccaaggatatagcccttgcagagcaaagatgcgtagcaaggcacacaatttcgttgagagagtgaaggcatgtcctgatatcagccgcgaagatttccatgctttgctgaacgttcttgctaaatattataagaacgaaatcaagaccagcgaagaagttctcgaaaaggttgagagaatcataggtaactatcccgagttcctagaagagttcaaaatttttgtgcctcaccacctaagggctcatctgccaaatgagaaatcttgcacaagtccaaagagtagtcgagtcagcgagacgtttgtgagttttactctagatgctatgaataaattggatggtctccgagtaaaagcaaccaatggaagaaaccaagcgactccattgaagtatactcaggaccaaaaccaaaaccatgaaggcagaggttatagtttgaggcataaacaaactaagagaaccactggcctgattgaaaatcctagaaagcaaggtgatgacaaatcacctcatgcagaagatgatgaggaacacaaggctgaacctttgcttcagtggagtacctcacgagaaaacgaattacccctaaaagtggatcctagtaattgcaagcattgcactcctagctattgcctgctaccaaagaattgtgtgactctccagtcaagctaccaaactgaacttggaaggtctattttaaatgattctttggtttctgttacatctggacgtgaggattgctacaagttcagaactaaaaatcaatatgaagaaaacatgtttaagtgtgaagatgacttgtttgagagtgacatgctattgcagaggtttagagcaactgctgactttattgaggatcttcaatatcggtttggcagcaatgtgaaaattcaagaacacctaactcctctacataagaggtgcattgaacagctatatgatgattctggcattgacatgcttgatgctttgtcagaatctgagaacaccagttctgctcttgctgttatactttctcgtctaaatcagaagataggagatttctccgaggcacgattatccttgaataaaatgtgcccagatactgttgccaataattactacagatcacttgatcattgtagtccctccttcaaacaactagacatggaaaggatgagcccaaaagctttgctggcagaagacaaacaaatcagtcggatcaaatctcatactgatattcacattcatgaggacgtaggcgttatcattaactatgcatatagtagaagttgttctactgaagataagccaatgatgaattggacaaagttagtaaaggcatttgtttctgtgaagtttcaatggccagacttgaaggatacagtttctcgcagaaacgtttgtgaacattgtgggatgagcagagattttctcaataatattcctgttgctgtgcttactaatgagtttgttttttcttcaaaggaagtggaaagtctaagagccaagtccaatgagtctacttcttcgcttgatcattttgacgcggaggttgaggagggtgagttcataccagatgtagaaaatatacagttgcgtgttcgatgtttgcctaccaataattctatgcatagtacctatggacattggagtggatctgaagagcataaatcatcaagagatgactccaacaatgaggttggaagttcagaatattttggaagaacatctaaagaatgtgatgcaaacagaggaatatcttgttgcactctggctgtgctctgccggcttctccaggttatgtacgagagactactagtagctaagaatctttcagaaggagcaagcacccatgattcatatgcacatttcaaggagaaactctgcagcctgattgatgggtctactgacaattggaactttgagcagcactgcttgaaatttcttgggcccaactcctacgtactatttactttggataagcttatcgatcgtgttatcaagcagatttgcaagatatatccaagccgtgaagacagctctgtccttcagcggcaagagaggtcaagaagaacatttaacattttgaaagacccagctttgccggcaagaagaacaaactcgtccaaagagctgttgcatcatcaaaatgcaagaggcacatcaattgagttgccgaagcaaggtcgtgaggaagcaaaaggaggttgtgagtcccatggtgacactggaaaaatgaaacagaaccattttcagagaaggaaaaaacgcgctttggagaacggtccaccgagtttttctcagcctggctcagggaatcaagctcataattga</cdnaseq>|
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==Structured Information==
AA = <aaseq>MDSSAGDPGDGVPSKRARTERDPYRVETMEFLVLVKSELPDDVY                    SHFVRSMIKIRRQRNMSIEKCKEIILEILDGQPEAIQVFEHFIQGYSPCRAKMRSKAH                    NFVERVKACPDISREDFHALLNVLAKYYKNEIKTSEEVLEKVERIIGNYPEFLEEFKI                    FVPHHLRAHLPNEKSCTSPKSSRVSETFVSFTLDAMNKLDGLRVKATNGRNQATPLKY                    TQDQNQNHEGRGYSLRHKQTKRTTGLIENPRKQGDDKSPHAEDDEEHKAEPLLQWSTS                    RENELPLKVDPSNCKHCTPSYCLLPKNCVTLQSSYQTELGRSILNDSLVSVTSGREDC                    YKFRTKNQYEENMFKCEDDLFESDMLLQRFRATADFIEDLQYRFGSNVKIQEHLTPLH                    KRCIEQLYDDSGIDMLDALSESENTSSALAVILSRLNQKIGDFSEARLSLNKMCPDTV                    ANNYYRSLDHCSPSFKQLDMERMSPKALLAEDKQISRIKSHTDIHIHEDVGVIINYAY                    SRSCSTEDKPMMNWTKLVKAFVSVKFQWPDLKDTVSRRNVCEHCGMSRDFLNNIPVAV                    LTNEFVFSSKEVESLRAKSNESTSSLDHFDAEVEEGEFIPDVENIQLRVRCLPTNNSM                    HSTYGHWSGSEEHKSSRDDSNNEVGSSEYFGRTSKECDANRGISCCTLAVLCRLLQVM                    YERLLVAKNLSEGASTHDSYAHFKEKLCSLIDGSTDNWNFEQHCLKFLGPNSYVLFTL                    DKLIDRVIKQICKIYPSREDSSVLQRQERSRRTFNILKDPALPARRTNSSKELLHHQN                    ARGTSIELPKQGREEAKGGCESHGDTGKMKQNHFQRRKKRALENGPPSFSQPGSGNQA                    HN</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
DNA = <dnaseqindica>6860..6932#6683..6783#6261..6413#6007..6145#5830..5900#5216..5527#4646..4944#4278..4538#4078..4184#3810..3961#3579..3733#1408..1603#1081..1209#908..1009#660..813#407..579#tctttccctcggccgcgcggccgcgccgcgggggttctagaaggttccggaaggtgtggagtctcggtgccctcgtcgctcgcctccttcctccaggcgtccgccgccgccggcatacttgaggtcagtccctccactcgcgtgcgcgaatcaaggcgccgagatcacgagagtactcctcctaatcgcctcggtttcgtcagcccttacggcggattgatgacttggttgaatcgaattcctttttcggtttttttgcgaggggataaccggagcggcggtagattttggttgcctagacgaggccgtcactgtagattcgtctgttctcgtgcaggtctttgctgatttgttgcatctgtctgctcttgtgcaggtgttcgcctaaataattaggagaaatagaatggattcttccgccggtgatcctggcgatggcgttccgtccaaaagggcgaggacggagagggatccctacagagtcgagacgatggaatttttggtacttgtcaagtcagagcttcctgacgacgtatacagccatttcgtccgatctatgatcaagataaggaggcagaggtatcaatcactatatcctctcatctactcggctgtgagttttgatgactgatgataaagaatcctgatcctgaattcaggaacatgtcgattgaaaaatgcaaagaaattattctcgagatattggacggccaacctgaagccatacaggtcttcgagcacttcatccaaggatatagcccttgcagagcaaagatgcgtagcaaggcacacaatttcgttgagagagtgaaggtgcccaaagaaacccgctttgcttgctccctccttgtgtggtgtgggtgctcgtttggtaccaattgttgttaacttgaccttatacctgcaggcatgtcctgatatcagccgcgaagatttccatgctttgctgaacgttcttgctaaatattataagaacgaaatcaagaccagcgaagaagttctcgaaaaggtgttcattcttcaataatggcttgacaaaataattgcaaaggccctgatttcacaatgatttacttgcaggttgagagaatcataggtaactatcccgagttcctagaagagttcaaaatttttgtgcctcaccacctaagggctcatctgccaaatgagaaatcttgcacaagtccaaagagtagtcgagtcagcgaggtatacattacatgcttcgcataacatatgctaaggcctaactgctaatgatcattcctcgtatatcttataacatgttggtgaacaattattttataaataatttattgaactcagtatcactagctcactgctttcagtaaaattttctattctgagcgcatgtgccatcatcagtttatcaaatttcctttgcagacgtttgtgagttttactctagatgctatgaataaattggatggtctccgagtaaaagcaaccaatggaagaaaccaagcgactccattgaagtatactcaggaccaaaaccaaaaccatgaaggcagaggttatagtttgaggcataaacaaactaagagaaccactggcctgattgaaaatcctagaaagcaaggtgtgtgaaagttttctcttaatttgtttattctccaaatacaggcgagccctaggtgctttgctttaacatccttctcaggaaataatgaagttagacacaaataatgaaccctttcttaataacagtcatacatgcccaactgttttcctttttgctagagaatgcacaaatgatttgcgtatctttgcattcacctatttcatggtatcagatgttatttcgaagtatgccctagcaattgagagaaatttgataatttgacactttcttcgtcgccaatttgctttaattgactcttgtgagatgacatgtgtgaccatttgagggaatagaagtgtgccagggtgtcaaataatcgaagcccacatcgtggagtgtcactatcaaatttctcagcaattgagtgctacatttgctagagcttattttcatatatgaaaccagcatggtggcccgcgcagattacgcggctagcatcattgtattttctctcatataatagtataaatatattctcaatttattattaaaatgacaacataaatttaaattttgtactaaccaaactaccaatgtgtaacagtacattcatattgtattgtatatacgtgatagttattaattatttttaatatcaaattttagttatttctaaattgtattcccatatagactctagattcgtcttccaatattattccttattttttaattccgaattttcattatttgtaaattgtacttcctccatttcacaatgtaagtcattctagcatttccctcattcatattgatgttaatgaatctagacatatatatctatctagattcgttaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaaggagtatatatatagactctaggctcttcttccaatattatttatttttaattctgaattttattatttctaattgtatttctatgtggactctagactcatcttttaatattctttattttttaattttgaatttcagttgcttctaaattgtattcctatatggactctagactcttcttcccatattttttaattatgaattttagttttttgtaaattgtatttctatatggactttaaactctacttttaattttattattattattattccgaattttagttaattataaattcctatatggactctataatcttattctaatattctttattttttaattcttcatttcagttatttctaaattgtatttatttctaaattatatttctatatggactatatactcttctttcaatattcttttttaattccgacttttagttatttctaaattgtatatctatatggactctaacctaattttaatttacttttttttaattccgaatttttattagttctaaattgtataccggcatggactgtagtcttctcttccaatattctttattttttaattccgaatttcagctatctctaaattgtatttctatatggactttgtttttctttttctccgattaatatgataatttctaggccgtgagagcgaacgtggaggcaagttactagataataaattacaatttacagtctctaggaggaatgcaccttagaattttttaaatgaaaaggttaaaagttgaatatattggttcttaaaccctttcgtgcttcctaaattatcctaaaaagaaactatgaggaccgctattgtgaaccattcaattcaaatgttgtacagcatgatgttccgacttctgagtacaactgttttccaacagttaggtgtgttggtttttatattatctagtttctttctattgatgtgcacatgatacaatgtaacaacagacaaatgcagtatcattttgtgtggctagccacttgtttttgtattttgtatatatttaattgaaccccttgtgttgaagttatgtttaatcatttatgataggtgatgacaaatcacctcatgcagaagatgatgaggaacacaaggctgaacctttgcttcagtggagtacctcacgagaaaacgaattacccctaaaagtggatcctagtaattgcaagcattgcactcctagctattgcctgctaccaaagaatgtaaattcctacaaacgcacaagttttccatgtaaatcattggcatctgttctaacattctctttcttgatctcagtgtgtgactctccagtcaagctaccaaactgaacttggaaggtctattttaaatgattctttggtttctgttacatctggacgtgaggattgctacaagttcagaactaaaaatcaatatgaagaaaacatgtttaagtgtgaagatgacttgtaagtacacagatgttagtttttcagatgcttcagcactgttttcattctttcagctatcagcaaaaatttgcctggtcactgataatcaatgaatgttgtgtactactttttaggtttgagagtgacatgctattgcagaggtttagagcaactgctgactttattgaggatcttcaatatcggtttggcagcaatgtgaaaattcaagaacacctaactcgtaagtatactgtactatgtaaatttttcggagccaaaacttttcgagtggttagctgagtgttacattttttccttgtttttacatgtgcagctctacataagaggtgcattgaacagctatatgatgattctggcattgacatgcttgatgctttgtcagaatctgagaacaccagttctgctcttgctgttatactttctcgtctaaatcagaagataggagatttctccgaggcacgattatccttgaataaaatgtgcccagatactgttgccaataattactacagatcacttgatcattgtagtccctccttcaaacaactagacatggaaaggatgagcccaaaaggtacttttactattatgtactgctgaagctaggttctgcgttataattcatggaaattttaccattttattagttcgttcttactcatttcagtatctctcttgcagctttgctggcagaagacaaacaaatcagtcggatcaaatctcatactgatattcacattcatgaggacgtaggcgttatcattaactatgcatatagtagaagttgttctactgaagataagccaatgatgaattggacaaagttagtaaaggcatttgtttctgtgaagtttcaatggccagacttgaaggatacagtttctcgcagaaacgtttgtgaacattgtgggatgagcagagattttctcaataatattcctgttgctgtgcttactaatgagtttgttttttcttcaaaggtatatgtacttacaacactttactcttagaattatgatgatttcgtgttttggatttgcataaatagcttctgtcatgaaagttaattgatgaacacttactttctcatctttatcaagtaaaagtaacttgggtgtttgtacagttttccccttttccttaatatacatcggtcggcattcttcgccgtcccggcgaaaaaaaaaagtaacttgggtgacttgaaagataaatgtaagtaaagctacatgatttttattttccattcaggaagtggaaagtctaagagccaagtccaatgagtctacttcttcgcttgatcattttgacgcggaggttgaggagggtgagttcataccagatgtagaaaatatacagttgcgtgttcgatgtttgcctaccaataattctatgcatagtacctatggacattggagtggatctgaagagcataaatcatcaagagatgactccaacaatgaggttggaagttcagaatattttggaagaacatctaaagaatgtgatgcaaacagaggaatatcttgttgcactctggctgtgctctgccggcttctccaggtatttcagtatgttcctattacatatttttgtttggattggcgacttttaatatgccagtgagcactgagcaagacagcaagctacacagttcaacacaaatatgtatgctcttactttcaaaaaaatatttatgtatgctcttactttgttatacatgaaagagacggcttgctcaatatgcatcaccatgattgttaatctaatagacagcagtatgatatttcttctggacaaactattggcctctatacctaattattggcattatgatcttattttatttttaatttatgtggcaggttatgtacgagagactactagtagctaagaatctttcagaaggagcaagcacccatgattcatatgcacagtaacgtctaagattctcacctattatctataagtagaattattcaaatttcaccattgaatatctgtgttttaacaacaactttttattttattgaatggtgtagtttcaaggagaaactctgcagcctgattgatgggtctactgacaattggaactttgagcagcactgcttgaaatttcttgggcccaactcctacgtactatttactttggataagcttatcgatcgtgttatcaagcaggtaactgaattcctttgtgcaatggtaaattggaagtgcggtttagcttttcttggtaactttgttcattagttcgttccagacatttgtttaaaattcacttttcttctttcagatttgcaagatatatccaagccgtgaagacagctctgtccttcagcggcaagagaggtcaagaagaacatttaacattttgaaagacccagctttgccggcaagaagaacaaactcgtccaaagagctgttgcatcatcaaaatgcaagaggcgtaagtcttctactctaaaaactttacctactaccagcagcaagctactaagcacgcccactttcatctagttgttgagaacgtgtttagtcatgcatgcttagccatgagatgtgtcatgtgtgcaaatgtgaaatattggtgtcatgcatttcccctttttccacctcgcaaaagaaatacatttcctctgcgtttcactgaatttatcagatattcacaactgttgcatgtgtctttttttcccttgttgcgatattccaattcagacatcaattgagttgccgaagcaaggtcgtgaggaagcaaaaggaggttgtgagtcccatggtgacactggaaaaatgaaacagaaccattttcagagaaggtaaggatcctttgacagaatgattagaattccttattggttccagctatttcgacattatagatgtcttttacaggaaaaaacgcgctttggagaacggtccaccgagtttttctcagcctggctcagggaatcaagctcataattgaacatgtagttatatgcagccctgcagaaggctatagatttgcaaggatctttcaacacaaaatgtgcacggcacaacagctatttgaggatatctggagggaagcagaaattttcatggagaagcaggacacagcataaccagccctagggagaggttctgcctaggcagagagctctgcaacctcccgctctcctgtagtaactctctatcttctcaacctgggtagcggacttggccaaagccctgtaaattgatccttttgggctagttctccaaaccctgtaactttgt</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063011.1 RefSeq:Os05g0588700]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 5]]
 
[[Category:Chromosome 5]]
 

Latest revision as of 08:40, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information