|
|
| (One intermediate revision by one other user not shown) |
| Line 1: |
Line 1: |
| − | {{JaponicaGene|
| + | Please input one-sentence summary here. |
| − | GeneName = Os03g0731500|
| |
| − | Description = Similar to Major surface glycoprotein-like|
| |
| − | Version = NM_001057700.1 GI:115455128 GeneID:4334001|
| |
| − | Length = 9561 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0731500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| | | | |
| − | ORGANISM Oryza sativa Japonica Group
| + | ==Annotated Information== |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| + | ===Function=== |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| + | Please input function information here. |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| + | |
| − | |
| + | ===Expression=== |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| + | Please input expression information here. |
| − | AP = Chromosome 3:30700280..30709840|
| + | |
| − | CDS = 30700690..30700755,30701202..30701561,30701641..30701781,30701958..30702090,30702390..30702503<br>,30702599..30702747,30704861..30704953,30705065..30705125,30705226..30705558<br>,30706144..30706270,30706368..30706467,30707346..30707415,30707495..30707647<br>,30708033..30708128,30708401..30708717,30709232..30709456|
| + | ===Evolution=== |
| − | GCID = <gbrowseImage1>
| + | Please input evolution information here. |
| − | name=NC_008396:30700280..30709840
| + | |
| − | source=RiceChromosome03
| + | You can also add sub-section(s) at will. |
| − | preset=GeneLocation
| + | |
| − | </gbrowseImage1>|
| + | ==Labs working on this gene== |
| − | GSID = <gbrowseImage2>
| + | Please input related labs here. |
| − | name=NC_008396:30700280..30709840
| + | |
| − | source=RiceChromosome03
| + | ==References== |
| − | preset=GeneLocation
| + | Please input cited references here. |
| − | </gbrowseImage2>|
| + | |
| − | CDNA = <cdnaseq>atggaggacagggcgtcgcccggcggaggcgtgtgcgggagggtgcttcggctcgcgagcgtccagattattttgattctgttcttgactcaaggagcctgctcgagttcccgtgacggcaaaacatcgcctcctcaaggcctggatgctggggagaaggacatttaccttagccattcttgcattcatgatgaaatacttcatcagcggcgacgagcctggcggaaggagtactctgtcatgcctcaagtctaccatgaacgcagagagaacatggaacggctaagaggaagacacttgctgggggtgtcatcttggcatgcttcacagaagaatgtcaaaaagccaatacggatttatctcaactatgacgctgttgggcattcacctgacagggactgtaaaactgttggtgacattgttaagctcggggaacctcctgttccatcaataccaggaacacctgtctgtgatcctcatggagacccaccattggtgggagattgctggtacaattgcaccgttgaggatatagccggggaggacaagaagcaaaggcttcgaaaggcactgggacagacagtagagtggttcagaaaagccttagctgttgaacctgtcaaagggaaccttcggctcagtgggtactctgcttgtggtcaggatggaggtgtacagctcccccatgcatatattgaagatggcgttgccaatgctgatttagtactcctggtaacaactagaccaacaacaggtaacacccttgcatgggctgtggcctgtgaacgtgaccaatggggccgtgcaattgcaggacatgttaatgtggccccccgtcatttgaccgctgaagcagaaacgttactttcagccaccttgatacatgaggtcatgcatgttctaggctttgatcctcatgccttcacacattttcgtgatgaaaggaaacggaggcgtagtcaggtaacttctcaaattttggatgaaaagcttggaagaatggtcacacgtgttgtccttccacgggttgtcatgcactctaggcatcattatggagcgttttcccaaaacttcactgggttggaactggaagatggtggaggcaggggtacatcaggttcacattgggagaaaaggctcttaatgaatgagatcatgactgggtcagtggatacaagatcagtggtgtcaaagatgactttagcattactggaggacagcgggtggtatcaagctaattatagcatggctgagcatttagattggggtcgcaatcagggaacagagttcgttatctctccctgcaatttatggaaaggggcataccgctgcaacacaactcagttatcaggatgcacatataatagggaggcagaaggttactgccctatagtaagctatagtggggacctgcccaaatgggctcaatatttccctcaagctaataaaggtggccagtcttcgttagcagattactgtacatattatgttgcttattcagatggttcgtgcactgatgtaaatagtgcacgagcacctgacagaatgttaggtgaagtgcggggaagcaactcaaggtgtatggcctcaactctagtgcgaactgggtttgttcgcggatctatgacacaaggaaatggctgttatcagcatcgctgcacaaataactccttagaggttgccgttgatgggatctggaagtcatgtccgcaaactggtggacctgttcagttcccagggttcaatggggagttgatttgcccggcatatcacgagttgtgtaacaccgtgccagttccagtaagtggccagtgtcccaagtcttgcagttttaatggtgattgcattgatggaacctgccattgcttccctggatttcatggccacgactgtagcagaagatcttgcccagccaagtgcacaggtcatggtatatgcaaagccaatgggatctgtgaatgtgaaagtggatggactgggattgactgctcaacagcggtttgtgatgagcaatgtagtttgcacggaggagtctgtgataatggtaaatgtgaattccgctgttcagattatgcaggctacacttgtcagaaaggttctgcaatattgcccagcttgtcaatgtgccatgatgtactggttagggatgctgacgggcagcattgtgcaccaagtgaactcagtattctacaacagcttgaagcagtggttcttgtgccaaattacaataggttgatgccaagtgggcggaccttccttaacttctttaacaatgccaactgtgcagcagctgcaaagcggttagcctgctggatctcgattcaaaggtgcgacgaagatggggataaccgacttcgggtatgctactctgcatgtgagttgtacaatacagcatgtggggcgggtcttgattgctcggaccagaccctgtttagcaagagggaagaagaggaaaagggtgttccgtgcacaggatatggcgagaagaagtctttctggctaatgactataacttccccgggcgtttcttccctctga</cdnaseq>|
| + | ==Structured Information== |
| − | AA = <aaseq>MEDRASPGGGVCGRVLRLASVQIILILFLTQGACSSSRDGKTSP PQGLDAGEKDIYLSHSCIHDEILHQRRRAWRKEYSVMPQVYHERRENMERLRGRHLLG VSSWHASQKNVKKPIRIYLNYDAVGHSPDRDCKTVGDIVKLGEPPVPSIPGTPVCDPH GDPPLVGDCWYNCTVEDIAGEDKKQRLRKALGQTVEWFRKALAVEPVKGNLRLSGYSA CGQDGGVQLPHAYIEDGVANADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNV APRHLTAEAETLLSATLIHEVMHVLGFDPHAFTHFRDERKRRRSQVTSQILDEKLGRM VTRVVLPRVVMHSRHHYGAFSQNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDT RSVVSKMTLALLEDSGWYQANYSMAEHLDWGRNQGTEFVISPCNLWKGAYRCNTTQLS GCTYNREAEGYCPIVSYSGDLPKWAQYFPQANKGGQSSLADYCTYYVAYSDGSCTDVN SARAPDRMLGEVRGSNSRCMASTLVRTGFVRGSMTQGNGCYQHRCTNNSLEVAVDGIW KSCPQTGGPVQFPGFNGELICPAYHELCNTVPVPVSGQCPKSCSFNGDCIDGTCHCFP GFHGHDCSRRSCPAKCTGHGICKANGICECESGWTGIDCSTAVCDEQCSLHGGVCDNG KCEFRCSDYAGYTCQKGSAILPSLSMCHDVLVRDADGQHCAPSELSILQQLEAVVLVP NYNRLMPSGRTFLNFFNNANCAAAAKRLACWISIQRCDEDGDNRLRVCYSACELYNTA CGAGLDCSDQTLFSKREEEEKGVPCTGYGEKKSFWLMTITSPGVSSL</aaseq>|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | DNA = <dnaseqindica>411..476#923..1282#1362..1502#1679..1811#2111..2224#2320..2468#4582..4674#4786..4846#4947..5279#5865..5991#6089..6188#7067..7136#7216..7368#7754..7849#8122..8438#8953..9177#gtggtactagtagccttcacgactaaatccaccaccactacgcctccacctccacacctcacctcctccacctccccgcgtctccgcctcctccatcctctctctctcctcctcgcggggggttgggctgctcctcgtcggcgtcgcggaacctaatcctgcctcgatctgcggcgagccggagccggcggcgcggaggcgagtgggtgggtggtggtccagtgcggtggtgcggtgggggccagcctggtggtccccgtctcggcggcggtgcggcgcggcggaaggaggaggggtggtggattcgtagggggggtggtgaggtggaggaggatgggtgcggcgggggcgtcgcccgaggggcggtgaatggaagcggcgaggggggctggggctgcgggcggccgtacatggaggacagggcgtcgcccggcggaggcgtgtgcgggagggtgcttcggctcgcgagcgtccaggtgagccgcttcgttcgatccggtgggaggggttcggttggtgagcgggctgtgttcgcagatttcgtgcggagtggtcggggaatttcgcggggtttgaggctgccgtggccggatttggtatcaatttgatgcgcattttaggttatggagtgcgattcgatagattcgcggcttgctctggtgttgtagggttttaccgttttgcttcggatatttttgggggaagggaatgttgttgtcccttccatttttgggaattttgacggtagttaaacagatggaaatagattgatcaaaatttagactgcactagtagattacatgctgtttgctcttacagtttgctaatattcgagttctcttaggtcaccgtggtctattagaagactctgtacttgcgctggtgtctgtaattgattattccatgtttgctcatgctgcagattattttgattctgttcttgactcaaggagcctgctcgagttcccgtgacggcaaaacatcgcctcctcaaggcctggatgctggggagaaggacatttaccttagccattcttgcattcatgatgaaatacttcatcagcggcgacgagcctggcggaaggagtactctgtcatgcctcaagtctaccatgaacgcagagagaacatggaacggctaagaggaagacacttgctgggggtgtcatcttggcatgcttcacagaagaatgtcaaaaagccaatacggatttatctcaactatgacgctgttgggcattcacctgacagggactgtaaaactgttggtgacattgttaaggtaggtttagcttttgattgtgctggcagctgcttcaccggcgaagtatattgttaagtttgttgtttgttcatgttagctcggggaacctcctgttccatcaataccaggaacacctgtctgtgatcctcatggagacccaccattggtgggagattgctggtacaattgcaccgttgaggatatagccggggaggacaagaagcaaaggcttcgaaaggttcatttttctgccttctgtggtttctgcctgccacttcagtttgcactccatcatgacttgaaaatatgatctgccaatgatcttaagtcttgactgtgatggaagatgtagtaatgctagtcccttgtgttattgatatctttgtttttatgctgaatcggaccattggacaggcactgggacagacagtagagtggttcagaaaagccttagctgttgaacctgtcaaagggaaccttcggctcagtgggtactctgcttgtggtcaggatggaggtgtacagctcccccatgcatatattgaaggtaatttaccattattactagggatagcaatggggacctttttcttgccaacccagaggagttcttctattagagggatgggggaatttttttccattgccattctacgtgaggatggggacagtatgcctccctgtctccactccttgccatatctctgacatgtgctcatataccaatgtaaatcgatgtgtctacacatccaaaacttgcgtgttatccctttaccatcactagcatatgtgtctatacatccaaaaattgctacttatttcatacatttctttcttaaattgcagatggcgttgccaatgctgatttagtactcctggtaacaactagaccaacaacaggtaacacccttgcatgggctgtggcctgtgaacgtgaccaatggggccgtgcaattgcaggtctgtgtaaatcctcacactttatatactaacatcacacgtgcggggtgtttttaatgttaatttgaactaacatatgtgattttttcctttaggacatgttaatgtggccccccgtcatttgaccgctgaagcagaaacgttactttcagccaccttgatacatgaggtcatgcatgttctaggctttgatcctcatgccttcacacattttcgtgatgaaaggaaacggaggcgtagtcaggtacttagcaatgtctttcctcattgttttagtgtgatatattttctttccttcacatggagattcaacgcccaaaacctgagctgatccttttatggttgaaatctcagccgattcaatttctttatttaaagcttcttaaagaagcaactcaattggatgtatatgctgattttaggcaaaggcacaaaggcccctaagtttctgttgttaccatattgggcaattatctcactgtggcaaatcttggcatgtgtggtcaaataaactccaaaggtgcaatggaatatttcttgatgctttcagattgttgagagcatggatttgatacctcttcaaaagtcttataaatgggattaagttgcacgattactgatgcctacaatcctacatgcctagcgggacattggaattagctggacaaaagatgattttaatttgtaatttgaggaaagatacagcacatcgatgaacaatctaatcaaccaaccactgttcagaaatcaacccggacaacagtgcttgtagatgagtgtgaatttggagaattgtatgtgttctactcaaatcaatccccagaagcctgaagaacaacatttcaactataaattctactctatagtaatacgtaaatatgatccttatacgcactcttgaactcctattgcctccttggggctattattcaatacaaattatattcatagcagtcccgaccttagatttcttaaaactatgaactctaggccctaatggcctcattctttttggtcaactagtatgtgcagtaacagaaagctaatcttgaaagacaatttcaagctcttatggcctgtttgacaagtcggttgtaagacgtgtgattgggataacggaaggagcaaagggttagaatgaaatgaggcgggaataatggatggctaggataagaatggatgggctaggcaatgttaccctttgatgggtggtatgtcatttccctatcccatttgccaaacttgcccttaaggctcaaaattgtagaaggaagtaactctgaaatggaaataaataaacttcatctaattttctatagcttgtggtcccgcattggatgattgaggatttacaaggctggactttgacaagttgtgctcagttttgtattatacccccttcttgtcaacttttcgcttgttctcttttccattctgtagaatttgggttcaactagttaaatacttgtgcgttgcactgaaatagatagatatttcataatctagctaagtttacaaaactcatggttgtttgtagaccttgtttggataacaccttgtatttcaaagtggaggatatgacaaagaactaatttgctccttagtatcctccttatgttccttacctcgaaagactaagaagaaacaaacatagctatatgggccgcctagcaatcaaagatggctggaggaggagaggcccaaaaggaggctgaccatggctccacttgttaggttggcgacggtggtggaagatcacgtccaccactgcttccttcttttagatcatataaaggtttttcttcatctgactaatccacctgtagctggcaactcaaacccaataccctttatggttaatttgacgagctgtgtagagagtacagtttcatgtagaggatgcaaatcaatgaaaccccacaacatactacgttacaaactcaaccaacaactttattgtttagtggttgtgttgccacgagaggtcctagtatatttttccaagttggattatttacttaagacgttgtgctaaaagcaaataactttttatgggctctagttagctatatcatccagtttatttattcattttgagggggaagggggggggggtggtctatgcaaaatagcatagttggcatacctccaaaacttgagtgaaaagctttggagataatgcaacatggtttttgttctgcaccaattcttcaaccagtagataactaaccagtttctctagtccaaaatttattatctgcctactgcattggtaagttgggtagcttgaaagcttcccctctctagttcatgccttgcacacgatgatctgagtgtattcatgtgtctttcttcaggtaacttctcaaattttggatgaaaagcttggaagaatggtcacacgtgttgtccttccacgggttgtcatgcactctaggcatcattatggagtaagttgtaactaaagatactggagctttcttaaatctgctagtcatttcttaacttttactttgagaaaaagtattcatttaaattgatcgatttcttggttgtgctaggcgttttcccaaaacttcactgggttggaactggaagatggtggaggcaggggtacatcaggtacacccatataatttgatatttgtactgttggcatcataaaggttcaagaataactgtgtgttttttccctccctactgagatttgccatatttacaggttcacattgggagaaaaggctcttaatgaatgagatcatgactgggtcagtggatacaagatcagtggtgtcaaagatgactttagcattactggaggacagcgggtggtatcaagctaattatagcatggctgagcatttagattggggtcgcaatcagggaacagagttcgttatctctccctgcaatttatggaaaggggcataccgctgcaacacaactcagttatcaggatgcacatataatagggaggcagaaggttactgccctatagtaagctatagtggggacctgcccaaatgggctcaatatttccctcaagctaataaaggtatggttatgatacaatatgtgatgatttagtttgattttattgttagtaacatttgacagagtgctgaaatgatatttggaattttaagtggctcatctttctgttttgaccttttccatttgatccctagtgggttggcttgtagatcaaggcgggtggtgtaaattaaggggaaggtgaaatgaataatattgcttatttgcacataatgcccagttgttaatataggatatcccctgtccacacgcatggaacaactcctagaaaaggaacaaaaataagtgtagaaagtttcttttgtcttttgctactgtttgcctaaagattacccagtcacaagcaggttggattaccttgttagaggtgatctgactgagctctagatgggatcacttttggaactgtcaactgtctctggagttaatcaaatgagtcttcctgggagtttcctatcaagttctcatattccacaagagccctcatcttttcttattctcttcttgagtacccttgattggtttcttatttcagcaaatagtactaaagtgctcacctatgtggaactggattctatgcatgtaggtggccagtcttcgttagcagattactgtacatattatgttgcttattcagatggttcgtgcactgatgtaaatagtgcacgagcacctgacagaatgttaggtgaagtgcggggaagcaactcaaggtgagactgcagacaataagttctatcatacttgttttactacatatcagtttacagttttaattcgtgatggaagttttgcttcactaatgagcaggtgtatggcctcaactctagtgcgaactgggtttgttcgcggatctatgacacaaggaaatggctgttatcagcatcgctgcacaaataactccttagaggttagtaccactcccttcttccttagtttatcagtcgtatcttttttctcaagagtaaccatacatgatctgaagcccaccaaaccttgttagaggaatgagaatttctagcccattcgcccttttcactatgagcttttaacaaagcattttaattttttggtgattactctctttatcgagaaaatattttgttgaattttgattttgcgtgagtaagttcgtggtgaaaatgggaacaccagataaaatgacttgatggcattcgtattgtcttgtaagataaaataaattgcttttttttggcggtcatgaataaatgcatactccctccagtaaaaggatacttgatggttgacgcttttcatggtcgttgaggtgtgccctttgaccacaattttatattaaattacttttataaaatctaataaatttatgggattatgaaagtacttatcatggcaaatctacagatagcaatttgtatggtttttaattaaatatgtagaagtcactgatggtcggtttcaatagtgtgatctgaggaggtataataatcacagaaataacaaataggggcatagtaggaaaaaccattaaacatgcatgcaaaccttatatttaagaacaaaaccattgaaaccacagtcattatatctctcgccagatgtattaaataataaatttggttctttgaactgtcttagttgttttatattctttttgggctacatgcttatgctgtttgtgtctatattggctgcatcagatttgtccaagtaacctcatgcatcatattctattttggttcagaaattctgctcagctctggctaaactttgccatttgtggtgttcaaaaaaattattgatgtttaggttgccgttgatgggatctggaagtcatgtccgcaaactggtggacctgttcagttcccagggttcaatggtgagtcttgttatttgatgtgtattatatcagaactctcttcttttgtttcttacttgagtaaatttcgttgctgaaggggagttgatttgcccggcatatcacgagttgtgtaacaccgtgccagttccagtaagtggccagtgtcccaagtcttgcagttttaatggtgattgcattgatggaacctgccattgcttccctggatttcatggccacgactgtagcagaagtgagttctatgtctatgctatccttccgttttcatccaacttttttcttctccatctgttaagccttttcagcacaggttttccaatcttgtattcaaaagatttatggataagctggatattgaagtggaatatttttagagaagtggtcaagcatccttttgaaagtagtagtttataattgtatgcttcatatatatacatttatcaatattatgaacaatctgttggttcttgtggagcttcaattgagtgaagaggacaatggatttttgtagcccttggtgggccccttcaaaattggctggattgcttttctgatatgctgaagtatccattctgttatagtttggtctcactgactaccattggtttggtgtgcaggatcttgcccagccaagtgcacaggtcatggtatatgcaaagccaatgggatctgtgaatgtgaaagtggatggactgggattgactgctcaacaggtgaacttaatgaatactgaagttttctgttaaaaacatgaagatgaactcactaattttctttgtgtttgattcgtgaaaactagtcacactaggttttaatgcatttgaatttcttatgaaaatgtgctttgccatacatgatcagatttgagcacttaaaacttgcaattgagttttattatgttggagccttgaacgccttacaatttattatatgttttagaattgatgattgctaaaactaatgtcatgtttcttttttaatgcagcggtttgtgatgagcaatgtagtttgcacggaggagtctgtgataatggtaaatgtgaattccgctgttcagattatgcaggctacacttgtcagaaaggttctgcaatattgcccagcttgtcaatgtgccatgatgtactggttagggatgctgacgggcagcattgtgcaccaagtgaactcagtattctacaacagcttgaagcagtggttcttgtgccaaattacaataggttgatgccaagtgggcggaccttccttaacttctttaacaatgccaactgtgcagcagctgcaaagcggttagcctgctgggtatggcctgcttcaaccatttctcaaatatttatatatcttgcgaactcgttctgatctttagatgttctatcttcagcttgcatacacgttatgaggttttgtttgtccgcattgctgtttttgcctttaaacaagcatagtatattaagagcacagcttacttgtagcaaatatacatatatacaagaaagaagcatgtattattttgttagaacatagtgaaaggaatcctccaagttcaatgtcacggatctgcattgcctgttataacacgattgcatttttagaaataaacactgaattctgcatcgagtataagatcatctagccccatttcactgagcaggagatttgtctagtttacttacgccaaatactagtgatatttaaaccaattgtctttttgtcaatgccctcattatctctatatatccatacggattcatcttgttttactgttgagagcaataatttgtggagaagtaataccttcctaaatttctttcttcagatctcgattcaaaggtgcgacgaagatggggataaccgacttcgggtatgctactctgcatgtgagttgtacaatacagcatgtggggcgggtcttgattgctcggaccagaccctgtttagcaagagggaagaagaggaaaagggtgttccgtgcacaggatatggcgagaagaagtctttctggctaatgactataacttccccgggcgtttcttccctctgatatctccatctgcggctcggagattgtgtaaagtataattggcgatgtcctatccatattcattttctcttttctttttggccaccactttccaattgtaggatacgggaagtagtggcccatttcacctgggcacctgaagatgggtgcctggtgtataagcagtgttggagcgggctctgtgtgtttaggaagttagtctgactggaaggagggtggagtgagaagctggaggcgggcggtagatttattttttaccttttttttttgtcgcgtcagagttagcggaggaatgtaaagtgtaatgtgtgttgtaatcccatgacccatctaacaaacagagcatctcaatgagagccccctatgttgtcttgtgtgttcagc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001057700.1 RefSeq:Os03g0731500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
| |
| − | [[Category:Chromosome 3]]
| |
