Difference between revisions of "Os04g0178300"

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(Created page with "{{JaponicaGene| GeneName = Os04g0178300| Description = Similar to Copalyl diphosphate synthetase (Fragment)| Version = NM_001058706.1 GI:115457141 GeneID:4335090| Length =...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
GeneName = Os04g0178300|
 
Description = Similar to Copalyl diphosphate synthetase (Fragment)|
 
Version = NM_001058706.1 GI:115457141 GeneID:4335090|
 
Length = 8190 bp|
 
Definition = Oryza sativa Japonica Group Os04g0178300, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
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Please input expression information here.
AP = Chromosome 4:5310457..5318646|
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CDS = 5310552..5310684,5311168..5311253,5311406..5311709,5312599..5312782,5313404..5313618<br>,5314219..5314339,5314465..5314577,5315426..5315658,5316320..5316435<br>,5316552..5316650,5317115..5317294,5317419..5317506,5317602..5317811<br>,5318202..5318423|
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===Evolution===
GCID = <gbrowseImage1>
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Please input evolution information here.
name=NC_008397:5310457..5318646
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source=RiceChromosome04
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You can also add sub-section(s) at will.
preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
GSID = <gbrowseImage2>
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Please input related labs here.
name=NC_008397:5310457..5318646
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source=RiceChromosome04
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==References==
preset=GeneLocation
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Please input cited references here.
</gbrowseImage2>|
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CDNA = <cdnaseq>atgccggtcttcactgcatcattccagtgtgtcaccttgtttgggcagccagcatcggcggccgacgcccagccattgctgcaagggcaacggccgttcctacaccttcacgctcgccgccgtcgaccatgcgggcccatgctaataagcaaatcaccgccgtacccggcctcggaagaaacacgcgaatgggaagcagatggacaacatgaacacacggatgaactaagagagacgacgacaaccatgatcgatggcatcaggacagcactgagatcaatcggagagggagagattagcatctcagcctatgacacttcgttggttgcccttctgaagaggctagatgggggtgatggtcctcagttcccatcaaccatcgactggatcgttcagaatcagctaccggatggttcatggggtgatgcctccttcttcatgatgggagaccggatcatgagcaccctcgcttgtgttgtagcgttgaagtcatggaacatccacaccgataaatgcgagagaggtttgttgtttatccaagaaaatatgtggaggttggcccatgaggaagaagactggatgctagttggatttgagattgccttgccctcgctcctagacatggctaaggacctggatcttgacatcccttacgatgagccagccttgaaagcaatatatgccgagagagaaaggaagcttgccaagattccaagagacgtgctacactctatgccaacaactttacttcatagccttgagggaatggttgacttggactgggaaaagctcctcaagctccggtgtctcgatgggtccttccattgctcccctgcttcgacggctactgctttccagcaaacaggagaccagaaatgctttgaatacctcgatggaatcgtcaaaaagttcaatggaggagttccctgtatctaccctttggatgtgtacgaacgcttatgggccgtcgataggctgacgaggctgggcatatcaaggcacttcacaagtgaaattgaggattgcttagactacattttcaggaactggactccagatggattagctcacacaaagaactgcccggtaaaggatatcgatgacacggccatgggtttccgtctcctccgactttacggataccaagtcgacccatgtgtgttgaagaagttcgaaaaggatggcaagttcttctgcttgcacggggagtccaacccatcctctgtcaccccaatgtacaacacttaccgggcctcccagctcaaatttcctggcgatgacggtgtccttgggcgagctgaggtgttttgccgctcattcctccaagacaggagaggctcaaacagaatgaaggacaagtgggccatcgccaaggatatcccaggcgaggttgagtatgctatggactacccatggaaagcaagtttaccgcgtattgaaacaaggttgtacttggatcaatatggaggtagtggcgatgtatggattgggaaggtcctgcacaggatgactcttttctgcaacgacctgtacctcaaggcagctaaagctgacttcagtaatttccagaaagaatgccgagttgagttgaatggccttagaaggtggtacttgaggagtaatctggagaagtttggagggactgatccacagactacactgatgacatcctacttcttagcttcagccaacatcttcgaggcaaaccgagcagcggaacgtcttggatgggctcgcgtagcgttgcttgccgatgccgtctcctctcacttcaggagaatcgggggaccaaaaaattcgaccagcaatcttgaagagcttatcagccttgttccttttgacgacgcttattctggcagtcttcgtgaagcttggaagcagtggttgatggcatggactgcaaaggagagcagccaggagtcaattgaaggggacacggcaatattgttggttcgtgccatcgagatttttggaggacggcatgttttgaccgggcaaagaccggacctttgggagtattcccagctcgagcagctcacctcctccatctgctgcaaactttccaggagggttcttgcccaggagaatggggaaagtacggagaaagttgaggagatagaccagcaagtggatttggagatgcaggaattgactcggcgcgttctacagggctgcagcgctattaacagactaacccgggagacgtttctccatgtggtgaagagcttctgctatgtcgcctactgctcacctgagacaattgatagccacatcgacaaggtcatattccaagatgtgatttag</cdnaseq>|
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==Structured Information==
AA = <aaseq>MPVFTASFQCVTLFGQPASAADAQPLLQGQRPFLHLHARRRRPC                    GPMLISKSPPYPASEETREWEADGQHEHTDELRETTTTMIDGIRTALRSIGEGEISIS                    AYDTSLVALLKRLDGGDGPQFPSTIDWIVQNQLPDGSWGDASFFMMGDRIMSTLACVV                    ALKSWNIHTDKCERGLLFIQENMWRLAHEEEDWMLVGFEIALPSLLDMAKDLDLDIPY                    DEPALKAIYAERERKLAKIPRDVLHSMPTTLLHSLEGMVDLDWEKLLKLRCLDGSFHC                    SPASTATAFQQTGDQKCFEYLDGIVKKFNGGVPCIYPLDVYERLWAVDRLTRLGISRH                    FTSEIEDCLDYIFRNWTPDGLAHTKNCPVKDIDDTAMGFRLLRLYGYQVDPCVLKKFE                    KDGKFFCLHGESNPSSVTPMYNTYRASQLKFPGDDGVLGRAEVFCRSFLQDRRGSNRM                    KDKWAIAKDIPGEVEYAMDYPWKASLPRIETRLYLDQYGGSGDVWIGKVLHRMTLFCN                    DLYLKAAKADFSNFQKECRVELNGLRRWYLRSNLEKFGGTDPQTTLMTSYFLASANIF                    EANRAAERLGWARVALLADAVSSHFRRIGGPKNSTSNLEELISLVPFDDAYSGSLREA                    WKQWLMAWTAKESSQESIEGDTAILLVRAIEIFGGRHVLTGQRPDLWEYSQLEQLTSS                    ICCKLSRRVLAQENGESTEKVEEIDQQVDLEMQELTRRVLQGCSAINRLTRETFLHVV                    KSFCYVAYCSPETIDSHIDKVIFQDVI</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
DNA = <dnaseqindica>96..228#712..797#950..1253#2143..2326#2948..3162#3763..3883#4009..4121#4970..5202#5864..5979#6096..6194#6659..6838#6963..7050#7146..7355#7746..7967#atcattcatcccaatatctattgcatctgcaagagcgatcgagagagaaaaacaagatctatctatagcagctagctagctagcacaagaacgatatgccggtcttcactgcatcattccagtgtgtcaccttgtttgggcagccagcatcggcggccgacgcccagccattgctgcaagggcaacggccgttcctacaccttcacgctcgccgccgtcgaccatgcggtaatccatctcgatagcactatatatatcgcgctatacatatatacgtatcattaattgctgggttctacaattaatgttccggtgaactaaacttttctatggacggagggagtaattaagacgataacggaatgtctaataattaaatgacagtgcatgctgtctgtttctttatgtaggattttcatgtagtcctttcgtttaaaaatgcatggtgccgttgacttttcacacaacgtttgactatttgtcttattaaatttttttatataaatatcatttatttctttatgacttgttttattatcaaataaaatataatcttaacttatacatttacatatttatactaaatttttgaataagataaatagttaaacgttatgtgaaaagttaacggcgtcgtacatttttaaatggagggagtacttgataaacattctcacctcacctcacctcccatatatgcctgattttcagggcccatgctaataagcaaatcaccgccgtacccggcctcggaagaaacacgcgaatgggaagcagatggacaacatgaacacacggtactgtatacacgtataagcttcacactaccacatgtttcaaaatatagtaacctaagacggaggatgtattaagcggatattgatcattaattgtgcatatgcaaatttatgaacgaattaattgacactgataaacccctatctcaaaggatgaactaagagagacgacgacaaccatgatcgatggcatcaggacagcactgagatcaatcggagagggagagattagcatctcagcctatgacacttcgttggttgcccttctgaagaggctagatgggggtgatggtcctcagttcccatcaaccatcgactggatcgttcagaatcagctaccggatggttcatggggtgatgcctccttcttcatgatgggagaccggatcatgagcaccctcgcttgtgttgtagcgttgaagtcatggaacatccacaccgataaatgcgagagaggtatgtgtatatcactagatttccttttctccattgtctcttcttgtggacacaatccttgatgtttctttttgatggactgaactttttgattttgtttactggtttgttttgattttctttaaaaaataaatgtgtttattaaaataatttaaaaaaaatcaaagttttacaaattcacaccccctgacatcacttagtgtagcgttttttaaaaacaccctcctaaataatattttttataacatgacacatggtcattgggatatgttaacggtcgtcgtacgaaggagctgaccatttttcaggcaacacccttatgaagggggccacttgtaaaatggcagcctagcatattttgtaagcgaccttcttgtaaccctcccaaaatagagtttctctatataggaagtggattttttcccttgagaggatgtccccttgttttgtgcatggtatttaaaaaatcatgaaaaatttgaaaaaaaatatcaagatagatcaatatatgatacatctttacacaaacatacaagttgaaatattacttatacaatttgaaaaaaaataacaaatttaaccacgaattacatgtttcattcatagttaaatttattacttttgtttctagttgtataagttaaattagaatatgtatgtttgtggagtgacatatcacatattgttcaatcttactattttttttgaattttctaatgacttttaaagatgaaaaataagaagacatccccttaagcaattaatagagtttctctatgtgtgtgcgtgtgtatataatatatgtatacatatattgcgctatcaacatgtttgtttttggatttactatgccaataatttgagagatgacaaggatttattgtcgtaggtttgttgtttatccaagaaaatatgtggaggttggcccatgaggaagaagactggatgctagttggatttgagattgccttgccctcgctcctagacatggctaaggacctggatcttgacatcccttacgatgagccagccttgaaagcaatatatgccgagagagaaaggaagcttgccaagtatgtatgcctatatctacttattaattattttgtttagtaaaattttagtcatgccacacacgatagaatataaaggataaaatccatcgtgaaagcgcccgcttgcttctctcttctctggtctctctcacaaatagctactctctccggggtgataatacttatctttttagacaaggacacggtctctaaaaagtaactttgacaactattttctattataatatatatatagaaatattaacaaatatatgattttattaaagtactttttaaactaatctacacatatggtcttcatattttaagataaatattttagaaattatttttaatcaaagattttaatgtttgactttacccttgttcaaaacgactaatattatcagtccgaagtgagtagcagatatggacttattgcatatgcccgaaacatgtaatatgtggatctatcgtatattagggttgcattactgtaaaaccattcacaaattattctccttttttgcttttcttatacagttaaaattattgtgagatttagagttatttttgctctaacatatcgcattctaacatctttttacaatgaatgaatgttttgcattcaaattctaggattccaagagacgtgctacactctatgccaacaactttacttcatagccttgagggaatggttgacttggactgggaaaagctcctcaagctccggtgtctcgatgggtccttccattgctcccctgcttcgacggctactgctttccagcaaacaggagaccagaaatgctttgaatacctcgatggaatcgtcaaaaagttcaatggaggaggtaattattgaagccgatttaccaaaatattttttgttgatttacatgcacaaaatttcagaattccataaagtatattaattaatttctccttatattagctagtttcttcttccttcctctcccagtacactgactcaattcaacactgtatctgtatgcaatgaaacagaagcgcacttctgtatgaaacagaacccctcccctccgcacggaaaacggaacgatagattaacacgtgattaaataagtattagttataaaaaacttgaaaaataaattaatatgattttttaaagcaactttaatatataaacttttttgtaaaacgtgtacgtttaacagtttgaaaaacgtgcatgcggaaaacgagaaagataggctggaacccatgagaaagaacgcaccaagaggctaggttcagtagttcgtttagcttttgcaatctccttgtttgttttcattagcactactccctaacttgtaaatggtacctttactaacaactttttatatacaaccttttccagaaaaattaaataaacttacaatattattatgtttaataattacagcttacttattcattatgttttccagttccctgtatctaccctttggatgtgtacgaacgcttatgggccgtcgataggctgacgaggctgggcatatcaaggcacttcacaagtgaaattgaggattgcttagactacattttcaggtactaattaacttttaacatatctgtactaattaactttatgcacgtaggtacccaaagtgaattaattaatgtttagttgaccatatatatatataatatggatattaattatactggaacaggaactggactccagatggattagctcacacaaagaactgcccggtaaaggatatcgatgacacggccatgggtttccgtctcctccgactttacggataccaagtcgacccatgtaaatactgtccctcggttttatgctataaaatatttttcttaattaaattgtttaaagtttcactaagtagaaaattattttgctagaattttggtacgtcatccgtattagagtcagtttttaagttcgttcgcttttggaaatacaacatcgtgtttgagttggattttattgtttccttttggaagtataaaaggagtcgtacaataaatcttttgaaaaaacacgcatgctaacttcaaatgaaatacagactcctaattgtagctcataattttctaaaaaaaatccaatcgaattcccacggtgaattttaccctaactaaaccatataacaataataaaattaaaatagtatttacccgttgcaacacacgggtattttttctagtacaataaaaaacattcaatgttacatttaattaaactaatttgatgttatagatgttgctaaattttatataaaattaaggtttaactaggaaaaaatcatagagacttactgtaatatcaaaatataaacacatgtcctcggaagaaaagataaacacatggagtagtttactaaccgttgctaattaatgtctaataattaagatatccaacaaattaacattactactccctctgtttcaaataaattacttaccaatctagcaattctcacacaaaccaacaatatgtagaagattgtattacatggtttaccttcattaaatacatgacaacgataagtattttgatataaaatttaaattctagaatgataagtaatataaaatggagagagtatttactttaataattgaacctagctaatgtgctcaaacaataatgccatgcaggtgtgttgaagaagttcgaaaaggatggcaagttcttctgcttgcacggggagtccaacccatcctctgtcaccccaatgtacaacacttaccgggcctcccagctcaaatttcctggcgatgacggtgtccttgggcgagctgaggtgttttgccgctcattcctccaagacaggagaggctcaaacagaatgaaggacaagtgggccatcgccaaggatatcccaggcgaggtatgttaagtcctactactccctatgccaaaaaaaaaaaaaaaagagcttttcaggatgaatctgaacatgcatttgttcagacaatcgaaaatcaatgcaattttattaaagtatatatgaatgggatgtgataatactccattcctattgaaaatgcaagtttttgatgctaagctaccaactaattcattgcgtcttctacttcaatatactcctactccctccgtccaaaacaaaaacctttcaggatgaatgatatgcatttgtctagactggaacagagagagtgcctagctagcaatggaaaattaatgcaaatttattaaagtatatatggatggaatgtgataatacttcaattcctattgaaaatgcaagtttttgatgctaagctaccaactaattcattgcgtcttctacttcaatatactcctactccctccgtccaaaacaaaaacctttcaggatgaatgatatgcatttgtctagactggaacagagagagtgcctagctagcaatggaaaattaatgcaaatttattaaagtatatatggatggaatgtgataatacttcaattcctattgaaaatgcaagtttttttatgccaagctaccaactaatttattccgtcttctacttcaatatatatttattaggttgagtatgctatggactacccatggaaagcaagtttaccgcgtattgaaacaaggttgtacttggatcaatatggaggtagtggcgatgtatggattgggaaggtcctgcacaggtaattaaccgtagcttcagatgtattatatacgtattttgtccattcgttaatgatatagaattagctgcagcaaaacaaatagtcccttcttgttctaagtctgaatttttcaggatgactcttttctgcaacgacctgtacctcaaggcagctaaagctgacttcagtaatttccagaaagaatgccgagttgagttgaatggccttagaaggtaagtcctattaattccgaatttgagccaataactctttgacaaataccatatatctatactaatttaatacagtataaaatagtggtggtggtgagtccattgatctcagcacctagtcgcctaaactgatatgtaggactagcttgaaaggcattttcacattgaaatatcttatacctctaacctctccctttaatggtctaaaaacattgtttgaaaagtaaaaacaaaataaatatagagcacctaattaattttaaaaataagttctaaattgttctcttttctgcaatggatcaatgatatatttttttaatcccgtaaacaatgtatgcgtattttgctagtattttttaagacaattgaagatgagaaatgctgcacatctccatcctctgtatggtagcataccacatatatgattaatttcttactcaaaattatttacactttatatgcaggtggtacttgaggagtaatctggagaagtttggagggactgatccacagactacactgatgacatcctacttcttagcttcagccaacatcttcgaggcaaaccgagcagcggaacgtcttggatgggctcgcgtagcgttgcttgccgatgccgtctcctctcacttcaggagaatcgggtatatatgtttaaccgctatattggacgcgtgacttcactcaccaaatcgatcactcggttttgctttagtgatcgatcgatcaatggatgcaacatgagcttacctgcatgctgctttgcaggggaccaaaaaattcgaccagcaatcttgaagagcttatcagccttgttccttttgacgacgcttattctggcagtcttcgtgaagctgtaaattaatttatcaaatcaaaaccgtgttaaaacttcaaatggaaacataaatatgtgccaaatctttataaatttcgttttgtaaactgcagtggaagcagtggttgatggcatggactgcaaaggagagcagccaggagtcaattgaaggggacacggcaatattgttggttcgtgccatcgagatttttggaggacggcatgttttgaccgggcaaagaccggacctttgggagtattcccagctcgagcagctcacctcctccatctgctgcaaactttccaggagggttcttgcccaggtaaatatttatatgttaacctgaatttttatatacacacaaaacactgtccttttaatcaagttgtacatacaaatacacacaaatacagtaaaacatgcatagtgtttgttataactaaaatacatcccttatgtagtaaaatttttaccgcaagttatatcgttgtaaaatatcttatagtaaaaaacttttactaatcgatactttatagtacaatttttactagctcaatatgccatttgatgattatagtccccgctgtaaaaatttcactaccttggcttttgttagctatggcacatcctggctatggtatagtacttctacaatacacaaacatatataattgttaatttgcaacgatgaaaatatttaactttgattcaggagaatggggaaagtacggagaaagttgaggagatagaccagcaagtggatttggagatgcaggaattgactcggcgcgttctacagggctgcagcgctattaacagactaacccgggagacgtttctccatgtggtgaagagcttctgctatgtcgcctactgctcacctgagacaattgatagccacatcgacaaggtcatattccaagatgtgatttaggaacaaattaccccgactcatctacactccttataaaagagagtagtggtggtgttggttctgccacccccacctccactaccaattcccgacctttatagaataaagatgtgtcttttgtattaagtttgttgtggtgtacctcgtgtttttcctgagacggggtttaatttcgtggcgtttctgaaaggtaatttctgtgtatgatactgaacgccaacga</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001058706.1 RefSeq:Os04g0178300]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 4]]
 
[[Category:Chromosome 4]]
 

Latest revision as of 07:46, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information