Difference between revisions of "Chalk5"

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{{Mitochondrion|
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Please input one-sentence summary here.
 +
 
 +
==Annotated Information==
 +
===Function===
 +
Chalk5 influences grain chalkiness, which also affects head rice yield and many other quality traits. Chalk5 encodes a vacuolar H+-translocating pyrophosphatase (V-PPase) with inorganic pyrophosphate (PPi) hydrolysis and H+-translocation activity.Elevated expression of Chalk5 increases the chalkiness of the endosperm, putatively by disturbing the pH homeostasis of the endomembrane trafficking system in developing seeds, which affects the biogenesis of protein bodies and is coupled with a great increase in small vesicle-like structures, thus forming air spaces among endosperm storage substances and resulting in chalky grain.
 +
The elevated activity of Chalk5 increases the proton concentration and promotes water loss, which could disturb pH homeostasis in the endomembrane trafficking system of developing endosperms, resulting in a great increase in small vesicle-like structures coupled with an abnormal decrease in protein body number and size, causing the formation of air spaces among starch granules and protein bodies and thus aberrant shape and spatial arrangements of these storage substances, leading to chalky grain.
 +
 
 +
 
 +
{| align=center
 +
|-
 +
| <gallery>
 +
File:Ng.2923-F2.jpg
 +
File:Ng.2923-F4.jpg
 +
File:未标题-1.jpg
 +
 
 +
</gallery>
 +
|}
 +
 
 +
===Expression===
 +
Two consensus nucleotide polymorphisms in the Chalk5 promoter in rice varieties might partly account for the differences in Chalk5 mRNA levels that contribute to natural variation in grain chalkiness.
 +
 
 +
===Evolution===
 +
Please input evolution information here.
 +
 
 +
You can also add sub-section(s) at will.
 +
 
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 
 +
==References==
 +
Li Yibo,Fan Chuchuan,Xing Yongzhong etc.Chalk5 encodes a vacuolar H+-translocating pyrophosphatase influencing grain chalkiness in rice,Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2014/04/46(4):1061-4036
 +
 
 +
==Structured Information==
 +
{{IndicaGene|
 
GeneName = chalk5|
 
GeneName = chalk5|
−
Annotated Information = protein coding; the gene of protein chalk5(ATP synthase F0 subunit 1).|
+
Description = Putative uncharacterized protein|
−
Function = influences grain chalkiness, which also affects head rice yield and many other quality traits. Chalk5 encodes a vacuolar H+-translocating pyrophosphatase (V-PPase) with inorganic pyrophosphate (PPi) hydrolysis and H+-translocation activity. Elevated expression of Chalk5 increases the chalkiness
+
Definition = Oryza sativa Indica Group BGIOSGA000079, complete gene.|
−
of the endosperm, putatively by disturbing the pH homeostasis of the endomembrane trafficking system in developing seeds,which affects the biogenesis of protein bodies and is coupled with a great increase in small vesicle-like structures,thus forming air spaces among endosperm storage substances and resulting in chalky grain. |
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tag = chalk5|
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Expression =Two consensus nucleotide polymorphisms in the Chalk5 promoter in rice varieties might partly account for the differences in Chalk5 mRNA levels that contribute to natural variation ingrain chalkiness.|
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tid = BGIOSGA000079-TA|
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Evolution = R1c might have evolved from R1b through elimination of its partial segments at the end containing the atp1 gene, which was integrated in the soybean genome at another location.The mitochondrial DNA is more conservative and the evolution rate of chloroplast DNA is higher than mitochondrial DNA in rice.|
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pid = BGIOSGA000079-PA|
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Labs wodking on this gene = Laboratory of Plant Molecular Genetics; Key Laboratory of Crop Heterosis and Utilization of Ministry of Education; Beijing Key Laboratory of Crop Genetic Improvement; Key Laboratory of MOE for Plant Developmental Biology; State Key Laboratory of Pharmaceutical Biotechnology; Key Laboratory of Tea Biochemistry and Biotechnology; MOE Key Laboratory of Bioinformatics and Bioinformatics Div. TNLIST.|
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Length = 2622|
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References =AU  - Li, Yibo, Fan, Chuchuan, Xing, Yongzhongetc. Chalk5 encodes a vacuolar H+-translocating pyrophosphatase influencing grain chalkiness in rice
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Source = Oryza sativa Indica Group
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Nat Genet 2014/04//print Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.1061-4036
 
−
 
 
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Structured information = The product of the gene is the subunit of the ATP synthase F0(ATP synthase F0 subunit 1)
 
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Description = ATP synthase F0 subunit 1|
 
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Version = GeneID:6450183|
 
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Length = 1530 bp|
 
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Definition = Oryza sativa Japonica Group ''atp1'', Mitochondrion gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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   ORGANISM  Oryza sativa Japonica Group
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   ORGANISM  Oryza sativa Indica Group
 
             Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
             Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
             Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
             Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
             clade; Ehrhartoideae; Oryzeae; Oryza.
 
             clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
|
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Chromosome = [[:category:Japonica Mitochondrion|Mitochondrion]]|
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Chromosome = [[:category:Indica Chromosome 1|Chromosome 5]]|
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AP = Mitochondrion:352379..353908|
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AP = Chromosome 5:46289509..46292130|
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CDS = 352379..353908|
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CDS = 46291834..46292130,46291618..46291722,46291453..46291526,46291309..46291367,46290712..46290749<br>,46290433..46290553,46290270..46290338,46290093..46290175,46289861..46289929<br>,46289709..46289771,46289509..46289622|
−
GCID = <gbrowseImage1>
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GCID =</Ng.2923-F1.jpg>
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name=NC_011033:352379..353908
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name=IndicaChromosome01:46289509..46292130
−
source=Rice_Japonica_Mitochondrion
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source=RiceIndica01
 
preset=GeneLocation
 
preset=GeneLocation
 
</gbrowseImage1>|
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
GSID = <gbrowseImage2>
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name=NC_011033:352379..353908
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name=IndicaChromosome01:46289509..46292130
−
source=Rice_Japonica_Mitochondrion
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source=RiceIndica01
 
preset=GeneLocation
 
preset=GeneLocation
 
</gbrowseImage2>|
 
</gbrowseImage2>|
−
AA = <aaseq>MEFSPRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVSKQPQYEPLPIEKQIVVIYAAVNGFCDRMPLDRISQYEKAILSTINPELLKSFNEKGGLTNERKIELDAFLKQTAKEIN</aaseq>|
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CDNA = <cdnaseq>ATGGCGGCACACTCCCACGTCATCCCCTTCCTCTCCCCGGCGGCGACGTCCGCGCGCTGCTCCCCCTACGGCCACCGCCGCCGCGGCCGCGCGGGGCTCCTGCGGTGCGCGGCGGCGGCGGGGCAGGCGGGGTTCTTCACCCGCCTGGGACGCCTCATCCAGGAGAAGGCCAAGAGCGACGTCGAGAAGCTCTTCTCCGGCTTCTCCAAGACCCGCGAGAGCCTCTCCGTCGTCGACGAGCTCCTCACCTACTGGAACCTCGCCGACACCGACCGCGTCCTCGACGAGCTCGAGGAGGCTCTGCTGGTGTCGGATTTTGGCCCCAAGATTTCGTTCCGGATCGTGGACACTCTACGCGAGGAAATCCGCGATGGCAAGCTCAAGTCTGGGGCTGAGATAAAGGAAGCGCTGAAAAGGTGTATTCTTGAACTGCTGACGAGCAAAGGCGGCAATCCGGAGCTGCAGCTCGGTTTCAGAAAGCCGGCAGTTATCATGATTGTGGGAGTGAATGGAGGTGGAAAGACTACCTCATTAGGAAAACTTGCTTACAGATTCAAGAATGAAGGAGTGAAGGTATTGATGGCAGCAGGTGATACCTTCAGAGCAGCAGCTCGTGACCAGCTAGAAGTTTGGGCAGAGAGAACAGGTTCAGAGATTGTTATCGATAATGATAAGAAAGCAAAACCTGCATCAGTTCTCTCGCAGGCAGTGAAGCGCGGGAAGCGTGAAGGATTTGATCTTGTTCTTTGCGACACGTCAGGACGACTTCATACAAATTATGGTCTGATGGAAGAATTGGTTTCCTGCAAGAAAGTCATAGCTAAAGCCCTTCCGGGTGCTCCTAATGAGATCTTGCTGGTTCTGGATGGCACGACTGGCTTGAATATGCTACAACAAGCGAGGGAGTTCAATGATGTTGTTGGAGTCACAGGATTCGTCCTAACAAAGCTTGATGGAACTGCTCGTGGTGGTTGTGTGGTTAGCGTTGTAGATGAACTTGGAATTCCAGTAAAGTTTATTGGTGTTGGTGAAGGGATGGAGGATCTTCAGCCTTTTGATGCTGAGGCATTTGTTGAAGCCATTTTTCCTTGA</cdnaseq>|
−
DNA = <dnaseqindica>1..1530#atggaattctcacccagagctgcggaactcacgactctattagaaagtagaatgaccaacttttacacgaattttcaagtggatgagatcggtcgagtggtctcagttggagatgggattgcacgtgtttatggattgaacgagattcaagctggagaaatggtggaatttgccagcggtgtgaaaggaatagccttgaatcttgagaatgagaatgtaggtattgttgtctttggtagtgataccgctattaaagaaggagatcttgtcaagcgcactggatctattgtggatgttcctgcgggaaaggccatgttaggccgtgtggtcgacgccttgggagtacctattgatggaaaaggggctctaagcgatcacgaacgaagacgtgtcgaagtgaaagccccagggattattgaacgtaaatctgtgcacgaacccatgcaaacaggcttaaaagcagtggatagcctggttcctataggccgtggtcaacgagaacttataatcggggacagacaaactggaaaaacagcaatagctatcgatactatattaaaccaaaagcaaatgaactcaaggggcacaaatgagagtgagacattgtattgtgtctatgttgcgattggacaaaaacgctcgactgtggcacaattagttcaaattctttcagaagcgaatgctttggaatattccattcttgtagcagccaccgcttcggatcctgctcctctgcaatttctggccccatattcagggtgtgccatgggggaatatttccgcgataatggaatgcacgcattaattatatatgatgatctaagtaaacaggcggtggcatatcgacaaatgtcattattgttacgccgaccaccaggccgtgaggctttcccaggggatgttttctatttacattcccgtctcttagaaagagccgctaaacgatcggaccagacaggtgcaggtagcttgactgcgttacccgtgattgaaacacaagctggagacgtatcggcctatatccccaccaatgtgatctccattacagatggacaaatctgtttggaaacagagctcttttatcgcggaattagacctgctattaacgttggcttatccgtcagtcgcgtcgggtctgccgctcagttgaaagctatgaaacaagtctgcggtagttcaaaactggaattggcacaatatcgcgaagtggccgccttcgctcaatttgggtcagaccttgatgctgcgactcaggcattactcaatagaggtgcaaggcttacagaagtgcccaaacaaccacaatatgaaccacttccaattgaaaaacaaattgttgtgatttatgctgctgtcaacggcttctgtgatcgaatgccactagacagaatttctcaatatgaaaaagccattctaagtactattaatccagaattactaaaatccttcaacgaaaaagggggattaactaacgaaagaaagattgaacctgatgcttctttaaaacaaactgcgaaggagattaattag</dnaseqindica>|
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AA = <aaseq>MAAHSHVIPFLSPAATSARCSPYGHRRRGRAGLLRCAAAAGQAGFFTRLGRLIQEKAKSDVEKLFSGFSKTRESLSVVDELLTYWNLADTDRVLDELEEALLVSDFGPKISFRIVDTLREEIRDGKLKSGAEIKEALKRCILELLTSKGGNPELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRFKNEGVKVLMAAGDTFRAAARDQLEVWAERTGSEIVIDNDKKAKPASVLSQAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAREFNDVVGVTGFVLTKLDGTARGGCVVSVVDELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP</aaseq>|
−
Link = [http://www.ncbi.nlm.nih.gov/gene?term=6450183 NCBI Gene:atp1]
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DNA = <dnaseqindica>1..297#409..513#605..678#764..822#1382..1419#1578..1698#1793..1861#1956..2038#2202..2270#2360..2422#2509..2622#ATGGCGGCACACTCCCACGTCATCCCCTTCCTCTCCCCGGCGGCGACGTCCGCGCGCTGCTCCCCCTACGGCCACCGCCGCCGCGGCCGCGCGGGGCTCCTGCGGTGCGCGGCGGCGGCGGGGCAGGCGGGGTTCTTCACCCGCCTGGGACGCCTCATCCAGGAGAAGGCCAAGAGCGACGTCGAGAAGCTCTTCTCCGGCTTCTCCAAGACCCGCGAGAGCCTCTCCGTCGTCGACGAGCTCCTCACCTACTGGAACCTCGCCGACACCGACCGCGTCCTCGACGAGCTCGAGGAGGCGCGTCCCCTGCTCCACTGCTCTGCATGCTGTTCTCTCCTTCTTCACTGTTCGGCGCTGCTTCTGTCTTCGTTTTTTTTGAATGTTTCCTGCTTGGTCTCGTGCACGCAGGCTCTGCTGGTGTCGGATTTTGGCCCCAAGATTTCGTTCCGGATCGTGGACACTCTACGCGAGGAAATCCGCGATGGCAAGCTCAAGTCTGGGGCTGAGATAAAGGTCATTTCAGTTTCCTCTTAGTGTACATTGACATCGGCATTGTGATTGGTCTGATGATTCATTTTGTCATCTGTGGTGGTTGATTGTGCAGGAAGCGCTGAAAAGGTGTATTCTTGAACTGCTGACGAGCAAAGGCGGCAATCCGGAGCTGCAGCTCGGTTTCAGGTTCTGCTTTCTCCTGAATTCCTGCTCAGTGCCATTTGTTGCTTGCTGTTTGTAATTTGAGCAATGTTGTTCATCGTTATGGCAGAAAGCCGGCAGTTATCATGATTGTGGGAGTGAATGGAGGTGGAAAGACTACCTCATTAGGTACTCCTCTTGCATGCTTGGCTTTGTTAAGCTTAGATGTTTTTGTTCCATTCTGATAGATGGTCAATAAACGGTAACACACTCTCCTATGGTCCTACCCTAGTACCCTACTATATGGACAATTGACATTATGATGATGTTCTAAAGGCACAACACATGGTTATATAGGCACGCAAGTGCATTTGTGAAGGAAAAGATATTTGGTTATAAAAGCACAATACTGTAATTAGGCCATCACAAGATTATCTCTTATACACCAATGTACTAGTTACTCGAAGTGAATTTATCACGCCTATGTAAGGTATTTTCAGCTCAATGCAAAACTACTTGCATATTAAGCTTGGATTGTGGCATAGCATTGGATTAAGCTTCTGCAGGTTATCTTGTCGCTTTAAAGCTAATATGGTACCTAGATAGTAAGGAGCTCCTCAATATGCAGTTCTGGTTCGGGCATTTTCTACCATCTGCATCTGGCATCACTATTTAGTTTGGAACGTTTTATACAGCATGATGCTTTGAAGTGGAAGATTGATCTTACTCCTTTTTTATGTATTTGTAGGAAAACTTGCTTACAGATTCAAGAATGAAGGAGTGAAGGTGAGGCTATTTTCTAGACATACCCTGGTTTATAGGCTAGATGCATGGGAATTAAATTCAGCTATGTACATATTGCCTCACCACATTCTCTGAACATGTAATATTGTACAATAGATCAAAATAATGAGTTCATGTTCATGCTTTCAACAATAATATAGGTATTGATGGCAGCAGGTGATACCTTCAGAGCAGCAGCTCGTGACCAGCTAGAAGTTTGGGCAGAGAGAACAGGTTCAGAGATTGTTATCGATAATGATAAGAAAGCAAAACCTGCATCAGGTATGATTTTTTGATCTGCCAAGCATTGTGATCACACTCTGTTCTCATAAGGAGGTTAGCTTCTATGTTTCATCTAATTTGACTTGCTTGGTAGTTCTCTCGCAGGCAGTGAAGCGCGGGAAGCGTGAAGGATTTGATCTTGTTCTTTGCGACACGTCAGGACGTATGATTATTTTAGTGACTGAGAGCAGAATATGCATATGTTTGGTGATTTGCTGATTGGTTGAAATGACTTTGTTTCAGCACTTATTTTTCAGGACTTCATACAAATTATGGTCTGATGGAAGAATTGGTTTCCTGCAAGAAAGTCATAGCTAAAGCCCTTCCGGGTGCTCCTAATGTATGCTGTGTTTACATGCAAAGGACTTGATTTTGTGTTGATTGGATCATTTTGGCATGTGCAGTACTTTTGAGGGCAAGCTTAGAGAAGCACGGTTATGATTCTAATACTTCATAGCGCTCTCATTGTTATTAACTACTAGCATATATTCCTTGCTTAACAGGAGATCTTGCTGGTTCTGGATGGCACGACTGGCTTGAATATGCTACAACAAGCGAGGGAGTTCAATGATGTAATCACCATTTCCTGGTTATTTTGGTACTCCTGATTTTTCTTTTTTTTTTCATCAAGATATAACGAACTCTGTTGGCTTAATGCCAGGTTGTTGGAGTCACAGGATTCGTCCTAACAAAGCTTGATGGAACTGCTCGTGGTGGTTGTGTGGTATACACATATTCCTTGCCATATGCAGTTTATAAACAACAACATTTTAGTGGTTCACCTGAATTTTGTTGTTTGATCTATTGCAGGTTAGCGTTGTAGATGAACTTGGAATTCCAGTAAAGTTTATTGGTGTTGGTGAAGGGATGGAGGATCTTCAGCCTTTTGATGCTGAGGCATTTGTTGAAGCCATTTTTCCTTGA</dnaseqindica>|
 +
Link = [http://plants.ensembl.org/Oryza_indica/Gene/Summary?g=BGIOSGA000079 EnsemblPlants:BGIOSGA000079]|
 
}}
 
}}
 
[[Category:Genes]]
 
[[Category:Genes]]
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[[Category:Japonica mRNA]]
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[[Category:Indica mRNA]]
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[[Category:Oryza Sativa Japonica Group]]
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[[Category:Oryza Sativa Indica Group]]
−
[[Category:Japonica Genes]]
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[[Category:Indica Genes]]
−
[[Category:Japonica Mitochondrion]]
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[[Category:Indica Chromosome 1]]
−
[[Category:Mitochondrion]]
+
[[Category:Chromosome 1]]

Latest revision as of 03:10, 29 May 2014

Please input one-sentence summary here.

Annotated Information

Function

Chalk5 influences grain chalkiness, which also affects head rice yield and many other quality traits. Chalk5 encodes a vacuolar H+-translocating pyrophosphatase (V-PPase) with inorganic pyrophosphate (PPi) hydrolysis and H+-translocation activity.Elevated expression of Chalk5 increases the chalkiness of the endosperm, putatively by disturbing the pH homeostasis of the endomembrane trafficking system in developing seeds, which affects the biogenesis of protein bodies and is coupled with a great increase in small vesicle-like structures, thus forming air spaces among endosperm storage substances and resulting in chalky grain. The elevated activity of Chalk5 increases the proton concentration and promotes water loss, which could disturb pH homeostasis in the endomembrane trafficking system of developing endosperms, resulting in a great increase in small vesicle-like structures coupled with an abnormal decrease in protein body number and size, causing the formation of air spaces among starch granules and protein bodies and thus aberrant shape and spatial arrangements of these storage substances, leading to chalky grain.


  • Ng.2923-F2.jpg
  • Ng.2923-F4.jpg
  • 未标题-1.jpg

Expression

Two consensus nucleotide polymorphisms in the Chalk5 promoter in rice varieties might partly account for the differences in Chalk5 mRNA levels that contribute to natural variation in grain chalkiness.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Li Yibo,Fan Chuchuan,Xing Yongzhong etc.Chalk5 encodes a vacuolar H+-translocating pyrophosphatase influencing grain chalkiness in rice,Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2014/04/46(4):1061-4036

Structured Information

Gene Name

chalk5

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000079, complete gene.

LocusTag

chalk5

Ensembl Transcript ID

BGIOSGA000079-TA

Ensembl Protein ID

BGIOSGA000079-PA

Length

2622

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:46289509..46292130

Sequence Coding Region

46291834..46292130,46291618..46291722,46291453..46291526,46291309..46291367,46290712..46290749
,46290433..46290553,46290270..46290338,46290093..46290175,46289861..46289929
,46289709..46289771,46289509..46289622

Genome Context

</Ng.2923-F1.jpg> name=IndicaChromosome01:46289509..46292130 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46289509..46292130 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCACACTCCCACGTCATCCCCTTCCTCTCCCCGGCGGCGACGTCCGCGCGCTGCTCCCCCTACGGCCACCGCCGCCGCGGCCGCGCGGGGCTCCTGCGGTGCGCGGCGGCGGCGGGGCAGGCGGGGTTCTTCACCCGCCTGGGACGCCTCATCCAGGAGAAGGCCAAGAGCGACGTCGAGAAGCTCTTCTCCGGCTTCTCCAAGACCCGCGAGAGCCTCTCCGTCGTCGACGAGCTCCTCACCTACTGGAACCTCGCCGACACCGACCGCGTCCTCGACGAGCTCGAGGAGGCTCTGCTGGTGTCGGATTTTGGCCCCAAGATTTCGTTCCGGATCGTGGACACTCTACGCGAGGAAATCCGCGATGGCAAGCTCAAGTCTGGGGCTGAGATAAAGGAAGCGCTGAAAAGGTGTATTCTTGAACTGCTGACGAGCAAAGGCGGCAATCCGGAGCTGCAGCTCGGTTTCAGAAAGCCGGCAGTTATCATGATTGTGGGAGTGAATGGAGGTGGAAAGACTACCTCATTAGGAAAACTTGCTTACAGATTCAAGAATGAAGGAGTGAAGGTATTGATGGCAGCAGGTGATACCTTCAGAGCAGCAGCTCGTGACCAGCTAGAAGTTTGGGCAGAGAGAACAGGTTCAGAGATTGTTATCGATAATGATAAGAAAGCAAAACCTGCATCAGTTCTCTCGCAGGCAGTGAAGCGCGGGAAGCGTGAAGGATTTGATCTTGTTCTTTGCGACACGTCAGGACGACTTCATACAAATTATGGTCTGATGGAAGAATTGGTTTCCTGCAAGAAAGTCATAGCTAAAGCCCTTCCGGGTGCTCCTAATGAGATCTTGCTGGTTCTGGATGGCACGACTGGCTTGAATATGCTACAACAAGCGAGGGAGTTCAATGATGTTGTTGGAGTCACAGGATTCGTCCTAACAAAGCTTGATGGAACTGCTCGTGGTGGTTGTGTGGTTAGCGTTGTAGATGAACTTGGAATTCCAGTAAAGTTTATTGGTGTTGGTGAAGGGATGGAGGATCTTCAGCCTTTTGATGCTGAGGCATTTGTTGAAGCCATTTTTCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAHSHVIPFLSPAATSARCSPYGHRRRGRAGLLRCAAAAGQAGFFTRLGRLIQEKAKSDVEKLFSGFSKTRESLSVVDELLTYWNLADTDRVLDELEEALLVSDFGPKISFRIVDTLREEIRDGKLKSGAEIKEALKRCILELLTSKGGNPELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRFKNEGVKVLMAAGDTFRAAARDQLEVWAERTGSEIVIDNDKKAKPASVLSQAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPNEILLVLDGTTGLNMLQQAREFNDVVGVTGFVLTKLDGTARGGCVVSVVDELGIPVKFIGVGEGMEDLQPFDAEAFVEAIFP</aaseq>

Gene Sequence

<dnaseqindica>1..297#409..513#605..678#764..822#1382..1419#1578..1698#1793..1861#1956..2038#2202..2270#2360..2422#2509..2622#ATGGCGGCACACTCCCACGTCATCCCCTTCCTCTCCCCGGCGGCGACGTCCGCGCGCTGCTCCCCCTACGGCCACCGCCGCCGCGGCCGCGCGGGGCTCCTGCGGTGCGCGGCGGCGGCGGGGCAGGCGGGGTTCTTCACCCGCCTGGGACGCCTCATCCAGGAGAAGGCCAAGAGCGACGTCGAGAAGCTCTTCTCCGGCTTCTCCAAGACCCGCGAGAGCCTCTCCGTCGTCGACGAGCTCCTCACCTACTGGAACCTCGCCGACACCGACCGCGTCCTCGACGAGCTCGAGGAGGCGCGTCCCCTGCTCCACTGCTCTGCATGCTGTTCTCTCCTTCTTCACTGTTCGGCGCTGCTTCTGTCTTCGTTTTTTTTGAATGTTTCCTGCTTGGTCTCGTGCACGCAGGCTCTGCTGGTGTCGGATTTTGGCCCCAAGATTTCGTTCCGGATCGTGGACACTCTACGCGAGGAAATCCGCGATGGCAAGCTCAAGTCTGGGGCTGAGATAAAGGTCATTTCAGTTTCCTCTTAGTGTACATTGACATCGGCATTGTGATTGGTCTGATGATTCATTTTGTCATCTGTGGTGGTTGATTGTGCAGGAAGCGCTGAAAAGGTGTATTCTTGAACTGCTGACGAGCAAAGGCGGCAATCCGGAGCTGCAGCTCGGTTTCAGGTTCTGCTTTCTCCTGAATTCCTGCTCAGTGCCATTTGTTGCTTGCTGTTTGTAATTTGAGCAATGTTGTTCATCGTTATGGCAGAAAGCCGGCAGTTATCATGATTGTGGGAGTGAATGGAGGTGGAAAGACTACCTCATTAGGTACTCCTCTTGCATGCTTGGCTTTGTTAAGCTTAGATGTTTTTGTTCCATTCTGATAGATGGTCAATAAACGGTAACACACTCTCCTATGGTCCTACCCTAGTACCCTACTATATGGACAATTGACATTATGATGATGTTCTAAAGGCACAACACATGGTTATATAGGCACGCAAGTGCATTTGTGAAGGAAAAGATATTTGGTTATAAAAGCACAATACTGTAATTAGGCCATCACAAGATTATCTCTTATACACCAATGTACTAGTTACTCGAAGTGAATTTATCACGCCTATGTAAGGTATTTTCAGCTCAATGCAAAACTACTTGCATATTAAGCTTGGATTGTGGCATAGCATTGGATTAAGCTTCTGCAGGTTATCTTGTCGCTTTAAAGCTAATATGGTACCTAGATAGTAAGGAGCTCCTCAATATGCAGTTCTGGTTCGGGCATTTTCTACCATCTGCATCTGGCATCACTATTTAGTTTGGAACGTTTTATACAGCATGATGCTTTGAAGTGGAAGATTGATCTTACTCCTTTTTTATGTATTTGTAGGAAAACTTGCTTACAGATTCAAGAATGAAGGAGTGAAGGTGAGGCTATTTTCTAGACATACCCTGGTTTATAGGCTAGATGCATGGGAATTAAATTCAGCTATGTACATATTGCCTCACCACATTCTCTGAACATGTAATATTGTACAATAGATCAAAATAATGAGTTCATGTTCATGCTTTCAACAATAATATAGGTATTGATGGCAGCAGGTGATACCTTCAGAGCAGCAGCTCGTGACCAGCTAGAAGTTTGGGCAGAGAGAACAGGTTCAGAGATTGTTATCGATAATGATAAGAAAGCAAAACCTGCATCAGGTATGATTTTTTGATCTGCCAAGCATTGTGATCACACTCTGTTCTCATAAGGAGGTTAGCTTCTATGTTTCATCTAATTTGACTTGCTTGGTAGTTCTCTCGCAGGCAGTGAAGCGCGGGAAGCGTGAAGGATTTGATCTTGTTCTTTGCGACACGTCAGGACGTATGATTATTTTAGTGACTGAGAGCAGAATATGCATATGTTTGGTGATTTGCTGATTGGTTGAAATGACTTTGTTTCAGCACTTATTTTTCAGGACTTCATACAAATTATGGTCTGATGGAAGAATTGGTTTCCTGCAAGAAAGTCATAGCTAAAGCCCTTCCGGGTGCTCCTAATGTATGCTGTGTTTACATGCAAAGGACTTGATTTTGTGTTGATTGGATCATTTTGGCATGTGCAGTACTTTTGAGGGCAAGCTTAGAGAAGCACGGTTATGATTCTAATACTTCATAGCGCTCTCATTGTTATTAACTACTAGCATATATTCCTTGCTTAACAGGAGATCTTGCTGGTTCTGGATGGCACGACTGGCTTGAATATGCTACAACAAGCGAGGGAGTTCAATGATGTAATCACCATTTCCTGGTTATTTTGGTACTCCTGATTTTTCTTTTTTTTTTCATCAAGATATAACGAACTCTGTTGGCTTAATGCCAGGTTGTTGGAGTCACAGGATTCGTCCTAACAAAGCTTGATGGAACTGCTCGTGGTGGTTGTGTGGTATACACATATTCCTTGCCATATGCAGTTTATAAACAACAACATTTTAGTGGTTCACCTGAATTTTGTTGTTTGATCTATTGCAGGTTAGCGTTGTAGATGAACTTGGAATTCCAGTAAAGTTTATTGGTGTTGGTGAAGGGATGGAGGATCTTCAGCCTTTTGATGCTGAGGCATTTGTTGAAGCCATTTTTCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000079

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