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| − | Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)
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| − | == Annotated Information ==
| + | Please input one-sentence summary here. |
| − | === Function ===
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| − | Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)
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| | | | |
| | + | ==Annotated Information== |
| | + | ===Function=== |
| | + | Please input function information here. |
| | | | |
| − | === Gene type=== | + | ===Expression=== |
| − | protein coding
| + | Please input expression information here. |
| | | | |
| − | === Lineage=== | + | ===Evolution=== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza
| + | Please input evolution information here. |
| | | | |
| | + | You can also add sub-section(s) at will. |
| | | | |
| − | === Evolution === | + | ==Labs working on this gene== |
| − | This gene is conserved in ''Arabidopsis'' (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to
| + | Please input related labs here. |
| − | GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis <ref name="ref1" /><ref name="ref2" />.
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| − | === Knowledge Extension === | + | ==References== |
| | + | Please input cited references here. |
| | | | |
| − | PROVISIONAL REFSEQ: This record has not yet been subject to final
| + | ==Structured Information== |
| − | NCBI review. The reference sequence is identical to AP008218.
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]] |
| − | On Jun 7, 2010 this sequence version replaced gi:115489835.
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| − | The IRGSP pseudomolecules (Build 4.0).
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| − | The orientation of the sequence is the short arm to the long arm of
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| − | the chromosome.
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| − | Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,
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| − | Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14
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| − |
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| − | The position of gaps in this pseudomolecule with unknown size is
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| − | assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.
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| − |
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| − | This sequence entry was annotated by the Rice Annotation Project.
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| − | http://rapdb.lab.nig.ac.jp/
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| − | == References ==
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| − | <references>
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| − | <ref name="ref1">The Rice Annotation Project Database (RAP-DB): 2008 update.
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| − | Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,</ref>
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| − | <ref name="ref2">Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.
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| − | Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,</ref>
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| − | | |
| − | == Structured Information == | |
| − | {{JaponicaGene|
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| − | GeneName = Os12g0105300|
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| − | | |
| − | GeneID:9268278|
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| − | Length = 8411 bp|
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| − | Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|
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| − | Source = Oryza sativa Japonica Group
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| − | | |
| − | ORGANISM Oryza sativa Japonica Group
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| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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| − | clade; Ehrhartoideae; Oryzeae; Oryza.
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| − | |
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| − | Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
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| − | AP = Chromosome 12:259563..260472|
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| − | CDS = 40138313..40138869,40138972..40139293,40140765..40141055|
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| − | GCID = <gbrowseImage1>
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| − | name=NC_008394:40138313..40141055
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage1>|
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| − | GSID = <gbrowseImage2>
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| − | name=NC_008394:40138313..40141055
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| − | source=RiceChromosome01
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| − | preset=GeneLocation
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| − | </gbrowseImage2>|
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| − | DNA
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| − | >Os12g0105300 class=Sequence position=chr12:272660..281070 (- strand)
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| − | GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC
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| − | TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG
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| − | CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC
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| − | CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC
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| − | TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA
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| − | TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT
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| − | GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC
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| − | AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA
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| − | TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG
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| − | CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA
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| − | ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA
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| − | ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG
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| − | AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA
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| − | CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA
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| − | AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG
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| − | CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT
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| − | CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC
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| − | AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC
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| − | TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC
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| − | ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt
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| − | acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg
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| − | ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac
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| − | aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg
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| − | ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa
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| − | gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga
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| − | gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac
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| − | aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat
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| − | tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct
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| − | tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt
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| − | tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg
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| − | ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc
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| − | cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt
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| − | cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc
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| − | ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat
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| − | ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta
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| − | gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag
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| − | ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag
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| − | gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg
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| − | agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc
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| − | taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg
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| − | gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac
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| − | gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta
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| − | aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct
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| − | gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc
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| − | tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg
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| − | aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag
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| − | tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca
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| − | atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc
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| − | ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca
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| − | atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat
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| − | tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt
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| − | taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct
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| − | gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt
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| − | agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc
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| − | gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg
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| − | cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa
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| − | gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA
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| − | ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC
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| − | TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA
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| − | CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC
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| − | CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC
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| − | TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC
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| − | CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA
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| − | ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG
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| − | CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT
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| − | CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC
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| − | AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA
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| − | TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC
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| − | ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC
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| − | AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA
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| − | TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA
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| − | AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG
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| − | CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG
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| − | TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA
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| − | AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA
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| − | GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA
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| − | ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT
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| − | CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG
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| − | ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA
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| − | CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA
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| − | TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT
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| − | CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT
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| − | CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA
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| − | GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA
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| − | CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT
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| − | TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC
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| − | ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT
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| − | AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC
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| − | ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta
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| − | gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt
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| − | attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat
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| − | attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga
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| − | actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc
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| − | taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat
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| − | tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct
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| − | tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt
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| − | attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta
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| − | attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt
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| − | cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa
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| − | tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat
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| − | aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA
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| − | CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG
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| − | GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT
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| − | GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA
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| − | TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT
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| − | TCTTTGTATT T</dnaseqindica>|
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| − | Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|
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| − | }}
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| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
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| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]]
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| − | [[Category:Japonica Chromosome 12]] | |
| − | [[Category:Chromosome 12]]
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