Difference between revisions of "Os04g0346000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0346000| Description = Prolyl 4-hydroxylase, alpha subunit domain containing protein| Version = NM_001059046.1 GI:115457821 GeneID:4335530| ...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os04g0346000|
 
−
Description = Prolyl 4-hydroxylase, alpha subunit domain containing protein|
 
−
Version = NM_001059046.1 GI:115457821 GeneID:4335530|
 
−
Length = 6822 bp|
 
−
Definition = Oryza sativa Japonica Group Os04g0346000, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
+
Please input expression information here.
−
AP = Chromosome 4:16470472..16477293|
+
 
−
CDS = 16470619..16470691,16471533..16471580,16471890..16471942,16472904..16472969,16473180..16473254<br>,16473808..16473882,16475013..16475083,16475173..16475224,16475936..16476025<br>,16476834..16476926,16477065..16477172|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008397:16470472..16477293
+
 
−
source=RiceChromosome04
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008397:16470472..16477293
+
 
−
source=RiceChromosome04
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atggggatggcgcgggcgcgggcgcggcggttgctgccgctgctcaccttcgtcacgctcggcatgatcctaggctctttacttcagttagcgtttttccgccggatagatgatcactcaaatgtaacacatttggagaatgatcaagaagcagcttttctccgtctaggattggtgaagcctgaagtcatcagctggtcacctcggataattgtcttccataactttcttagttctgaggagtgtgattatctaagatcaattgctagaccaagactacagatttccactgtagtggatgtcgcaacaggaaagggtgttaaaagtaatgtccgtacaagttctggtatgtttgtgagttctgaagaaagaaagttaccagtcattcagtctatagagaagaggatttctgtgtactctcagatacctgaagaaaatggagaactcatccaagtattacggtatgaaccaagccaatattacaggccacatcatgattacttttctgacactttcaacatcaaacgtgggggccagcgagttgcaacaatgttgatgtatttgactgatggtgttgaagggggtgaaacccattttcctcaggcaggagatggtgaatgtagctgtggcgggaagatggtcaaaggattatgtgtcaagccaaacaaaggagatgctgtgctattttggagcatgggactcgatggtgaaacagactcaaacagcattcatggtgggtgccctgttctggaaggggagaaatggtcagctacgaaatggatgaggcaaaaagaatttgtttga</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MGMARARARRLLPLLTFVTLGMILGSLLQLAFFRRIDDHSNVTH                    LENDQEAAFLRLGLVKPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVA                    TGKGVKSNVRTSSGMFVSSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQY                    YRPHHDYFSDTFNIKRGGQRVATMLMYLTDGVEGGETHFPQAGDGECSCGGKMVKGLC                    VKPNKGDAVLFWSMGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKEFV</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
−
DNA = <dnaseqindica>148..220#1062..1109#1419..1471#2433..2498#2709..2783#3337..3411#4542..4612#4702..4753#5465..5554#6363..6455#6594..6701#aaaaaaaacattaaaaaaaagagaaaaaaaaggccgaggcgaccgggccgcggcccgactccggcgaggtcgtcgaccaaggccgccgagattcgtcgggatttctcgccaaaaatagcaaaggcggcggcggcggcggcggcggggatggggatggcgcgggcgcgggcgcggcggttgctgccgctgctcaccttcgtcacgctcggcatgatcctaggtgagtcgccgtcgtcggctagctagctctgaggaggagcagcacgcgcccgtgtcgatttggggatcagggcgagctctgcctcgccgccgtggggtgctccgcttggttggtttggttgatgcattttttgggggcgggggctgtgttcctcactgtggccatgatttggtcggcgactgatggtttggggtgctgggctgagggctgaatctgacacgcttgggtttgctggatttgatgggaaatagcctgaaaattttgccagttcgtggcttcctgcggctgcagtggaagcatggcaagtgtttggcatggcggcccagtgcctgttgacttgttgccatccgcatggatttcatgatgggcgcagggatgccagccattgtcacttgtgtgtgagccagtggtaagggctagttggtgtgctactgctaatgagctttgattggtctggtttctggtctcgcatcactagctggaagctacttaagtttgagcctacatggtggtgcatgccgtagctcaacatatgagcggtcgaaataattaagctgtacttattcaggtgttcacggtcttatggtactggagcatccgattcagcacagtgtgtcctagcaaattcaagtaaacactatatttgcctttagttttatctgttctggacgaaagattaggcctactgggtcattgagtatagtttatttccattttgctcccttttctgcaaaccttggcactttatttcaattagtattgccattggtcgcgtacaaatttatatgtgctgcttcaatgaaataattgtctcatcttgctttgttctacacaatttcaggctctttacttcagttagcgtttttccgccggatagatgatcactcaagtatgtctatcctcccttttatttattgcattctaataatacatgcgtgcaccttctcctccctctacttccaatataactggaacaaccttgtacttgtcttttgtggcattatgcatatgcttgttattgctcaatccatgtcaaacgaaaaacttttttagtgccagcaattcagttgagcatagggctgcatacctgcatctgagtaaatcaaaatccagagaaccatcaattacatgctatacactttactagtctttcctcggtgattgtgtgtaaccaagcgtgaggcgttctgcatggcagatgtaacacatttggagaatgatcaagaagcagcttttctccgtctaggattggtatgtaatgctactttctgaaatgcttgaggcctaatctgtatatatgccaataattttttttgtaaatttacaacacaaacatcagataaatttggggatttgaagtctattaggcaagtttgaggaataaactgacagtggaaagctagtcttagctttgtttacttctttatatattttgtctattttctacaagtggccagataaaattgacttgattcgtttccaatttcgatatttattaaaaaaaatgagcttcttatatgcgcaaaagtgtgtctgttcattttcaatatcatcttgtgttgtgtgctctggaatttaactgggttttgatcatgttacatgataaaaagaaaattatatctatcaactgcttaatttgcaaaaaggctagcaagttgatttggttcatatgcaattggttggaaaataacagagatgaaatgtcaagtatgatggttcctccattgattatgcatgcagttatgaagtgaactgtgatatggaataggttcttagaactttcttttatcaatataatagatgtaaatttttaatgattgatcaaataggatatagctctatatgtagatgtagaaccatgtaaagctttgttgtgaggtttagcttgagatgtaggaacttttctaaacctttattctgacagggtttagaatctactgaaattgttttctttttttaaaaaaaatggaagaacattctctcagcctctataagctgaaataaaaattttgttcttctttgttgcaagattgtatatcttttgttgaccaatgagcatccattcatgatatggtgtgttttatcagtttcactttgtatgggcaattgagcacgttatttttaaccttttttagtcttcttttgcaacttaatttgtagcaggctcaaaacacaaaaaatctaatgacttcaatttgttcataatctgtaggtgaagcctgaagtcatcagctggtcacctcggataattgtcttccataactttcttagttctgaggttgggccctgtctcttgtagtttggtgttgctaaatatttttcatcagctcttgtatttggtgactcaggcatatacttcccttgctatttgcatgtatccaaagaaaaactgtaagcccaggcaacaacattatatgcataaaccaccaatctggtggacaatggccaaaatagttgttgctgagtatacttgtgctaatctttgcaggagtgtgattatctaagatcaattgctagaccaagactacagatttccactgtagtggatgtcgcaacaggaaaggtacatttcttgccttatacttagaatgtggaatgtctcttagtatctcaatgttagatagctattattttctataatagttgctttctacttcatagcaagtggaaggtacattctctttgtatctaaatattagatagctattattttctataaagttagtagatttataaagttcagatgatagttgataatgtatttctttctttttctatttctaaatctttgtaaaacctttgtgtcaacattcctctcttcatcaaggttgaggaaaaaaaagtttgagcattaatacgatctatttttttggagagaaaactgaggtttttctttttattgtgtgatctgctttatggaaccattcgtaatgtttattaaacgattatttatagctcatatttctcaaatggttctgaggattttgctgttggcaatcatagaaccctcatctattgggtttttttgtagttctctatttctgaaaccccggaaatatttttcatgtccttttaatatttcggttattgctaacttggcatattttgtggaacagggtgttaaaagtaatgtccgtacaagttctggtatgtttgtgagttctgaagaaagaaagttaccagtcattcaggtccgttcatcataccccaactgtaggtgccttactccttgccgcttattgcttcatgtgaaaaattccctttatactgttgagagaaataacttggtcttctcaggatatgtctgtactgcaacaaattactttgtgagggggggggggggtgttaattggttgttaagttgccattacttgacaccacaaatacaagagtatgtttattgggtggctagaaacgggtcatcttctcttcatatttcataagtttgacataaaaaatgatattatcattcgtttcctaaattgactgcattgtttagtttaaaatcaacatacaaaatgggccacacctagactgccatttaactactttgtccttttcttttatctgttaggtcaaaagaagaagaatgtatgagattttcctcgctcctaattttagattcaaactaaggtactagtacatcctatttagaaattgaaccaaaatttggtactgatataattttgcgattatttattatttgtctattacaacgtcaaaataaaaccaaaaccatggacctaaaaggttatgtagaactaacataccttttgtatcaatgcaaaagttatgctaatagaatttgtagcttctgttcgtgttgccaaaagtaccagcaacagcacatgacatatacttagaaatatttttggcggcaatgaaactctgattcctgacatggtacttatggatcaaactgtttccttttatggcatggtccctctaacaaaaaatgtagcttgtgtttattcctactccaccaatgtcaactactcacttaatgtataaaatctgacaaattccctgaactactgcaatacagaagtagctgacatatatttatgttatatttctgtggtaatcctgaaaaattttaacggtgcattttaatgcaccgttaatggataatttcacaggaaattttggcttttgctgacactattacctaattatgctatcaaattatccaacaatgcatcatccattgctttaaattgcccttgtcacatgttcgactgaaatctgtgtcagtgggtttaaaccttagtagttgaatacttcattcttctatcattaatgtttgctttgctttctccagtctatagagaagaggatttctgtgtactctcagatacctgaagaaaatggagaactcatccaagtattacggtactagaataaccgacagtattttttcccctaagttctttgccttgattattaatcaatcattttcaagctaacttcaagtactacaggtatgaaccaagccaatattacaggccacatcatgattacttttctgacactgtaagttgaactccctttatatgctatggagagcagagagctatagtttcctttgccgtcactaggctagtcattacctccgtttttaaatagacggcgctgttgacttttggatatgatgtttgaccattcgtctgttcaaaaaggctatgtaaatatcatttatttcattattccttgttttatcattaaaggtattttaagcatgacttatatttttgcatatttgcactaaaattttaaataagatgaatggttaaacgtcatgtccaaaagtcaacaacgccatttatttaaaaacagtgggagtagtagtagtagtagtacatttaaccaaggaaaaagcccacttttggcccttcagctctttctgtcgacaatgaaggggaaaagaggaaaaggtggctaacatgttaaacgtcttatgaattttcttatccaaatcatcatctatagccagctcaagtgccagctaagatgacacgtcaagcaaaaatgcccacaagatctactttggggtttgatttgacgagttttgatgttagaaaatgtaataaagttgggtttgaatttagggtggattagtgggaactatagtctgaaaagcttagagaccaagagtgcatttttcatttaactagcaatgcaaatcaataaaaccatcccccgcaaaaaaaaaaatcaataaaaccatgaatatttaatctgcagttcaacatcaaacgtgggggccagcgagttgcaacaatgttgatgtatttgactgatggtgttgaagggggtgaaacccattttcctcaggttagctgaattatactgacatagcttcttacaatatcaaaagctctgtacatttttcttctggttcagctttacttatgtttgctcatttatgccatagttctttccttggatcttatcagcacaaaatgtggtcaagtgccactctttgttgtgcagcacattcacgctatcttttttatttccatgtttctcttgaatatgtaaaaattattgaaacaatttatgaacatgtatctgttgtctatacaaaccatgtgatactagtatactattggttatcactgagcactgtagctgtctggaaaaatttttcctggctaacaaaagcgccattcttttttggcatactcctaagtcatagctgtaccagcagataactttttcatgcttcaagggaaactactgaatccactggaggaattggttgtgttgattatggtaacatcagcttacaactcgacctctgtgctctcatatggccacaataactgcattggcaatgtggaatgcaatcctaagaacaacgcaatatgtaattggcctcatagttgatctgtcagatgtttaaggcccttgagttcaaattatctttgaatctcatttttaggtgaataaccctttgcatgagcaatttgcagccatgctttcccagccttaggttcttctttcctcgtttacacatcttctgatacatggcatgatgtaacatgtcgtggggctgcttcatccgtctttgtttagcttttatgttatatgatttgtggtgtgcttgcctgatattctgaatttatcacctctgttccaggcaggagatggtgaatgtagctgtggcgggaagatggtcaaaggattatgtgtcaagccaaacaaaggagatgctgtgctattttggagcatggtgtgttataatttgttctagataaagcatgaaccaaaacacattccattgtcattagatccagatattttcttaaattgtcagtgctccgttagtcaactaatttcttcggcttccatgctaatttgattgtttcagggactcgatggtgaaacagactcaaacagcattcatggtgggtgccctgttctggaaggggagaaatggtcagctacgaaatggatgaggcaaaaagaatttgtttgagcgaaagatgaggcgaagaatgatgccttctaatttctggctatgcagatatggagctatattctttctattatatgtaatgaaacgtttcaggaatcttgcaagcatatgaaagttcaat</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059046.1 RefSeq:Os04g0346000]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 4]]
 
−
[[Category:Chromosome 4]]
 

Latest revision as of 07:50, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information