Difference between revisions of "Os04g0682900"

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(Created page with "{{JaponicaGene| GeneName = Os04g0682900| Description = Similar to DNA mismatch repair protein MSH3 (AtMsh3)| Version = NM_001060835.1 GI:115461399 GeneID:4337442| Length =...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os04g0682900|
 
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Description = Similar to DNA mismatch repair protein MSH3 (AtMsh3)|
 
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Version = NM_001060835.1 GI:115461399 GeneID:4337442|
 
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Length = 7109 bp|
 
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Definition = Oryza sativa Japonica Group Os04g0682900, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
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Please input expression information here.
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AP = Chromosome 4:35269930..35277038|
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CDS = 35271908..35272018,35272569..35272640,35272735..35272995,35273156..35273287,35273474..35273725<br>,35274331..35274582,35274719..35274817,35275114..35275278,35275384..35275578<br>,35275996..35276898|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008397:35269930..35277038
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source=RiceChromosome04
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008397:35269930..35277038
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source=RiceChromosome04
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgggcaagccgaagcagcaagtgctctcccgcttcttctcccccaagccgcggccctccgcccccgccaccgccgacgatccgccgcctccgcctagacctcccgccgagccgcccgtcgccgccgtcgtctccttctcgcccgccaagcgcgcgcgcgccctctccgtctcccccaaaaccaccgccaaaagggccaagccctcccctcccccttccgactacgttcgccgcaggctgctcgaaccgccccggccgcccccgcccgccgctgtgaaccctagcggcaaagcttacaccccgctggagcagcaggtggtcgacctcaaggcgcgccaccccgacgtcctcctcatggtcgaggtcggttaccgcttccgcttcttcggcgaggacgccgccgtcgccgcctccgtgctcggcatcatcgcccaccccgaccacagcttcctcaccgccagcatccctaccttccgcttgggcttccacgtccgccgcctcgtcgccgcggggcacaaggttggcgtcgtccgccagaccgagacggcggcgatcaaggcggcgcacggcgggggcgcggccggcacgcccttcgcgcgcgggctctcggcggtgtacacgcgcgccactatcgaggccgcggccggggagctggagggcggcggcgcgcccgacgaggggagcaggtacctcgtgtgcgtggtggacaaggaggtggacgccatggggacggaggggttcgaggtgaagatcggggtggtggccatcgaggtttcgaccggtgaggttgtgcacggcgagttcatggacggagtctcgaggaatggccttgaggccgtgctgcttggcttggcgcccgttgaggtcatcctcgggactccaatatcctctgccacggaaaagctgatggtggcatatgccgggcctacctctaatgtccgggttgagcgcacctcgcgtctttgttttagtgagggtggtgctttagctgaactgctctctttgtttgagaagtctggggttgatgctccaactgttgagaatggcagacatttgatggagatgaacgaggagaacaataatcctcgtgggattgagggtatcatggctatgccagaactagttatccatgcactggccttgagtgttcgctatctcaagggttttggtatggacaggataatctgctttggttcttcatttcagccatttacagctaacactgaaatgtctctgtcagcaaatactcttcaacaacttgaggtattgaagaaccactcagatggttcattggatggatcattgttccaaactatgaacaacacatgtacagcttttggatccagattgtttagacactggctgactcaccctttatgtgatagaaatcaaatatgtactcgtcatgacgcggtctctgagatctctgaatcaattggatcacaacaatattcaactaacaatctccaggatgaagtggacatgtcttgctcatcttctgtgagaagtgatctgagcaccattctttcatccgttttgagaatgctggcaggaactcttgatatacaaagaggaataacaaggattttccactgcaaagccacagcgaaagagtttgttggggtcgtccaagctatcctgacggctggaaagcaactgcagaagcttgttcttgaggatacagacaccatgtcttctcagcatagaactgtgcactctcctttgttgagaaggctaataaatacggcttcatcatgtactgtcctggctaatgctgcgacacttgtgtcttgtcttaacaaagatgctgctgatcaaggagatatgctaaacttattcattgcatctgttgatcagttcccagaggttgcagagggtcatgcaactgttgaaatggccaagcagaaattggagctgttaattactgagtatcgaaagcagcttggtgtgcgcaacttggagtttaaaacagtagctgggacaactcatttgattgaactaccggtggatagaaaggtaccttcaagttggatgaaagtaaacagcaccaagaaaacaattagataccacactccggaagtctcgaaaaacttggagaatttattgctggctaaggaaaagctagcagttatctgcaggacaacatggaataacttcctcatggatttcggcagatactatgcgcagtttcaagcaactgttaaatctcttgccactctggactgcttatactcgcttgccactctcgcaaaacaaaataaatatgtacgaccaaattttgttcgtgagaatgaagcaagtcagattcacataaaagatggccgccatccggtggtcaatatgaaaataatattctactgtgccacggacactatttccaatactactggcagatcacacacggtcatgcatacttcatgtgaagcatttagtttatgttga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MGKPKQQVLSRFFSPKPRPSAPATADDPPPPPRPPAEPPVAAVV                    SFSPAKRARALSVSPKTTAKRAKPSPPPSDYVRRRLLEPPRPPPPAAVNPSGKAYTPL                    EQQVVDLKARHPDVLLMVEVGYRFRFFGEDAAVAASVLGIIAHPDHSFLTASIPTFRL                    GFHVRRLVAAGHKVGVVRQTETAAIKAAHGGGAAGTPFARGLSAVYTRATIEAAAGEL                    EGGGAPDEGSRYLVCVVDKEVDAMGTEGFEVKIGVVAIEVSTGEVVHGEFMDGVSRNG                    LEAVLLGLAPVEVILGTPISSATEKLMVAYAGPTSNVRVERTSRLCFSEGGALAELLS                    LFEKSGVDAPTVENGRHLMEMNEENNNPRGIEGIMAMPELVIHALALSVRYLKGFGMD                    RIICFGSSFQPFTANTEMSLSANTLQQLEVLKNHSDGSLDGSLFQTMNNTCTAFGSRL                    FRHWLTHPLCDRNQICTRHDAVSEISESIGSQQYSTNNLQDEVDMSCSSSVRSDLSTI                    LSSVLRMLAGTLDIQRGITRIFHCKATAKEFVGVVQAILTAGKQLQKLVLEDTDTMSS                    QHRTVHSPLLRRLINTASSCTVLANAATLVSCLNKDAADQGDMLNLFIASVDQFPEVA                    EGHATVEMAKQKLELLITEYRKQLGVRNLEFKTVAGTTHLIELPVDRKVPSSWMKVNS                    TKKTIRYHTPEVSKNLENLLLAKEKLAVICRTTWNNFLMDFGRYYAQFQATVKSLATL                    DCLYSLATLAKQNKYVRPNFVRENEASQIHIKDGRHPVVNMKIIFYCATDTISNTTGR                    SHTVMHTSCEAFSLC</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]]
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DNA = <dnaseqindica>5021..5131#4399..4470#4044..4304#3752..3883#3314..3565#2457..2708#2222..2320#1761..1925#1461..1655#141..1043#agtgggccagtggctcaccgcccacttcaccggtttccggcgtccggcgcggcgcctgcagaagagcccctcgaaaacccctaccccccatagctgcccacgtccccccgtttcccgcgcccacctccaccgccatcgccatgggcaagccgaagcagcaagtgctctcccgcttcttctcccccaagccgcggccctccgcccccgccaccgccgacgatccgccgcctccgcctagacctcccgccgagccgcccgtcgccgccgtcgtctccttctcgcccgccaagcgcgcgcgcgccctctccgtctcccccaaaaccaccgccaaaagggccaagccctcccctcccccttccgactacgttcgccgcaggctgctcgaaccgccccggccgcccccgcccgccgctgtgaaccctagcggcaaagcttacaccccgctggagcagcaggtggtcgacctcaaggcgcgccaccccgacgtcctcctcatggtcgaggtcggttaccgcttccgcttcttcggcgaggacgccgccgtcgccgcctccgtgctcggcatcatcgcccaccccgaccacagcttcctcaccgccagcatccctaccttccgcttgggcttccacgtccgccgcctcgtcgccgcggggcacaaggttggcgtcgtccgccagaccgagacggcggcgatcaaggcggcgcacggcgggggcgcggccggcacgcccttcgcgcgcgggctctcggcggtgtacacgcgcgccactatcgaggccgcggccggggagctggagggcggcggcgcgcccgacgaggggagcaggtacctcgtgtgcgtggtggacaaggaggtggacgccatggggacggaggggttcgaggtgaagatcggggtggtggccatcgaggtttcgaccggtgaggttgtgcacggcgagttcatggacggagtctcgaggaatggccttgaggccgtgctgcttggcttggcgcccgttgaggtcatcctcgggactccaatatcctctgccacggaaaaggtatacctgtgcggtttgtgatgtgcgaattgtaggctacctgatttgttataatctgcaagtaattccaggttgtaacttacctggtctgttttctcagctattgtagttgttctaaatggaaacttatttaggattgttggtggaaagactcacagtcatctgggtagtttggcagcaatagttcggcattttaaaatttctcagcaaaaaaagaatgattgcttgttgactctgccaaattaagttctagcaaattattcctatagtgaactttggaagggttatttgccttacagtttaatgagttccccccagaattgtttaaagttcttacaatctgtgtgaaagttccttcctgttttgatgtgcttgagacccctctgtttgatttgttctgttctacatgttgtccagctgatggtggcatatgccgggcctacctctaatgtccgggttgagcgcacctcgcgtctttgttttagtgagggtggtgctttagctgaactgctctctttgtttgagaagtctggggttgatgctccaactgttgagaatggcagacatttgatggagatgaacgaggagaacaataatcctcgtgggattgaggtaccgttaagttcttctgaactcactgtcatcgcaccttatgattgggtctccatatgtagtttagtaagttccaatttctttttttctttttggttcaagcagggtatcatggctatgccagaactagttatccatgcactggccttgagtgttcgctatctcaagggttttggtatggacaggataatctgctttggttcttcatttcagccatttacagctaacactgaaatgtctctgtcagcaaatactcttcaacaacttgaggtagacttttatacaacaccgccaaagtaaattttttgtttgcatatatatgaccttctgtttatttactctgcactgtctgtaagtctcatcttgaatcctaactatatggaagaaagtgcatcctatcattaaataatatatatatatatatattatttaatatgagacttacagttggcttttcttagaaacacatggatcacgtcaactttttgtttttatgacctatgttcttaatacacttttccactccattcttccatatatgaaagtaacacctggagtgctttcaggtattgaagaaccactcagatggttcattggatggatcattgttccaaactatgaacaacacatgtacagcttttggatccagattgtttagacactgggtaagactctgtaacctggtcatggaatgaatattaatccatgatgcatcatatcactatgaaaagtgataactagacagctattgtttatcttgactattgtcttaaaggtctttggttgtgacatttcttgcagctgactcaccctttatgtgatagaaatcaaatatgtactcgtcatgacgcggtctctgagatctctgaatcaattggatcacaacaatattcaactaacaatctccaggatgaagtggacatgtcttgctcatcttctgtgagaagtgatctgagcaccattctttcatccgttttgagaatgctggcaggaactcttgatatacaaagaggaataacaaggattttccactgcaaagccacagcgaaagaggtcaaatatttattattccttttcggttctagacttctagttaatttgataatgacacctaattatgctagtttatttcattaaactgacattatacagcatgaatatcctgcttagactaatcccttttttttattatactctctgttcagactgtacatttttattatttactgtccaaatattcccatgatttcaattcaatattcatgtaatcagggtacttcaaatgatactcccttcgggctgataatacttgtcgttttagacaaggatgaggtcaaattttagaatctttgattatgaatcatttttaaaatatttgtctttcaaatatggtgactacatgtatagattagtcttaaaaagtactttaataaaatcatatatttgttaacatttttatacatattataatggaaaataatggtcaaagttgttttttggagaccgtgcccttgtccaaaagaccaaaacaacaagtattatcaacccggagggagtaaatgttatgctgctgaaaaattatggcttggttcttatgccaatagttgactggtgcattctgttcttgacgcctgattgcctatagttttgtattgtagtttgttggggtcgtccaagctatcctgacggctggaaagcaactgcagaagcttgttcttgaggatacagacaccatgtcttctcagcatagaactgtgcactctcctttgttgagaaggctaataaatacggcttcatcatgtactgtcctggctaatgctgcgacacttgtgtcttgtcttaacaaagatgctgctgatcaaggagatatgctaaacttattcattgcatctgttgatcagttcccagaggtataaccttctcttttagggcttgtttggttaatccccatgagggagggaattggaggggattaattccacaccccttcaattcccttgtgggagggattaactgaacaaagccttaatggaatgatcttgttattccctagtttttatgatgcatcgtcttcatatttgaaaaaaaaattataggttgcagagggtcatgcaactgttgaaatggccaagcagaaattggagctgttaattactgagtatcgaaagcagcttggtgtgcgcaacttggagtttaaaacagtagctgggacaactcatttgattgaagttaagtcgcttaattgaattcagttaacttctaactattgttaattgcagttccaagtagcaaatgatgtccatgagaaaagtagcacagagcaaaatattttacagttttgttatacgattaatattaccatcatcatgtcatatcttgtgcctgcagctaccggtggatagaaaggtaccttcaagttggatgaaagtaaacagcaccaagaaaacaattagataccacactccggaagtctcgaaaaacttggagaatttattgctggctaaggaaaagctagcagttatctgcaggacaacatggaataacttcctcatggatttcggcagatactatgcgcagtttcaagcaactgttaaatctcttgccactctggactgcttatactcgcttgccactctcgcaaaacaaaatgtaatagactgttcttaacccttttgtgctcatctttttacattcactttgttccaacagtacattgctaaacaaccaatattccatctgccagaaatatgtacgaccaaattttgttcgtgagaatgaagcaagtcagattcacataaaagatggccgccatccggttagttttggatcacttcccactccattcctaatatgaatgcaacttcagtttttaacaggcaaatcacaaacagtatcattgcattccttttattagttgtaatacagtactgcctcacaagttttgcatccctaagaaaacaaatagaagaacctgaaaatttgagatactcatactgcagttgaggggattagttctattggtcaattttaattactccttccttttggctgtacatctaccgtgctttgggcattttggtcttttcaaatatttaggtacctaggttttgtaagggaagtcgtgtgtacagatttgtcacgaaaagtactttcgtaatatttcaatttgatcgggtttttggccactggtggtcaaagttgtttttccaaggccataccattgttcaacacgttattatatctggcctgagtagagtagttgcatgaaattgcatgcatgtttcaactttaagagctataaagaatagtgtcatgataactgcatgctttcttgaaagcttagattttacctacaattatttcaggtggtcaatatgaaaataatattctactgtgccacggacactatttccaatactactggcagatcacacacggtcatgcatacttcatgtgaagcatttagtttatgttgacaatgtttgtatttctatgctgttggtttttaggttctggagtccctacttggagtcaattttgttccaaatgataccgagcttcatgcaaatagtgagtactgccagattgttacaggaccaaacatgggaggaaagagttgctatattcgtcaagttgctctaattacattgatggcccaggtataaatattgtctcacacttgtagttcactcatgttaacatgttctggatgtataacatagttactgcaaacttagttgttgggcttaggacctgaggaagtaagggtttactttgttgttatcttaccctgactctgagattatcctaacacttggtacactgatttccttaggttggttccttcgtaccagcttcatcagcaacattgcatgctgttgatggaatttatactcgaatgggcgcgtccgatagtattcagcatggaacaagtaccttttatgaggagttgagtgaagcttccaacatattgcataactgctcatctcggtcactagttatcatcgatgagcttggtcgtggtacaagcacacatgatggtgttgctatagcttatgctacattacactatcttctgaaagagaagaaatgcatggtaatttttgtcactcattatccaaagattcttaatattctgagagaatttgaaggttctgtcggtgcataccatgtctcatatctagcaacacggaaactgttggaagtagctgatagacagatggtgattaacaacacagagacaaaggatcttggtgaaatcactttcttatataaacttgttgctggagcttcagacagaagcttcggtcttaatgttgcgctgcttgcacaggttagttttaagttgtcatgtctttttgtttctatatttctagtttggtccaaatttgattagttattaagacatgtgcttaataccatgacttgcaagtgaccacctttcttcccttgtactctagactgattgtagaataacgacatacattcttcagtttgcttgttgctgtctatatagggaataggttctagttttgggttcattgttttagtacaggaaataagtcctctgttttcttcaatgacgatgcatgttgtggttaatttttgaagtacccttcctcctttgcaagctgagttacagtttgaagtgaaacagtgcttatgatctccttgtttttgttacttgtttgctgatatgtgttcctatttgcagcttccatctagctgtattgagcgcgcttcagtcatggcagccaaacttcaacaggagttaagtgagcgtgagaaaaataagttttgtaggctaatggacgttccacgggaaagctctccgaaagagctttgtgcacagccttatcaagggctggctgaagcatgccacaggatactatttaacgttacatctgctcaaagtaatgacgagttaacggatacactatcttctttaagggaagccagggaaattgccttgaaggcaataaaaggctggtgatcatgttcttcgaagcagtggatacttcaccactggtttccttttgtttttttgaagggatcaggtattgatgctgttccattctgttcaggtattgcttcgttctagctactagtttctaatgtagtgccttgactgatctttgcatgaaggtggcatcttctgataatctactaaaaatttatcgaagatgattttgggactaatgttatttatcgaagacgattttgggactaatgttagccattgtgctaatggcagcagtgtagactgtaaaatatagtggatctggaaggtggaggaccttgaagttaaagccaactctatggaagagcaagtaacttattgtaaatctgtagttacagcatcagttgatgtatccagacttgtccaaaccatattaaagctttgcctccattttgaagtgtagatgcagaaatgagatgcatctcttatatcct</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060835.1 RefSeq:Os04g0682900]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 4]]
 
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[[Category:Chromosome 4]]
 

Latest revision as of 08:10, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information