Difference between revisions of "Os03g0417900"

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(Created page with "{{JaponicaGene| GeneName = Os03g0417900| Description = Similar to ARE1-like protein| Version = NM_001056907.1 GI:115453542 GeneID:4333120| Length = 10350 bp| Definition =...")
 
 
(One intermediate revision by one other user not shown)
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os03g0417900|
 
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Description = Similar to ARE1-like protein|
 
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Version = NM_001056907.1 GI:115453542 GeneID:4333120|
 
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Length = 10350 bp|
 
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Definition = Oryza sativa Japonica Group Os03g0417900, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
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Please input expression information here.
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AP = Chromosome 3:18012450..18022799|
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CDS = 18012804..18013105,18013186..18013243,18013706..18013780,18013872..18014006,18014128..18014307<br>,18014457..18014507,18014679..18014779,18015704..18015762,18015843..18015958<br>,18016810..18016995,18017582..18017663,18018363..18018454,18019295..18019438<br>,18020198..18020278,18020957..18021040,18021607..18021708,18022064..18022159<br>,18022381..18022441,18022560..18022663|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008396:18012450..18022799
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source=RiceChromosome03
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008396:18012450..18022799
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source=RiceChromosome03
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atggacgctgcccccgccgccgccgaggcgcacgacgggcagagggagcggttcgacctcggggtgttggtcggcgacctcgccctcgacgaggatgtcgccagtgatgaggacgagtcgctggaggggttgaggcaggagctcgacgactgcaaggacgacgaggaagtggcaaatatcctggctaacggcatcaaactgcgtgattacacaaaaggcgtcgagaacaacattcgccaaattgagctggattctatacaggattacattggagaaagtgaaaacttggtatcgctgcatgatcagattcgtgactgtgataacattttgtcacaaatggaaactgttctgactggattccagacagaaattggttctataagttcggagataaaggtccttcaggagaaatctatggacatgggattaaagttgaaaaatcgtaaggctgcagagtctaaattgtcaaaatttgttgaggatataatagtgcctccaagaatgattgacataattgtcgatggagaggttaatgacgaatacatgaaaacacttgagactctaagcagaaaaatcaagttcattgaagttgatgcaatggttaaatcgtccaaggctctaaaggatgttcaacctgaggttgagagacttaggcagaaagcagtctcaaagatttttgaatttgtcatccaaaagttctatgccttgagaaaaccgaaaacaaatattcagattctacagcagagtgttcttcttaaatacaagtacacgatagtttttcttaaggaacatgctaaggagatatatgcggaagttcgtgcagcttatattgataccatgaacaaggtgctgagtgcacatttccgtgcgtatattcaagcattagagaaactacaactggacatagcaacctctaccgacttacttggagttgaaactagaagtacaggattccttttctccatgggaaaagaatctctgaagacccgttcttctgtctttgctttgggtgaaaggataaacatattaaaggaaattgatcagcctgccttgatacctcacatagctgaagccaagtctcaaaaatatccatatgaagttcttttcagaagcttgcaaaaacttttgattgatacagctacttcagagtaccttttctctgatgatttctttggtgaagaatcactgtttaatgacatatttgcaggacctatccaagttgttgatgaacatttcaatgctgtgctcctgaactgttatgacgcaatcggcataatgcttatgatccgaataattcatcagcatcagctaatcatgtttaagcggcgaatcccatgtttggactcttacttagacaaggttaacttatcactctggcctcgcttcaagatggtgtttgatttgcatttgaacagcttacgaaatgcaaatgttaagactctttgggaggatgatgttcatcctcactatgtcatgaggagatatgctgaatttacagcatccctcgtgcatctcaatgttgaatatggagatggtcagcttgatcttaatctcgagcggttgcggatggctgttgaggaattgcttgttaagttggctaagatgttccctaaacaaaagttgcaaactgttttcctgataaacaactatgatttaacgatttccatactgaaggaagctggcactgagggtggaaaagcacaagttcactttgaggaggttcttaagagcaatatttcagtatatgtggaggaacttctactggagcatttcagtgatttgatcaaatttgtgaaatctcgcccgtctgaagacacagcatcaagctcggacaaggccagtgttagtgatgtcgagccattagtcaaggattttgccggtcggtggaaagctgcaattgagcttatgcacaaggatgtcattacatcttttagcaacttcctctgcggaatggagatcctgaaagcggcactcacgcagctgctgctgtactatacaaggatcaccgagtgtgtcaagaagatcaatggtggctctgctctcaacaaggacctggtttccatatcctctatcttatatgagatcaagaaatactccaggaccttttag</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MDAAPAAAEAHDGQRERFDLGVLVGDLALDEDVASDEDESLEGL                    RQELDDCKDDEEVANILANGIKLRDYTKGVENNIRQIELDSIQDYIGESENLVSLHDQ                    IRDCDNILSQMETVLTGFQTEIGSISSEIKVLQEKSMDMGLKLKNRKAAESKLSKFVE                    DIIVPPRMIDIIVDGEVNDEYMKTLETLSRKIKFIEVDAMVKSSKALKDVQPEVERLR                    QKAVSKIFEFVIQKFYALRKPKTNIQILQQSVLLKYKYTIVFLKEHAKEIYAEVRAAY                    IDTMNKVLSAHFRAYIQALEKLQLDIATSTDLLGVETRSTGFLFSMGKESLKTRSSVF                    ALGERINILKEIDQPALIPHIAEAKSQKYPYEVLFRSLQKLLIDTATSEYLFSDDFFG                    EESLFNDIFAGPIQVVDEHFNAVLLNCYDAIGIMLMIRIIHQHQLIMFKRRIPCLDSY                    LDKVNLSLWPRFKMVFDLHLNSLRNANVKTLWEDDVHPHYVMRRYAEFTASLVHLNVE                    YGDGQLDLNLERLRMAVEELLVKLAKMFPKQKLQTVFLINNYDLTISILKEAGTEGGK                    AQVHFEEVLKSNISVYVEELLLEHFSDLIKFVKSRPSEDTASSSDKASVSDVEPLVKD                    FAGRWKAAIELMHKDVITSFSNFLCGMEILKAALTQLLLYYTRITECVKKINGGSALN                    KDLVSISSILYEIKKYSRTF</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]]
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DNA = <dnaseqindica>9695..9996#9557..9614#9020..9094#8794..8928#8493..8672#8293..8343#8021..8121#7038..7096#6842..6957#5805..5990#5137..5218#4346..4437#3362..3505#2522..2602#1760..1843#1092..1193#641..736#359..419#137..240#ccgtcctccgatccgatccgatcccgacaccaccgcctccggtggtagatctggatcggagccaccccgccgccggcgatccccggcatcctcgccacccatcggtagcccctccgccgccgcagccgacgacgacatggacgctgcccccgccgccgccgaggcgcacgacgggcagagggagcggttcgacctcggggtgttggtcggcgacctcgccctcgacgaggatgtcgccaggtacggacggtgacgggatgccgcgccgcccgatctcgtcccgtggataacgtccgagaacgtgagcctttgcgcgctgttttgaataacatttggtttggtttttttttttcgacagtgatgaggacgagtcgctggaggggttgaggcaggagctcgacgactgcaaggacgacgaggtgctgcctgttgatccgatgcttatttatttttgttacttgtagactagtaacgagcttggcgattgagctctctttgggctacgtgcttctcaggtccctgggtgctgcattgttgtctttccgagctcacttatcaattacgagcaagaaacagtgtagccgtctgtttttctttcttgtgtgtggatcgctgattttacttttctgtgtggatgtaggaagtggcaaatatcctggctaacggcatcaaactgcgtgattacacaaaaggcgtcgagaacaacattcgccaaattgagctggattctatacaggtatttatatatgatatggtcattcacgtcaatcatccaagttaatatgcttgatctagagctgctctttttatatacatatgaatatgaactgcagtttgaatttgacgttgagtaggaatacagttacagcatggttttattttattttgaaataagattatttagcttattttgccagatggctataagactacgaatccatccaatgacttgcctattcttaccagagaaagtttacgttgatcaaataattgcacaaatgttgtggaaaaaaaaacttatgatcttcagcttctgatgcttcataaatagaaattggcagtggataaaatgtagtgttccctctttgtaggattacattggagaaagtgaaaacttggtatcgctgcatgatcagattcgtgactgtgataacattttgtcacaaatggaaactgttctgactggattccaggtaaaagcatattctcatatgttctgacaaaactatctgtggcattctcttgtgtgctggctagctgaatgagtagttatactgaacatattatcatcatgtttggaatgtgcaaactttagtattactttgtatcaattagcaattcacgtggtttctgaacttcttctcaaagaggagtctgcctactgtgagctacctgaaaattcaccaggatcatgtctctgcatttttaagctgtccttttgtcaactaaataacatgaaggcaacctccttggaagaactttctttacctgtatcacaattctatgctcaatgtttctagtttttactatgtgatccatgcgagaagttcattgacataattgaatcaaaacatttttagcttattatttactctttcttatcatttaattggatgaccaatgttccctctcaaaccaaaaaagtctttatactttttttttcctgttttctctacctaatctttcacctatagacaaaagtaactcactcttttacgatcactaagtcattctgcaattcttttgacttctgtggtagacagaaattggttctataagttcggagataaaggtccttcaggagaaatctatggacatgggattaaagttgaaaaatcgtaaggtttggttcacttcatactgtacattttatccgcatatatccaattattcctccatttcaatcttttctgatctgagtgcatactaggtccttgatttgaaatatctaggggattggtggtttagcatatattggttgcatcttggatattttatgactgttaaaatttgtaccttccaatatctcaagagtagatgccagagcatacatagtttctgtgttactacaatagttctttacatatcgacacatgaatgatcaccccattgcttgatataatgtttcagaaaatattgcatatgcgattaaggttctatcttacacttctgacaaataatcatgcatcataaattgttaccgaaggaacagccatgtgttgtatcttttttaaggaaatgtgttataactaattggacaaaccgatttgttatttagatttttgtttatcaaataatgagacaagactcaagtacaagacatggcatagaaattataaaatgagccctttttgcaacattataagggcagtcactgtcatctgaatcatcaaaagtagcttatcttggaattgtttcacagtttttatagctttttgcatgttatatatttctttcgttccatgcttaattatctttgatgatcctaatgttggttctcactcatttggaaatactgcaggctgcagagtctaaattgtcaaaatttgttgaggatataatagtgcctccaagaatgattgacataattgtcgatggagaggtgatcactatattcctttcatgttcgtttgcagctaaccttgcaactttctgatatggtaccaataccatgtgtagttatgcagcgcatgtttggttctcttgcccacccttgcgtagccttgcttctacctgatagtgaggatgcctcattttttcttgcataacattgtatttactagtaattgtggacgaggagatccttgtcaatgaaagatagccaattctgactagtcaaggtgtaataccctggccttaagtggtggcccaaatatagtcatttggtggaattaatcctacatgcggcaaagaagagagtgttagagggtgctatggataagtgggtctgctcccttcccccgacacacacataatcacagaggcacacacacaaagctagtgaaaaggggattttagacgctatggtattactattacagagtccttggcaagagatccaaacatgccattatgccaatggtttcttctcttctggctcagccgtgagaatgttcagtttaactgctttatatcctttcgtaggtgatttgtcctttttttaattattttttggtgcagctgttttttttctttgtctttgattgatatatttttttccaacagaagatttcaattgttagtttgatgtgtcatccgtcccaaggatctactttgttatcctagtcaacttgcttcttttgcagttaattctgattaatttgtttgagaactgaaaatgacctatgcatcaacactgcaggttaatgacgaatacatgaaaacacttgagactctaagcagaaaaatcaagttcattgaagttgatgcaatggttaaatcgtccaaggctctaaaggatgttcaacctgaggttgagagacttaggcagaaagcagtctcaaaggtttgaagaacaatcactagtttattacttctagtttcttatgagtgtgagcaggtctaggatttatatcatgctgaaggtgtatgtgcgtttcatctttcgtacatgcttatttttgtcaaaataattataggaaacaatctatggctttcagcatctgttttatgtgggttgaggggattatgtgtcatgcctttgtgctttctgagtttgcaaggttggttagttcatacatgctatgtcatctcagttcaatagagataattggctcagtaatatcatagaaatgagtcaattgaaagtgcctggtatgtccaccattaactagaatgatatgctaataatttatctggtacatttgatggcaaccagtttggtgttactaagaaagatgcagctatgttggctaataatttatctggtacatttgatggcaaccagtgtgtcactttaccatcaaatgtactagccataatggttcatttaaaattaggagttgccctaatttctgctacctctgtttattgctcagttcatacttgatagcgtactccagagcaaatacaagccattgtagatttggtcatttgaagtaagaagtcacatcaatgtccctctggatttctctgaaactttatcaggctttagatatgtttgggaaggcaagattggaaaaaaaatgtctcgtttattcatgagtatgaacttgaactttaataaaatgtccctggattcatggcatcttgctgattgaatttttatatctagccaatccaattgcagaaagctactaaagagttttatggctgatgactgatgcgttcataattgttcttgcagatttttgaatttgtcatccaaaagttctatgccttgagaaaaccgaaaacaaatattcagattctacagcagagtgttcttcttaaatacaagtatgcaaaatggtcttctctgatcctgttttatccacatttagttcttgcatgagcaatgttctatggatagtcattgggatcatgggtcaatgccattttccatgctctcagattcagtctgaagtcaaagacaaacttgtgggtcatgaatctaaagggagaccgagagggatgagatggggttagcaggattcttttttatgttcttgttgtaggtgcctcatgtttctgacactcgtataatttttgtaccttgcactaaatgtgatttgtggaccaagtgcatcaaatgcaccttgtgcctacaagtctccgtatggcattgcagcggattgttatccttttatttggtgcaactgctttaggcattttggtgtctggcaaattgctttccatttaatatataataatattatgtttcaaacaacggtattattgtgttctaaaaatatggaacaacttggagagacgtgatagttggataatatattttgtctaaccttagtttgattataaaacaagtatacttgattttaatttttcgtttgatagctttacaatatgcataacgcagcacaatgcagaactgcaatctgagcctaagttcctctacatggccatgcgattaaatcttctctctctctccctctctctggtgtgcaatttcttgattttcgtttgtgctccccattgcaggtacacgatagtttttcttaaggaacatgctaaggagatatatgcggaagttcgtgcagcttatattgataccatgaacaaggtgaatgttataataaatctcatagctatggtgtgaataggtattagattatcaatgtatgacctggatcctggtccagctttgtgtcccaatcattgccagggtaaggtttactactgcactgctgtacaaagtgtagagtagtagcaggcatgcttgagggtccaaatttagcaactatgtgttaatcctaggcaaagagttcaaaggcccaagctagctgtttcacgcttgtgctgcttccccaaggtggggtttggtcattggtgacttttgggcgatggattgttacagttgcatccctgtccgtttttcttcattctgttctttttgcaattctctgtatgtactgctgtgcttgttgtggtatcaaccttactcataaaaaaataattccatatgtacatacttttgaaactttctgcataggttagggaacactactagtctgtgtgcgatgacttttgacttgtgcaatgcagtgtactagtcgataacaataacaagagcacttgcattgtgtgtcttcttagatattttggagcaaatgctttcttgacatttttaccatattaccaatttgcaggtgctgagtgcacatttccgtgcgtatattcaagcattagagaaactacaactggacatagcaacctctaccgacttacttggagttgaaactagaagtacaggattccttttctccatgggaaaagaatctctgaagacccgttcttctgtctttgctttgggtgaaaggataaacatattaaaggtatttttattcctgacactccaactgacatttagatttttttttttttgataatgtagtttgtcaagtaattcactgttagctgtaatcagtcgatcctatacttatggttgtcttcaactgcattctacttgttaagcatgacacggaggctgggagctaaactgggtcatgtgatgctataaggttccaacaagaactaatggactaacataacaagctatttagttagcggtcaaacatgccacgagacacctatcattgtaaatcatcttatagtgcataattggcacatgaccataaatataatcctagagtaaatgtggctagttgccagacacttagtcctgtcttgttcacattttgagttgtctctaacattgtaacaagacatatggacttgcccacaccatttatggtgattatacaagttcagtaacatgattgtgccatgcaacccccaagtttagggacacaaatgacatgccaacacaaatttaaggattgaggatccagttagcaccataatcaaatttgtggatacatttctctactgtaatagatccagtcaaattctatgaatgcaatgttcttgccatagttgatcagacaagaaaatcttgttgcttgttgtaccaaaaagaattattttaacatgctttgaattcttctcacagaagctattgactgtttcatgcctatatatgttcgttgcagttttggacagaatcatcacctaactttatttagattttgatcttgccattttgaactttgagtaccatattattgttgaagcagcacagtagcatcatttctgtctgtcatgtgggcttttgttggaatgtcaggaaattgatcagcctgccttgatacctcacatagctgaagccaagtctcaaaaatatccatatgaagttcttttcagaagcttgcaaaaacttttgattgatacagctacttcagagtaagcctgatttcccttgtatttttattcgtaatggcttttgaatgagtggcaacctgatagatatccactaactgcaggtaccttttctctgatgatttctttggtgaagaatcactgtttaatgacatatttgcaggtttgttttgtcctatttttgaatgtctatcttatgtggatgtagtaatctaaatggagaagcatctagtgtaaatccatcgctcagttctagcatgtgaatgaacattcatatttaccatttgatgaggtttggatggatcagatttaaagggatgtgacgggacactcataaatgatggctcaaaccgcaaggcagttattatttgtaaatagtggtccatgtggctattacatcctgtttggatctgatccacctaaaattatgaatcaacccagatggagttggcattttagaacctgaagttcaaagatgcgtagatactcccccaaaccgcttttacatcgtcctttacccgtaggaagcacaatgcgtgcaaagactaccatacatttatatgcctgtttttgctggtcatactattgagacatactttgatcaatattgttctgccacagtggcttgaataactaccatacatttagtttgtcaaggccaatcttaattcagatgttttgtggttaccctgatttaaattttgctgaaaattaaaagtccagtctttgttatgaacatttctggctgagcaagtgagcataactcttctcagtcatttagaaaatgtgcaggatgagatttcaggagttgatagaaaatgagaatatgctttgcattacactagtaaccaaagtaatatactatctgttcattttatttaactttaggaaataatccatttattttatcatgtctgacatataaatgctccatgtcatagataatccaaactgattaattgaatatatcaagtcaagccattttatactattaccactgtcatctacctgaaaatagacaatgaatatgtgttttaaatgtttaacataaacatcaaacaagtgatgtctgttacttttcccttaggacctatccaagttgttgatgaacatttcaatgctgtgctcctgaactgttatgacgcaatcggcataatgcttatgatccgaataattcatcagcatcaggtacgctttgagttacctattgaagcagcttagaaatatcaccattcatgcccttgttgactgtccttgctttgaaggaggccacatctctctctctctctctccattttaggtagaaccctttatattgttatatgtgagaaatctaagtggaattgatgttttatgcagctaatcatgtttaagcggcgaatcccatgtttggactcttacttagacaaggtgtgtgctttgtcgcatttttgttgaaattttatacttgtatcgacttttttaagggtcactatgttggatagccaatgcttcgccatgaatctttcttttgtttcaaattcatcaagtccatttgtgcacattgcacacttgcacaggttaacttatcactctggcctcgcttcaagatggtgtttgatttgcatttgaacagcttacgaaatgcaaatgttaagactctttgggaggatgatgttcatcctcactatgtcatgaggagatatgctgaatttacagcatccctcgtgcatctcaatgttgaatatggagatggtcaggttagtttatcaaattcaactcaacccgatttctgaaaagaattattgattcccattccatgcgataagcaacccctttatatggcttatgggaattgtataatgttatttatatctgcagcttgatcttaatctcgagcggttgcggatggctgttgaggaattgcttgttaagttggctaagatgttccctaaacaaaagttgcaaactgttttcctgataaacaactatgatttaacgatttccatactgaaggtaggcggtgaaagttcaagcttcattaagttgtactgtggtgcaatctactagtatcatcttattaaatttgttctgagctgtcatacaggaagctggcactgagggtggaaaagcacaagttcactttgaggaggttcttaagagcaatatttcagtatatgtggtatgcaatgtgccctctgagatagaaataatggaatataatttctgcgtgggcacatttcattggttttactgtgttagggggtacctgtttgcatctgtttaggggctatttggttgcatcctaacttgccagggcaccaaaccgtgatgtgttgtgtgaccacttgccgtttgtcctagtctatttattttagtacgacctctgtattttccatttgattctagaatttttacatgtccagagaaaatagtgggaggcctactgtcagtttagtatttcttttcttaggattacgaagccaatcagaggctagtcccattgatttttaatactggcaacagatgtccattttttctcctttcgtttgaactttattgacaatatttgtaaagagggagctgtgtggatagttaaaattttctaggggtaagctgatataatgaacaaatatttatgcaggaggaacttctactggagcatttcagtgatttgatcaaatttgtgaaatctcgcccgtgtaagttgatccctgttacaacatcaagctggttcctttttttgcaacggcatctcatctttatgtgtgtgttttaccagctgaagacacagcatcaagctcggacaaggccagtgttagtgatgtcgagccattagtcaaggattttgccggtcggtggaaagctgcaattgagcttatgcacaaggatgtcattacatcttttagcaacttcctctgcggaatggagatcctgaaagcggcactcacgcagctgctgctgtactatacaaggatcaccgagtgtgtcaagaagatcaatggtggctctgctctcaacaaggacctggtttccatatcctctatcttatatgagatcaagaaatactccaggaccttttagtcagtactggtcctgccatgtacactggtgtattattctcatgtaacgaaaatcctgatatatgctatgcaggttggttgggtttgacacggaactctgtttctcttgctatttggcagatgttaagaaattacacgggggtgtatctaaaatagtttttcgattgagagtaatggctgtttgtggtagatcgttgagctgattagcgattagctgcctatcagtcagccattcagatgttctttaattgtagtcatagccattcagatgttctttaattgtctggcggtgtttgggaccgtagaaacttatccccgcctgtggataagtgaatagaaacacataaattttgcc</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056907.1 RefSeq:Os03g0417900]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 3]]
 
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[[Category:Chromosome 3]]
 

Latest revision as of 07:20, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

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Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information