Difference between revisions of "Os04g0442000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0442000| Description = Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)| Version = NM_001059414.1 GI:115458557 GeneID:433...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
{{JaponicaGene|
+
Please input one-sentence summary here.
GeneName = Os04g0442000|
 
Description = Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)|
 
Version = NM_001059414.1 GI:115458557 GeneID:4335934|
 
Length = 5614 bp|
 
Definition = Oryza sativa Japonica Group Os04g0442000, complete gene.|
 
Source = Oryza sativa Japonica Group
 
  
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
|
+
===Expression===
Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
+
Please input expression information here.
AP = Chromosome 4:22028626..22034239|
+
 
CDS = 22029017..22029059,22029746..22029861,22029989..22030084,22030205..22030261,22030444..22030596<br>,22030730..22030814,22031073..22031163,22031300..22031464,22031789..22031908<br>,22031996..22032080,22032210..22032378,22032677..22033149,22033226..22033416<br>,22033506..22033683|
+
===Evolution===
GCID = <gbrowseImage1>
+
Please input evolution information here.
name=NC_008397:22028626..22034239
+
 
source=RiceChromosome04
+
You can also add sub-section(s) at will.
preset=GeneLocation
+
 
</gbrowseImage1>|
+
==Labs working on this gene==
GSID = <gbrowseImage2>
+
Please input related labs here.
name=NC_008397:22028626..22034239
+
 
source=RiceChromosome04
+
==References==
preset=GeneLocation
+
Please input cited references here.
</gbrowseImage2>|
+
 
CDNA = <cdnaseq>atggccgccgcgatggagatggcggcgaatccaggtggttcaggaacctgcagcgatgcactattccgggagctatggcatgcttgtgctggtccgttggtcacggtcccgaagcgcggcgagcgcgtctactactttccccagggtcatatggaacagcttgaggcgtctacaaaccagcagcttgaccagtacctgccgatgttcaatctaccatccaagatcctatgcagcgtggtcaacgtagaactccgggcggaggctgattcagatgaagtttatgctcaaattatgctgcaaccagaagctgatcaaagtgaactcaccagtctggatcctgagcttcaagatcttgagaaatgcacagctcattccttttgcaagacattaacagcttcagatacaagcacacatggcggtttctctgttcttaggaggcatgctgaagaatgccttcctcagctggacatgtctcagaatccaccatgtcaagaactggttgccaaagatctccatggaactgagtggcatttccgtcacatctttcgtggacaacctaggaggcatctgcttacaaccggttggagtgtctttgttagctcaaaaagattggttgctggcgatgcatttatcttcctgaggggcgaaagtggtgagctacgggttggagtaaggagacttatgagacaagtaaataacatgccatcatctgtcatatcaagccacagcatgcatcttggagtccttgcaacagcttcccatgctatctccactggaaccctcttttctgttttctacaaacccagaacaagccggtctgagtttgttgtgagcgttaacaagtaccttgaagctaagaagcagaacttgtctgttggaatgaggtttaagatgagatttgaaggtgatgaagctcctgaaagaaggtttagtggaacaattattggtattgggagtgtgccagcaatgtcaaaatctccatgggcagattctgactggaaatctctgaaggtccaatgggatgaaccttcggctattgtccgtccagatagagtttcaccatgggaactggaaccattggatgcgagtaatccacaaccacctcagcctccattgaggaataagcgtgcaaggcctccagcttcaccttctgtggttgcggaacttcctccaagtttcggactatggaaacccccatctgaagcagcccaaactctctcattttcggaaccacaacgggctcgagagatatttccttcaattcctgcatcaatcttctcagcatcatcacatgttgaattcaattcaaagaacgagccatccatactaagcaatcagttctactggtcaatgagggattcaaaaactgattctttttctgctagcactaacaaaacaagagttgaaagaaagcaagaaccaactactatgggttgcagattatttggaattgaaataagctcagctgtagaagaagccctgcctgcagctactgtttcaggtgtcggttatgatcaaactgttctctctgtagatgtggactctgatcagatctcacagccatctaatggcaataaatccgatgcccctggaacaagcagtgaacgttctcctcttgagtcccaaagtcgtcaagtgaggagctgcacaaaggtaattatgcaaggtatggcagttgggagggctgtggacttgacaaaactaaatggttatggtgatcttcgcagcaagttggaggagatgtttgatatacagggggacttgtgtcccaccctgaagagatggcaagttgtttacaccgatgatgaggatgacatgatgcttgtcggggatgatccttgggatgaattttgtagcatggtgaaacggatttatatttactcctacgaggaggccaagctgctggctccaaagtctaagctgccagtcataggtgacaccatcaaattgagcagtatgaactcatcacatgaatccgtcgacctggacaatcatgcctcagttactaacagggactgctaa</cdnaseq>|
+
==Structured Information==
AA = <aaseq>MAAAMEMAANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVY                    YFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPE                    ADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQN                    PPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESG                    ELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFV                    VSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWK                    SLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRARPPASPSVVAELPPS                    FGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNEPSILSNQFYWS                    MRDSKTDSFSASTNKTRVERKQEPTTMGCRLFGIEISSAVEEALPAATVSGVGYDQTV                    LSVDVDSDQISQPSNGNKSDAPGTSSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLT                    KLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRI                    YIYSYEEAKLLAPKSKLPVIGDTIKLSSMNSSHESVDLDNHASVTNRDC</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
DNA = <dnaseqindica>392..434#1121..1236#1364..1459#1580..1636#1819..1971#2105..2189#2448..2538#2675..2839#3164..3283#3371..3455#3585..3753#4052..4524#4601..4791#4881..5058#caaaagcctcaaagcccaagagaccagggcggctacctcctcctcctaccaccaccgccaccactagtccccccccctcccccttcagccaaagcctgcgactatccgcaacctcaacctcaacctcacgcagctcccgcgccaaccgcgacctcccggatccggccacgccgcccttttccggcgagatccacctgcgggaattccgtggttgttggaggcgccgcggccgatacagggcggggtgcggttagatccatggagatatggagatggagctgagctgagctagcagcggtagtacagatcgtggctcgcgcgtggcgtccctgtccgttggttcccggcgggtggtgcttttgggaggagtcgaggaggaggaggaggaggcatggccgccgcgatggagatggcggcgaatccaggtggttcaggttcgagttcgtgcctctcccacccatcgccgcatttcccggtggagttttttcttgccccccttttttccggtagccgccgggctgtggcctggttgaaatttttggcggtgctttggcgtggaaaagtttggttcgtttgagaccgagacaatagttgatttgagtggacttgagtagttgactggcttgtgtgttgaaaaggtgccgaaatttccctctaattttgagccgatgtcaccgaaccaaaacgagaaaaattaggcaatccgttcccttctttttttgcttgatgagtagttgttgtcacccttgctgatatgggtaaactctttgttcccacgatttatgatgtttgtgtgatatttttttttgtttatttagttccgtaattcgatgcttctgaattgtgatccgtcaaataggaaaagccgattgatgttttcgctgctaattttgttcgattgtttcagtttagtttgtaggtgatgcattttttttttgtggctagtttagctgatgaattggcgcttctctgctgatgataaactgtgtcggtttagtggatctttgttcgcttcaactatgtttaggatttctcataatttatcaaacttgttttctcaattcgtctttcttgttctgatgactcaattttgttttgcgattcaattgtttctgtgtaggaacctgcagcgatgcactattccgggagctatggcatgcttgtgctggtccgttggtcacggtcccgaagcgcggcgagcgcgtctactactttccccagggtcatatggaacaggtgctcaccgatcggcttgatctacgagttcttcatgccaaatctcatcgattaaactttttttttacttagtttacgttttttttttcacctcaaaggctcaaactgatcacggtttgttctatagcttgaggcgtctacaaaccagcagcttgaccagtacctgccgatgttcaatctaccatccaagatcctatgcagcgtggtcaacgtagaactccgggtcagtgtttctttaatctgtctggtgtaacctcccatgtgagtgtgctggaaatcgccagtccggttactgtagctcgaaatattattcaatgcttaccggttgagttctgcaatgcaggcggaggctgattcagatgaagtttatgctcaaattatgctgcaaccagaagctgatgtgagtatattctctacccccctgccaatatgtaaggggggatatatattgcttttgcaatgcatgctatattgctactgtagtatttctactttcttattgtagcagcctttaatggttataaatcatgtccttttgtcattcacattgattgatttgtttgcttgcatttgcttgttcagcaaagtgaactcaccagtctggatcctgagcttcaagatcttgagaaatgcacagctcattccttttgcaagacattaacagcttcagatacaagcacacatggcggtttctctgttcttaggaggcatgctgaagaatgccttcctcagctggttagtattaaaagcatattatgtctccacaggttgttaagattgttatatccaagtgtcaaatatcttcttgagttctcgtatgtagcagtaccagtttatgatattattgaatagtgtggttgctttgcaggacatgtctcagaatccaccatgtcaagaactggttgccaaagatctccatggaactgagtggcatttccgtcacatctttcgtggttagcttgaatcttatcattcgggtgttctgttatgctttcaataaaagcagggccagccatgtgtggtctaaaaaaaatctcatcatttggcatgattcttccaatcttgttggcactatgttgtccttattattttggtgtaacactttatttctcagccacacatgctcaccattgtgtagtagcatgtggaatatataagctgtatatcactttcaggatcgcaatctcatatctttccatttttttttacaggacaacctaggaggcatctgcttacaaccggttggagtgtctttgttagctcaaaaagattggttgctggcgatgcatttatcttcctgaggtacacaatactaagcatgtaacttgaaggcattaggtgcacttgcatctatctcatgactcaatttagttgcggatgaatctagtctacagttattactggtttcttccgctaaatatcgttgaataactttcaggggcgaaagtggtgagctacgggttggagtaaggagacttatgagacaagtaaataacatgccatcatctgtcatatcaagccacagcatgcatcttggagtccttgcaacagcttcccatgctatctccactggaaccctcttttctgttttctacaaacccaggttcaataaattctcattttggttatgccctttgtttctggttctttattgtattgagttatggtgcaaattttaatagtaatggttgacgtttagacctatataaaactgaattactgaaatatggcattattggaatattgtttactctgctgagtgtatgatcattataaaaataaacttatgtatgatgatttacccatccagtcatgcattgtttttgataaagtggagtaatacttgggttatcctaattagcattatgatgtgcaagtttacattatcttgcagactaaacttaatgtacatctattatgttcccagaacaagccggtctgagtttgttgtgagcgttaacaagtaccttgaagctaagaagcagaacttgtctgttggaatgaggtttaagatgagatttgaaggtgatgaagctcctgaaagaaggtacaatcttgagtttctttctgcataattatgctagctttactcctgtagtttacggtgcatatcataaacatttctgtttcacaggtttagtggaacaattattggtattgggagtgtgccagcaatgtcaaaatctccatgggcagattctgactggaaatctctgaaggtaattcatattttagttttgaattttgatggttaaattggaagatacttttttgagatgttttttgtccacttatgtcttggtctcttggttggtccagatctgattctgtcctgtaattattcgtaggtccaatgggatgaaccttcggctattgtccgtccagatagagtttcaccatgggaactggaaccattggatgcgagtaatccacaaccacctcagcctccattgaggaataagcgtgcaaggcctccagcttcaccttctgtggttgcggaacttcctccaagtttcggtaagaatgaagtcctgaacacctgtgacaattatggttctgattcttgattacaaggctcaggtcatagttggtgcacataaacttttatataacttactccctccgttttacaatgtaagactttctagcattgttcacattcatatagatgctaatgaatttatatatataataatgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttatattgtgaaaccgaggaagtagtgtattatccagcttaacatttcaatgctggtgcgacttacatcaggactatggaaacccccatctgaagcagcccaaactctctcattttcggaaccacaacgggctcgagagatatttccttcaattcctgcatcaatcttctcagcatcatcacatgttgaattcaattcaaagaacgagccatccatactaagcaatcagttctactggtcaatgagggattcaaaaactgattctttttctgctagcactaacaaaacaagagttgaaagaaagcaagaaccaactactatgggttgcagattatttggaattgaaataagctcagctgtagaagaagccctgcctgcagctactgtttcaggtgtcggttatgatcaaactgttctctctgtagatgtggactctgatcagatctcacagccatctaatggcaataaatccgatgcccctggaacaagcagtgaacgttctcctcttgagtcccaaagtcgtcaagtgaggagctgcacaaaggtgagagtttgtcacgttatttccattttcaagatgctgaagcatacaaagaacttaattacttttccttgtgcaggtaattatgcaaggtatggcagttgggagggctgtggacttgacaaaactaaatggttatggtgatcttcgcagcaagttggaggagatgtttgatatacagggggacttgtgtcccaccctgaagagatggcaagttgtttacaccgatgatgaggatgacatgatgcttgtcggggatgatccttgggagtaagaatctttacctcttcacatttgtatatttgatgcaagtttttggcatcaaagttctaatctgatggtaatgcatgttgttgcagtgaattttgtagcatggtgaaacggatttatatttactcctacgaggaggccaagctgctggctccaaagtctaagctgccagtcataggtgacaccatcaaattgagcagtatgaactcatcacatgaatccgtcgacctggacaatcatgcctcagttactaacagggactgctaaccattgactttgccctaattctgatatgatcatttgaggaaattccaatgtttcttcattactgcttcctgtgctgaagacgcaacgcccttttgtcttgaattgtggtggtatttgaactgcaagtgccaggaagttcccaagactggcaagaccgcctggaagaggcattctggcaaatgcatgccgttccaaattgttttgtgttttggtaggagccttggcgttcttgtctggtgcccagatttaggtaagaagtcctgaacaccaagattgatgacgcttcggccctctccccgttgcttaggagtaaataggatttgcatatgtatatatagtatcattaggattcctgattgcctgctattgtgattccaagtaatttggatgcattaatgcaattattattcagtaattgttatttttagcagcaaacctgtgagtgatggtggtggatgtgttgatcttgcagcatttgctacctttctctccattgtggaagccatctgtacataaacaaactactatcaaataagtaatgttgtgctttctaacc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059414.1 RefSeq:Os04g0442000]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 4]]
 
[[Category:Chromosome 4]]
 

Latest revision as of 07:54, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information